RNA–Protein interactions for RNA: ENST00000390996.1

RNU6-1009P-201, Transcript of RNA, U6 small nuclear 1009, pseudogene, humanhuman

BASIC

Gene RNU6-1009P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1009P-201ENST00000390996 SLC5A4Q9NY91 659 aa3.97□□□□□ -1.77
RNU6-1009P-201ENST00000390996 CCDC187A0A096LP49 1063 aa3.96□□□□□ -1.78
RNU6-1009P-201ENST00000390996 ERC2O15083 957 aa3.96□□□□□ -1.78
RNU6-1009P-201ENST00000390996 SMARCA1P28370 1054 aa3.96□□□□□ -1.78
RNU6-1009P-201ENST00000390996 PLCD1P51178 756 aa3.96□□□□□ -1.78
RNU6-1009P-201ENST00000390996 LRRC41Q15345 812 aa3.96□□□□□ -1.78
RNU6-1009P-201ENST00000390996 FAM160B1Q5W0V3 765 aa3.96□□□□□ -1.78
RNU6-1009P-201ENST00000390996 SFRP4Q6FHJ7 346 aaPredicted RBP3.96□□□□□ -1.78
RNU6-1009P-201ENST00000390996 KIRREL2Q6UWL6 708 aa3.96□□□□□ -1.78
RNU6-1009P-201ENST00000390996 PARS2Q7L3T8 475 aaKnown RBP3.96□□□□□ -1.78
RNU6-1009P-201ENST00000390996 IRF2BP2Q7Z5L9 587 aa3.96□□□□□ -1.78
RNU6-1009P-201ENST00000390996 NECAB2Q7Z6G3 386 aa3.96□□□□□ -1.78
RNU6-1009P-201ENST00000390996 NANOGP1Q8N7R0 232 aa3.96□□□□□ -1.78
RNU6-1009P-201ENST00000390996 ADAMTS15Q8TE58 950 aa3.96□□□□□ -1.78
RNU6-1009P-201ENST00000390996 ATG4AQ8WYN0 398 aa3.96□□□□□ -1.78
RNU6-1009P-201ENST00000390996 VCPIP1Q96JH7 1222 aa3.96□□□□□ -1.78
RNU6-1009P-201ENST00000390996 TRNAU1APQ9NX07 287 aaKnown RBP3.96□□□□□ -1.78
RNU6-1009P-201ENST00000390996 KLHL13Q9P2N7 655 aa3.96□□□□□ -1.78
RNU6-1009P-201ENST00000390996 SERTAD3Q9UJW9 196 aa3.96□□□□□ -1.78
RNU6-1009P-201ENST00000390996 ZDHHC8Q9ULC8 765 aa3.96□□□□□ -1.78
RNU6-1009P-201ENST00000390996 LY6G6EA0A0G2JKS1 128 aa3.95□□□□□ -1.78
RNU6-1009P-201ENST00000390996 M0QYG6 137 aa3.95□□□□□ -1.78
RNU6-1009P-201ENST00000390996 FCHO1O14526 889 aa3.95□□□□□ -1.78
RNU6-1009P-201ENST00000390996 XPOTO43592 962 aaKnown RBP3.95□□□□□ -1.78
RNU6-1009P-201ENST00000390996 FESP07332 822 aa3.95□□□□□ -1.78
RNU6-1009P-201ENST00000390996 NPSP0C0P6 89 aa3.95□□□□□ -1.78
RNU6-1009P-201ENST00000390996 PIM1P11309 404 aaPredicted RBP3.95□□□□□ -1.78
RNU6-1009P-201ENST00000390996 ATP5F1P24539 256 aaPredicted RBP3.95□□□□□ -1.78
RNU6-1009P-201ENST00000390996 PPIFP30405 207 aaKnown RBP3.95□□□□□ -1.78
RNU6-1009P-201ENST00000390996 HTRA4P83105 476 aaPredicted RBP3.95□□□□□ -1.78
RNU6-1009P-201ENST00000390996 MIDNQ504T8 468 aa3.95□□□□□ -1.78
RNU6-1009P-201ENST00000390996 SDE2Q6IQ49 451 aa3.95□□□□□ -1.78
RNU6-1009P-201ENST00000390996 MIS18BP1Q6P0N0 1132 aa3.95□□□□□ -1.78
RNU6-1009P-201ENST00000390996 Q6ZWC4 215 aa3.95□□□□□ -1.78
RNU6-1009P-201ENST00000390996 C3orf20Q8ND61 904 aa3.95□□□□□ -1.78
RNU6-1009P-201ENST00000390996 PRSS3P2Q8NHM4 247 aa3.95□□□□□ -1.78
RNU6-1009P-201ENST00000390996 C16orf52Q8NHV5 167 aa3.95□□□□□ -1.78
RNU6-1009P-201ENST00000390996 DDX17Q92841 729 aaKnown RBP3.95□□□□□ -1.78
RNU6-1009P-201ENST00000390996 SLC46A1Q96NT5 459 aa3.95□□□□□ -1.78
RNU6-1009P-201ENST00000390996 MRPL46Q9H2W6 279 aaKnown RBP3.95□□□□□ -1.78
RNU6-1009P-201ENST00000390996 HESX1Q9UBX0 185 aa3.95□□□□□ -1.78
RNU6-1009P-201ENST00000390996 SCAF8Q9UPN6 1271 aaKnown RBP3.95□□□□□ -1.78
RNU6-1009P-201ENST00000390996 PCDHA3Q9Y5H8 950 aa3.95□□□□□ -1.78
RNU6-1009P-201ENST00000390996 MYMKA6NI61 221 aa3.94□□□□□ -1.78
RNU6-1009P-201ENST00000390996 PRR23D1E9PI22 279 aaPredicted RBP3.94□□□□□ -1.78
RNU6-1009P-201ENST00000390996 POC1B-GALNT4F8VUJ3 575 aa3.94□□□□□ -1.78
RNU6-1009P-201ENST00000390996 FGBP02675 491 aa3.94□□□□□ -1.78
RNU6-1009P-201ENST00000390996 PRR23D2P0DMB1 279 aaPredicted RBP3.94□□□□□ -1.78
RNU6-1009P-201ENST00000390996 CYP2A6P11509 494 aaPredicted RBP3.94□□□□□ -1.78
RNU6-1009P-201ENST00000390996 ADKP55263 362 aaKnown RBP3.94□□□□□ -1.78
RNU6-1009P-201ENST00000390996 GTF2H3Q13889 308 aa3.94□□□□□ -1.78
RNU6-1009P-201ENST00000390996 PCBP2Q15366 365 aaKnown RBP eCLIP3.94□□□□□ -1.78
RNU6-1009P-201ENST00000390996 TWIST1Q15672 202 aa3.94□□□□□ -1.78
RNU6-1009P-201ENST00000390996 ABCB5Q2M3G0 1257 aa3.94□□□□□ -1.78
RNU6-1009P-201ENST00000390996 UAP1L1Q3KQV9 507 aa3.94□□□□□ -1.78
RNU6-1009P-201ENST00000390996 SYDE2Q5VT97 1194 aa3.94□□□□□ -1.78
RNU6-1009P-201ENST00000390996 MEPCEQ7L2J0 689 aaKnown RBP3.94□□□□□ -1.78
RNU6-1009P-201ENST00000390996 MRPL10Q7Z7H8 261 aaKnown RBP3.94□□□□□ -1.78
RNU6-1009P-201ENST00000390996 GALNT4Q8N4A0 578 aa3.94□□□□□ -1.78
RNU6-1009P-201ENST00000390996 LRRC71Q8N4P6 559 aa3.94□□□□□ -1.78
RNU6-1009P-201ENST00000390996 FAM46DQ8NEK8 389 aa3.94□□□□□ -1.78
RNU6-1009P-201ENST00000390996 GLG1Q92896 1179 aa3.94□□□□□ -1.78
RNU6-1009P-201ENST00000390996 DAZAP1Q96EP5 407 aaKnown RBP3.94□□□□□ -1.78
RNU6-1009P-201ENST00000390996 PTDSS2Q9BVG9 487 aa3.94□□□□□ -1.78
RNU6-1009P-201ENST00000390996 WDCPQ9H6R7 721 aa3.94□□□□□ -1.78
RNU6-1009P-201ENST00000390996 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.94□□□□□ -1.78
RNU6-1009P-201ENST00000390996 GABRQQ9UN88 632 aa3.94□□□□□ -1.78
RNU6-1009P-201ENST00000390996 POLHQ9Y253 713 aa3.94□□□□□ -1.78
RNU6-1009P-201ENST00000390996 IGKV2D-30A0A075B6S6 120 aa3.93□□□□□ -1.78
RNU6-1009P-201ENST00000390996 A1L4Q6 167 aa3.93□□□□□ -1.78
RNU6-1009P-201ENST00000390996 ARIH2O95376 493 aa3.93□□□□□ -1.78
RNU6-1009P-201ENST00000390996 GNAI2P04899 355 aa3.93□□□□□ -1.78
RNU6-1009P-201ENST00000390996 CHRM5P08912 532 aaPredicted RBP3.93□□□□□ -1.78
RNU6-1009P-201ENST00000390996 HK3P52790 923 aa3.93□□□□□ -1.78
RNU6-1009P-201ENST00000390996 PDE1AP54750 535 aa3.93□□□□□ -1.78
RNU6-1009P-201ENST00000390996 LOXL3P58215 753 aa3.93□□□□□ -1.78
RNU6-1009P-201ENST00000390996 NOGQ13253 232 aa3.93□□□□□ -1.78
RNU6-1009P-201ENST00000390996 LONRF3Q496Y0 759 aa3.93□□□□□ -1.78
RNU6-1009P-201ENST00000390996 MEX3CQ5U5Q3 659 aaKnown RBP3.93□□□□□ -1.78
RNU6-1009P-201ENST00000390996 GIMAP6Q6P9H5 292 aa3.93□□□□□ -1.78
RNU6-1009P-201ENST00000390996 PPP1R3BQ86XI6 285 aa3.93□□□□□ -1.78
RNU6-1009P-201ENST00000390996 DDX42Q86XP3 938 aaKnown RBP eCLIP3.93□□□□□ -1.78
RNU6-1009P-201ENST00000390996 TNPO1Q92973 898 aaKnown RBP3.93□□□□□ -1.78
RNU6-1009P-201ENST00000390996 R3HDM4Q96D70 268 aa3.93□□□□□ -1.78
RNU6-1009P-201ENST00000390996 MARK4Q96L34 752 aa3.93□□□□□ -1.78
RNU6-1009P-201ENST00000390996 SNX18Q96RF0 628 aa3.93□□□□□ -1.78
RNU6-1009P-201ENST00000390996 TCRBV5S1A1TA0A578 114 aa3.92□□□□□ -1.78
RNU6-1009P-201ENST00000390996 FAM90A10PA6NDY2 464 aa3.92□□□□□ -1.78
RNU6-1009P-201ENST00000390996 USP1O94782 785 aa3.92□□□□□ -1.78
RNU6-1009P-201ENST00000390996 PDE8BO95263 885 aa3.92□□□□□ -1.78
RNU6-1009P-201ENST00000390996 AHSGP02765 367 aa3.92□□□□□ -1.78
RNU6-1009P-201ENST00000390996 ATXN1LP0C7T5 689 aaKnown RBP3.92□□□□□ -1.78
RNU6-1009P-201ENST00000390996 MYBL2P10244 700 aa3.92□□□□□ -1.78
RNU6-1009P-201ENST00000390996 IL1R2P27930 398 aa3.92□□□□□ -1.78
RNU6-1009P-201ENST00000390996 TRIM71Q2Q1W2 868 aaKnown RBP3.92□□□□□ -1.78
RNU6-1009P-201ENST00000390996 ARHGAP40Q5TG30 622 aa3.92□□□□□ -1.78
RNU6-1009P-201ENST00000390996 SHC4Q6S5L8 630 aa3.92□□□□□ -1.78
RNU6-1009P-201ENST00000390996 HEATR3Q7Z4Q2 680 aa3.92□□□□□ -1.78
RNU6-1009P-201ENST00000390996 TERB1Q8NA31 727 aa3.92□□□□□ -1.78
RNU6-1009P-201ENST00000390996 NSMCE1Q8WV22 266 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms