RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 PPP3CAQ08209 521 aa13.52□□□□□ -0.25
GGPS1-203ENST00000391855 TEAD2Q15562 447 aa13.52□□□□□ -0.25
GGPS1-203ENST00000391855 UNC93AQ86WB7 457 aa13.52□□□□□ -0.25
GGPS1-203ENST00000391855 TTC39CQ8N584 583 aa13.52□□□□□ -0.25
GGPS1-203ENST00000391855 DEPDC1BQ8WUY9 529 aa13.52□□□□□ -0.25
GGPS1-203ENST00000391855 TRMT2BQ96GJ1 504 aaKnown RBP13.52□□□□□ -0.25
GGPS1-203ENST00000391855 GBP4Q96PP9 640 aa13.52□□□□□ -0.25
GGPS1-203ENST00000391855 PRRX2Q99811 253 aa13.52□□□□□ -0.25
GGPS1-203ENST00000391855 ELOVL4Q9GZR5 314 aa13.52□□□□□ -0.25
GGPS1-203ENST00000391855 ATXN3LQ9H3M9 355 aa13.52□□□□□ -0.25
GGPS1-203ENST00000391855 MFSD1Q9H3U5 465 aa13.52□□□□□ -0.25
GGPS1-203ENST00000391855 SLITRK6Q9H5Y7 841 aa13.52□□□□□ -0.25
GGPS1-203ENST00000391855 FAM124BQ9H5Z6 455 aaPredicted RBP13.52□□□□□ -0.25
GGPS1-203ENST00000391855 SMYD3Q9H7B4 428 aa13.52□□□□□ -0.25
GGPS1-203ENST00000391855 CYP3A43Q9HB55 503 aa13.52□□□□□ -0.25
GGPS1-203ENST00000391855 ZFP14Q9HCL3 533 aa13.52□□□□□ -0.25
GGPS1-203ENST00000391855 ZNF334Q9HCZ1 680 aaPredicted RBP13.52□□□□□ -0.25
GGPS1-203ENST00000391855 CRTAC1Q9NQ79 661 aa13.52□□□□□ -0.25
GGPS1-203ENST00000391855 KIAA1468Q9P260 1216 aa13.52□□□□□ -0.25
GGPS1-203ENST00000391855 ARMCX3Q9UH62 379 aaPredicted RBP13.52□□□□□ -0.25
GGPS1-203ENST00000391855 TRIM49BA6NDI0 452 aa13.51□□□□□ -0.25
GGPS1-203ENST00000391855 HCRTO43612 131 aa13.51□□□□□ -0.25
GGPS1-203ENST00000391855 NARSO43776 548 aaKnown RBP13.51□□□□□ -0.25
GGPS1-203ENST00000391855 NOL4O94818 638 aa13.51□□□□□ -0.25
GGPS1-203ENST00000391855 PDGFRBP09619 1106 aa13.51□□□□□ -0.25
GGPS1-203ENST00000391855 PTPN1P18031 435 aaKnown RBP13.51□□□□□ -0.25
GGPS1-203ENST00000391855 CYP2F1P24903 491 aa13.51□□□□□ -0.25
GGPS1-203ENST00000391855 ANXA13P27216 316 aa13.51□□□□□ -0.25
GGPS1-203ENST00000391855 WEE1P30291 646 aa13.51□□□□□ -0.25
GGPS1-203ENST00000391855 NUBP1P53384 320 aa13.51□□□□□ -0.25
GGPS1-203ENST00000391855 PMS1P54277 932 aaKnown RBP13.51□□□□□ -0.25
GGPS1-203ENST00000391855 NOP14P78316 857 aaKnown RBP13.51□□□□□ -0.25
GGPS1-203ENST00000391855 CYP27A1Q02318 531 aa13.51□□□□□ -0.25
GGPS1-203ENST00000391855 MDH1BQ5I0G3 518 aa13.51□□□□□ -0.25
GGPS1-203ENST00000391855 FAM78AQ5JUQ0 283 aa13.51□□□□□ -0.25
GGPS1-203ENST00000391855 TCERG1LQ5VWI1 586 aa13.51□□□□□ -0.25
GGPS1-203ENST00000391855 GAREM2Q75VX8 874 aa13.51□□□□□ -0.25
GGPS1-203ENST00000391855 B3GALNT2Q8NCR0 500 aa13.51□□□□□ -0.25
GGPS1-203ENST00000391855 ZSCAN18Q8TBC5 510 aaPredicted RBP13.51□□□□□ -0.25
GGPS1-203ENST00000391855 TAS1R2Q8TE23 839 aa13.51□□□□□ -0.25
GGPS1-203ENST00000391855 GIPC2Q8TF65 315 aa13.51□□□□□ -0.25
GGPS1-203ENST00000391855 PCED1BQ96HM7 432 aa13.51□□□□□ -0.25
GGPS1-203ENST00000391855 SPATA17Q96L03 361 aa13.51□□□□□ -0.25
GGPS1-203ENST00000391855 MYRFLQ96LU7 910 aa13.51□□□□□ -0.25
GGPS1-203ENST00000391855 KXD1Q9BQD3 176 aa13.51□□□□□ -0.25
GGPS1-203ENST00000391855 NIF3L1Q9GZT8 377 aa13.51□□□□□ -0.25
GGPS1-203ENST00000391855 SMOC2Q9H3U7 446 aa13.51□□□□□ -0.25
GGPS1-203ENST00000391855 IL21Q9HBE4 155 aa13.51□□□□□ -0.25
GGPS1-203ENST00000391855 PPP1R3GB7ZBB8 358 aa13.5□□□□□ -0.25
GGPS1-203ENST00000391855 ATP2C2O75185 946 aa13.5□□□□□ -0.25
GGPS1-203ENST00000391855 GNA14O95837 355 aa13.5□□□□□ -0.25
GGPS1-203ENST00000391855 CFHP08603 1231 aa13.5□□□□□ -0.25
GGPS1-203ENST00000391855 HMGA1P17096 107 aaKnown RBP13.5□□□□□ -0.25
GGPS1-203ENST00000391855 FCARP24071 287 aa13.5□□□□□ -0.25
GGPS1-203ENST00000391855 ASPAP45381 313 aa13.5□□□□□ -0.25
GGPS1-203ENST00000391855 PAK1Q13153 545 aa13.5□□□□□ -0.25
GGPS1-203ENST00000391855 DCAF17Q5H9S7 520 aaPredicted RBP13.5□□□□□ -0.25
GGPS1-203ENST00000391855 ISM2Q6H9L7 571 aa13.5□□□□□ -0.25
GGPS1-203ENST00000391855 KLHL10Q6JEL2 608 aa13.5□□□□□ -0.25
GGPS1-203ENST00000391855 TTI2Q6NXR4 508 aa13.5□□□□□ -0.25
GGPS1-203ENST00000391855 SCARA5Q6ZMJ2 495 aa13.5□□□□□ -0.25
GGPS1-203ENST00000391855 FRMD5Q7Z6J6 570 aa13.5□□□□□ -0.25
GGPS1-203ENST00000391855 FILIP1Q7Z7B0 1213 aa13.5□□□□□ -0.25
GGPS1-203ENST00000391855 SCN4BQ8IWT1 228 aa13.5□□□□□ -0.25
GGPS1-203ENST00000391855 FBXL13Q8NEE6 735 aa13.5□□□□□ -0.25
GGPS1-203ENST00000391855 NELFBQ8WX92 580 aa13.5□□□□□ -0.25
GGPS1-203ENST00000391855 DNASE1L2Q92874 299 aa13.5□□□□□ -0.25
GGPS1-203ENST00000391855 SHDQ96IW2 340 aa13.5□□□□□ -0.25
GGPS1-203ENST00000391855 BCO2Q9BYV7 579 aa13.5□□□□□ -0.25
GGPS1-203ENST00000391855 TASP1Q9H6P5 420 aa13.5□□□□□ -0.25
GGPS1-203ENST00000391855 MMRN2Q9H8L6 949 aa13.5□□□□□ -0.25
GGPS1-203ENST00000391855 ARHGEF3Q9NR81 526 aa13.5□□□□□ -0.25
GGPS1-203ENST00000391855 OBP2AQ9NY56 170 aa13.5□□□□□ -0.25
GGPS1-203ENST00000391855 SLC38A8A6NNN8 435 aa13.49□□□□□ -0.25
GGPS1-203ENST00000391855 GOLGA6L22H0YM25 854 aa13.49□□□□□ -0.25
GGPS1-203ENST00000391855 BIN1O00499 593 aa13.49□□□□□ -0.25
GGPS1-203ENST00000391855 FGFR1OPO95684 399 aaKnown RBP13.49□□□□□ -0.25
GGPS1-203ENST00000391855 GJA1P17302 382 aa13.49□□□□□ -0.25
GGPS1-203ENST00000391855 BMP6P22004 513 aa13.49□□□□□ -0.25
GGPS1-203ENST00000391855 BDNFP23560 247 aa13.49□□□□□ -0.25
GGPS1-203ENST00000391855 GRIK1P39086 918 aa13.49□□□□□ -0.25
GGPS1-203ENST00000391855 CLCN5P51795 746 aa13.49□□□□□ -0.25
GGPS1-203ENST00000391855 CDH8P55286 799 aa13.49□□□□□ -0.25
GGPS1-203ENST00000391855 NLRP12P59046 1061 aa13.49□□□□□ -0.25
GGPS1-203ENST00000391855 PRKCQQ04759 706 aa13.49□□□□□ -0.25
GGPS1-203ENST00000391855 INCA1Q0VD86 236 aa13.49□□□□□ -0.25
GGPS1-203ENST00000391855 DDR2Q16832 855 aa13.49□□□□□ -0.25
GGPS1-203ENST00000391855 CCDC142Q17RM4 750 aa13.49□□□□□ -0.25
GGPS1-203ENST00000391855 CCDC40Q4G0X9 1142 aa13.49□□□□□ -0.25
GGPS1-203ENST00000391855 WDR44Q5JSH3 913 aa13.49□□□□□ -0.25
GGPS1-203ENST00000391855 GPR158Q5T848 1215 aa13.49□□□□□ -0.25
GGPS1-203ENST00000391855 TANGO2Q6ICL3 276 aa13.49□□□□□ -0.25
GGPS1-203ENST00000391855 DENND5BQ6ZUT9 1274 aa13.49□□□□□ -0.25
GGPS1-203ENST00000391855 SIX5Q8N196 739 aa13.49□□□□□ -0.25
GGPS1-203ENST00000391855 GPR152Q8TDT2 470 aa13.49□□□□□ -0.25
GGPS1-203ENST00000391855 MRPS31Q92665 395 aaKnown RBP13.49□□□□□ -0.25
GGPS1-203ENST00000391855 EEF2KMTQ96G04 330 aa13.49□□□□□ -0.25
GGPS1-203ENST00000391855 C8orf48Q96LL4 319 aa13.49□□□□□ -0.25
GGPS1-203ENST00000391855 IPO9Q96P70 1041 aaKnown RBP13.49□□□□□ -0.25
GGPS1-203ENST00000391855 RPP25Q9BUL9 199 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms