RNA–Protein interactions for RNA: ENST00000394164.5

PSEN1-204, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-204ENST00000394164 CCDC125Q86Z20 511 aa10.47□□□□□ -0.73
PSEN1-204ENST00000394164 C12orf56Q8IXR9 622 aa10.47□□□□□ -0.73
PSEN1-204ENST00000394164 REPS2Q8NFH8 660 aa10.47□□□□□ -0.73
PSEN1-204ENST00000394164 SLC7A3Q8WY07 619 aa10.47□□□□□ -0.73
PSEN1-204ENST00000394164 DDX1Q92499 740 aaKnown RBP10.47□□□□□ -0.73
PSEN1-204ENST00000394164 MFSD14AQ96MC6 490 aa10.47□□□□□ -0.73
PSEN1-204ENST00000394164 SPATA16Q9BXB7 569 aa10.47□□□□□ -0.73
PSEN1-204ENST00000394164 APOBEC3GQ9HC16 384 aaKnown RBP10.47□□□□□ -0.73
PSEN1-204ENST00000394164 GRID1Q9ULK0 1009 aa10.47□□□□□ -0.73
PSEN1-204ENST00000394164 A0A0G2JND7 137 aa10.46□□□□□ -0.73
PSEN1-204ENST00000394164 P4HA2O15460 535 aa10.46□□□□□ -0.73
PSEN1-204ENST00000394164 OR6B1O95007 311 aa10.46□□□□□ -0.73
PSEN1-204ENST00000394164 PSMG1O95456 288 aa10.46□□□□□ -0.73
PSEN1-204ENST00000394164 SUPT20HL2P0C7V6 817 aa10.46□□□□□ -0.73
PSEN1-204ENST00000394164 FUT4P22083 530 aa10.46□□□□□ -0.73
PSEN1-204ENST00000394164 AMPD1P23109 780 aa10.46□□□□□ -0.73
PSEN1-204ENST00000394164 CHRNA3P32297 505 aa10.46□□□□□ -0.73
PSEN1-204ENST00000394164 COILP38432 576 aaPredicted RBP10.46□□□□□ -0.73
PSEN1-204ENST00000394164 SLC34A1Q06495 639 aa10.46□□□□□ -0.73
PSEN1-204ENST00000394164 STXBP2Q15833 593 aa10.46□□□□□ -0.73
PSEN1-204ENST00000394164 SUPT20HL1Q3ZLR7 823 aa10.46□□□□□ -0.73
PSEN1-204ENST00000394164 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.46□□□□□ -0.73
PSEN1-204ENST00000394164 C11orf63Q6NUN7 778 aa10.46□□□□□ -0.73
PSEN1-204ENST00000394164 IZUMO2Q6UXV1 221 aa10.46□□□□□ -0.73
PSEN1-204ENST00000394164 RIBC1Q8N443 379 aaPredicted RBP10.46□□□□□ -0.73
PSEN1-204ENST00000394164 PDCD7Q8N8D1 485 aaKnown RBP10.46□□□□□ -0.73
PSEN1-204ENST00000394164 MCPH1Q8NEM0 835 aa10.46□□□□□ -0.73
PSEN1-204ENST00000394164 PPP1R13LQ8WUF5 828 aa10.46□□□□□ -0.73
PSEN1-204ENST00000394164 TTC1Q99614 292 aa10.46□□□□□ -0.73
PSEN1-204ENST00000394164 TIPINQ9BVW5 301 aa10.46□□□□□ -0.73
PSEN1-204ENST00000394164 FER1L6Q2WGJ9 1857 aa10.46□□□□□ -0.74
PSEN1-204ENST00000394164 BRCA2P51587 3418 aa10.46□□□□□ -0.74
PSEN1-204ENST00000394164 MIF4GDA9UHW6 222 aaKnown RBP10.46□□□□□ -0.74
PSEN1-204ENST00000394164 GYG2O15488 501 aa10.46□□□□□ -0.74
PSEN1-204ENST00000394164 ATP5HO75947 161 aa10.46□□□□□ -0.74
PSEN1-204ENST00000394164 VNN1O95497 513 aa10.46□□□□□ -0.74
PSEN1-204ENST00000394164 CST3P01034 146 aaPredicted RBP10.46□□□□□ -0.74
PSEN1-204ENST00000394164 WEE2P0C1S8 567 aa10.46□□□□□ -0.74
PSEN1-204ENST00000394164 SETSIPP0DME0 302 aa10.46□□□□□ -0.74
PSEN1-204ENST00000394164 KRT10P13645 584 aa10.46□□□□□ -0.74
PSEN1-204ENST00000394164 PTPN4P29074 926 aa10.46□□□□□ -0.74
PSEN1-204ENST00000394164 IGBP1P78318 339 aa10.46□□□□□ -0.74
PSEN1-204ENST00000394164 KRT17Q04695 432 aa10.46□□□□□ -0.74
PSEN1-204ENST00000394164 TMED1Q13445 227 aa10.46□□□□□ -0.74
PSEN1-204ENST00000394164 CLEC16AQ2KHT3 1053 aa10.46□□□□□ -0.74
PSEN1-204ENST00000394164 CATSPERGQ6ZRH7 1159 aa10.46□□□□□ -0.74
PSEN1-204ENST00000394164 NLRP9Q7RTR0 991 aa10.46□□□□□ -0.74
PSEN1-204ENST00000394164 CROCCP2Q86T23 111 aa10.46□□□□□ -0.74
PSEN1-204ENST00000394164 TRIM42Q8IWZ5 723 aa10.46□□□□□ -0.74
PSEN1-204ENST00000394164 THNSL1Q8IYQ7 743 aa10.46□□□□□ -0.74
PSEN1-204ENST00000394164 SLC25A41Q8N5S1 370 aa10.46□□□□□ -0.74
PSEN1-204ENST00000394164 INPP5DQ92835 1189 aa10.46□□□□□ -0.74
PSEN1-204ENST00000394164 GATA6Q92908 595 aa10.46□□□□□ -0.74
PSEN1-204ENST00000394164 ART4Q93070 314 aa10.46□□□□□ -0.74
PSEN1-204ENST00000394164 OTUD5Q96G74 571 aa10.46□□□□□ -0.74
PSEN1-204ENST00000394164 HIC2Q96JB3 615 aa10.46□□□□□ -0.74
PSEN1-204ENST00000394164 RUNDC3BQ96NL0 473 aa10.46□□□□□ -0.74
PSEN1-204ENST00000394164 SERPINB12Q96P63 405 aa10.46□□□□□ -0.74
PSEN1-204ENST00000394164 PHF12Q96QT6 1004 aa10.46□□□□□ -0.74
PSEN1-204ENST00000394164 KRT82Q9NSB4 513 aa10.46□□□□□ -0.74
PSEN1-204ENST00000394164 ARL8BQ9NVJ2 186 aa10.46□□□□□ -0.74
PSEN1-204ENST00000394164 CLIC5Q9NZA1 410 aa10.46□□□□□ -0.74
PSEN1-204ENST00000394164 BTBD7Q9P203 1132 aa10.46□□□□□ -0.74
PSEN1-204ENST00000394164 PARP2Q9UGN5 583 aa10.46□□□□□ -0.74
PSEN1-204ENST00000394164 GTF3C4Q9UKN8 822 aa10.46□□□□□ -0.74
PSEN1-204ENST00000394164 MTUS1Q9ULD2 1270 aa10.46□□□□□ -0.74
PSEN1-204ENST00000394164 NUB1Q9Y5A7 615 aa10.46□□□□□ -0.74
PSEN1-204ENST00000394164 PASKQ96RG2 1323 aa10.46□□□□□ -0.74
PSEN1-204ENST00000394164 KIF13BQ9NQT8 1826 aa10.45□□□□□ -0.74
PSEN1-204ENST00000394164 CCDC160A6NGH7 325 aa10.45□□□□□ -0.74
PSEN1-204ENST00000394164 DCTN3O75935 186 aa10.45□□□□□ -0.74
PSEN1-204ENST00000394164 STK10O94804 968 aaKnown RBP10.45□□□□□ -0.74
PSEN1-204ENST00000394164 ATP5DP30049 168 aa10.45□□□□□ -0.74
PSEN1-204ENST00000394164 GNA15P30679 374 aa10.45□□□□□ -0.74
PSEN1-204ENST00000394164 YARSP54577 528 aaKnown RBP10.45□□□□□ -0.74
PSEN1-204ENST00000394164 CCDC15Q0P6D6 951 aa10.45□□□□□ -0.74
PSEN1-204ENST00000394164 PABPC1LQ4VXU2 614 aaKnown RBP10.45□□□□□ -0.74
PSEN1-204ENST00000394164 XKR3Q5GH77 459 aa10.45□□□□□ -0.74
PSEN1-204ENST00000394164 KLRG1Q96E93 195 aa10.45□□□□□ -0.74
PSEN1-204ENST00000394164 DTNBP1Q96EV8 351 aa10.45□□□□□ -0.74
PSEN1-204ENST00000394164 MPP4Q96JB8 637 aa10.45□□□□□ -0.74
PSEN1-204ENST00000394164 PCDHGA4Q9Y5G9 962 aa10.45□□□□□ -0.74
PSEN1-204ENST00000394164 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.45□□□□□ -0.74
PSEN1-204ENST00000394164 MROH7Q68CQ1 1323 aa10.45□□□□□ -0.74
PSEN1-204ENST00000394164 MYH9P35579 1960 aaKnown RBP10.45□□□□□ -0.74
PSEN1-204ENST00000394164 COL11A1P12107 1806 aaPredicted RBP10.45□□□□□ -0.74
PSEN1-204ENST00000394164 SPATA31C2B4DYI2 1134 aa10.45□□□□□ -0.74
PSEN1-204ENST00000394164 ADM5C9JUS6 153 aa10.45□□□□□ -0.74
PSEN1-204ENST00000394164 PODXLO00592 558 aa10.45□□□□□ -0.74
PSEN1-204ENST00000394164 OATP04181 439 aa10.45□□□□□ -0.74
PSEN1-204ENST00000394164 CYP1A2P05177 515 aa10.45□□□□□ -0.74
PSEN1-204ENST00000394164 RALAP11233 206 aa10.45□□□□□ -0.74
PSEN1-204ENST00000394164 GZMAP12544 262 aa10.45□□□□□ -0.74
PSEN1-204ENST00000394164 ATF7P17544 494 aaPredicted RBP10.45□□□□□ -0.74
PSEN1-204ENST00000394164 UBA1P22314 1058 aaKnown RBP10.45□□□□□ -0.74
PSEN1-204ENST00000394164 RPL7AP62424 266 aaKnown RBP10.45□□□□□ -0.74
PSEN1-204ENST00000394164 TFAMQ00059 246 aaKnown RBP10.45□□□□□ -0.74
PSEN1-204ENST00000394164 TTLL12Q14166 644 aaPredicted RBP10.45□□□□□ -0.74
PSEN1-204ENST00000394164 LCA5Q86VQ0 697 aa10.45□□□□□ -0.74
PSEN1-204ENST00000394164 APLFQ8IW19 511 aaPredicted RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms