RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 SAE1Q9UBE0 346 aaPredicted RBP11.4□□□□□ -0.58
BRF1-204ENST00000392557 ZMYND8Q9ULU4 1186 aaPredicted RBP11.4□□□□□ -0.58
BRF1-204ENST00000392557 NAMPTP43490 491 aa11.4□□□□□ -0.58
BRF1-204ENST00000392557 SMAD1Q15797 465 aaKnown RBP11.4□□□□□ -0.58
BRF1-204ENST00000392557 TDRD10Q5VZ19 366 aaKnown RBP11.4□□□□□ -0.58
BRF1-204ENST00000392557 SCARA3Q6AZY7 606 aa11.4□□□□□ -0.58
BRF1-204ENST00000392557 CENPUQ71F23 418 aa11.4□□□□□ -0.58
BRF1-204ENST00000392557 OR5B17Q8NGF7 314 aa11.4□□□□□ -0.58
BRF1-204ENST00000392557 TBC1D10AQ9BXI6 508 aa11.4□□□□□ -0.58
BRF1-204ENST00000392557 ZWILCHQ9H900 591 aa11.4□□□□□ -0.58
BRF1-204ENST00000392557 SPDYE5A6NIY4 337 aa11.39□□□□□ -0.59
BRF1-204ENST00000392557 YY1P25490 414 aa11.39□□□□□ -0.59
BRF1-204ENST00000392557 ICAM3P32942 547 aa11.39□□□□□ -0.59
BRF1-204ENST00000392557 SARNPP82979 210 aaKnown RBP11.39□□□□□ -0.59
BRF1-204ENST00000392557 TFAMQ00059 246 aaKnown RBP11.39□□□□□ -0.59
BRF1-204ENST00000392557 SMTNL2Q2TAL5 461 aa11.39□□□□□ -0.59
BRF1-204ENST00000392557 SYDE1Q6ZW31 735 aaPredicted RBP11.39□□□□□ -0.59
BRF1-204ENST00000392557 CTAGE3PQ8IX95 158 aa11.39□□□□□ -0.59
BRF1-204ENST00000392557 TMC2Q8TDI7 906 aa11.39□□□□□ -0.59
BRF1-204ENST00000392557 SYNCQ9H7C4 482 aa11.39□□□□□ -0.59
BRF1-204ENST00000392557 KIAA1586Q9HCI6 787 aa11.39□□□□□ -0.59
BRF1-204ENST00000392557 PCDHB2Q9Y5E7 798 aa11.39□□□□□ -0.59
BRF1-204ENST00000392557 CFHP08603 1231 aa11.39□□□□□ -0.59
BRF1-204ENST00000392557 SLC1A1P43005 524 aa11.39□□□□□ -0.59
BRF1-204ENST00000392557 GPC3P51654 580 aa11.39□□□□□ -0.59
BRF1-204ENST00000392557 BASP1P80723 227 aaKnown RBP11.39□□□□□ -0.59
BRF1-204ENST00000392557 NFX1Q12986 1120 aaKnown RBP11.39□□□□□ -0.59
BRF1-204ENST00000392557 FAM81BQ96LP2 452 aa11.39□□□□□ -0.59
BRF1-204ENST00000392557 IMPG2Q9BZV3 1241 aa11.39□□□□□ -0.59
BRF1-204ENST00000392557 CHKBQ9Y259 395 aa11.39□□□□□ -0.59
BRF1-204ENST00000392557 GYG2O15488 501 aa11.39□□□□□ -0.59
BRF1-204ENST00000392557 CNMDO75829 334 aa11.39□□□□□ -0.59
BRF1-204ENST00000392557 PROSCO94903 275 aa11.39□□□□□ -0.59
BRF1-204ENST00000392557 KRT19P08727 400 aa11.39□□□□□ -0.59
BRF1-204ENST00000392557 SSTR1P30872 391 aa11.39□□□□□ -0.59
BRF1-204ENST00000392557 CPA2P48052 419 aa11.39□□□□□ -0.59
BRF1-204ENST00000392557 PSEN1P49768 467 aa11.39□□□□□ -0.59
BRF1-204ENST00000392557 LMNB2Q03252 620 aa11.39□□□□□ -0.59
BRF1-204ENST00000392557 RCN2Q14257 317 aa11.39□□□□□ -0.59
BRF1-204ENST00000392557 GALNTL6Q49A17 601 aa11.39□□□□□ -0.59
BRF1-204ENST00000392557 CGB2Q6NT52 195 aa11.39□□□□□ -0.59
BRF1-204ENST00000392557 NLRP9Q7RTR0 991 aa11.39□□□□□ -0.59
BRF1-204ENST00000392557 AGGF1Q8N302 714 aaeCLIP11.39□□□□□ -0.59
BRF1-204ENST00000392557 RSAD2Q8WXG1 361 aa11.39□□□□□ -0.59
BRF1-204ENST00000392557 TRIM11Q96F44 468 aa11.39□□□□□ -0.59
BRF1-204ENST00000392557 UMODL1Q5DID0 1318 aa11.39□□□□□ -0.59
BRF1-204ENST00000392557 MROH7Q68CQ1 1323 aa11.39□□□□□ -0.59
BRF1-204ENST00000392557 MCM3APO60318 1980 aa11.39□□□□□ -0.59
BRF1-204ENST00000392557 PARP14Q460N5 1801 aa11.38□□□□□ -0.59
BRF1-204ENST00000392557 CXCL11O14625 94 aa11.38□□□□□ -0.59
BRF1-204ENST00000392557 ATP5HO75947 161 aa11.38□□□□□ -0.59
BRF1-204ENST00000392557 TJP3O95049 919 aa11.38□□□□□ -0.59
BRF1-204ENST00000392557 CD19P15391 556 aa11.38□□□□□ -0.59
BRF1-204ENST00000392557 BPIFB4P59827 614 aa11.38□□□□□ -0.59
BRF1-204ENST00000392557 SLC1A5Q15758 541 aa11.38□□□□□ -0.59
BRF1-204ENST00000392557 CCNG2Q16589 344 aa11.38□□□□□ -0.59
BRF1-204ENST00000392557 MDH1BQ5I0G3 518 aa11.38□□□□□ -0.59
BRF1-204ENST00000392557 RNF43Q68DV7 783 aa11.38□□□□□ -0.59
BRF1-204ENST00000392557 ZC3H18Q86VM9 953 aaKnown RBP11.38□□□□□ -0.59
BRF1-204ENST00000392557 C12orf50Q8NA57 414 aaPredicted RBP11.38□□□□□ -0.59
BRF1-204ENST00000392557 FAXDC2Q96IV6 333 aa11.38□□□□□ -0.59
BRF1-204ENST00000392557 FBXL18Q96ME1 805 aa11.38□□□□□ -0.59
BRF1-204ENST00000392557 MCEEQ96PE7 176 aa11.38□□□□□ -0.59
BRF1-204ENST00000392557 RNF19AQ9NV58 838 aa11.38□□□□□ -0.59
BRF1-204ENST00000392557 ADRA1DP25100 572 aa11.38□□□□□ -0.59
BRF1-204ENST00000392557 ARL2P36404 184 aa11.38□□□□□ -0.59
BRF1-204ENST00000392557 CTCFP49711 727 aaPredicted RBP11.38□□□□□ -0.59
BRF1-204ENST00000392557 RPL7AP62424 266 aaKnown RBP11.38□□□□□ -0.59
BRF1-204ENST00000392557 CENPCQ03188 943 aa11.38□□□□□ -0.59
BRF1-204ENST00000392557 LAMTOR4Q0VGL1 99 aa11.38□□□□□ -0.59
BRF1-204ENST00000392557 CCDC62Q6P9F0 684 aa11.38□□□□□ -0.59
BRF1-204ENST00000392557 MFSD7Q6UXD7 560 aa11.38□□□□□ -0.59
BRF1-204ENST00000392557 ZBTB8OSQ8IWT0 167 aa11.38□□□□□ -0.59
BRF1-204ENST00000392557 FAM13CQ8NE31 585 aa11.38□□□□□ -0.59
BRF1-204ENST00000392557 MTMR12Q9C0I1 747 aa11.38□□□□□ -0.59
BRF1-204ENST00000392557 RNPEPL1Q9HAU8 725 aa11.38□□□□□ -0.59
BRF1-204ENST00000392557 SLC5A4Q9NY91 659 aa11.38□□□□□ -0.59
BRF1-204ENST00000392557 ADCY3O60266 1144 aa11.38□□□□□ -0.59
BRF1-204ENST00000392557 SLC25A27O95847 323 aa11.38□□□□□ -0.59
BRF1-204ENST00000392557 OAS1P00973 400 aaKnown RBP11.38□□□□□ -0.59
BRF1-204ENST00000392557 PRKCBP05771 671 aa11.38□□□□□ -0.59
BRF1-204ENST00000392557 CALB2P22676 271 aa11.38□□□□□ -0.59
BRF1-204ENST00000392557 EFTUD2Q15029 972 aaKnown RBP eCLIP11.38□□□□□ -0.598e-7■■■■■ 50.8
BRF1-204ENST00000392557 MAPK6Q16659 721 aa11.38□□□□□ -0.59
BRF1-204ENST00000392557 KCNT1Q5JUK3 1230 aa11.38□□□□□ -0.59
BRF1-204ENST00000392557 SLFN12LQ6IEE8 588 aa11.38□□□□□ -0.59
BRF1-204ENST00000392557 DNAJC24Q6P3W2 148 aa11.38□□□□□ -0.59
BRF1-204ENST00000392557 C3orf62Q6ZUJ4 267 aa11.38□□□□□ -0.59
BRF1-204ENST00000392557 TRABD2AQ86V40 505 aa11.38□□□□□ -0.59
BRF1-204ENST00000392557 PDCD7Q8N8D1 485 aaKnown RBP11.38□□□□□ -0.59
BRF1-204ENST00000392557 CEP120Q8N960 986 aa11.38□□□□□ -0.59
BRF1-204ENST00000392557 MAML1Q92585 1016 aa11.38□□□□□ -0.59
BRF1-204ENST00000392557 DDX27Q96GQ7 796 aaKnown RBP11.38□□□□□ -0.59
BRF1-204ENST00000392557 B4GALT5O43286 388 aa11.37□□□□□ -0.59
BRF1-204ENST00000392557 ATG7O95352 703 aa11.37□□□□□ -0.59
BRF1-204ENST00000392557 IVDP26440 423 aa11.37□□□□□ -0.59
BRF1-204ENST00000392557 RTP1P59025 263 aa11.37□□□□□ -0.59
BRF1-204ENST00000392557 YWHAGP61981 247 aaKnown RBP eCLIP11.37□□□□□ -0.594e-6■■■■□ 21.9
BRF1-204ENST00000392557 ORC1Q13415 861 aa11.37□□□□□ -0.59
BRF1-204ENST00000392557 NCOA4Q13772 614 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms