RNA–Protein interactions for RNA: ENST00000390846.1

SNORA40.19-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.19-201ENST00000390846 ATXN7L2Q5T6C5 722 aaPredicted RBP2.56□□□□□ -2
SNORA40.19-201ENST00000390846 INTS11Q5TA45 600 aaKnown RBP2.56□□□□□ -2
SNORA40.19-201ENST00000390846 RNF220Q5VTB9 566 aa2.56□□□□□ -2
SNORA40.19-201ENST00000390846 KLHDC7AQ5VTJ3 777 aa2.56□□□□□ -2
SNORA40.19-201ENST00000390846 TSHZ3Q63HK5 1081 aa2.56□□□□□ -2
SNORA40.19-201ENST00000390846 AFMIDQ63HM1 303 aa2.56□□□□□ -2
SNORA40.19-201ENST00000390846 OTUD7BQ6GQQ9 843 aa2.56□□□□□ -2
SNORA40.19-201ENST00000390846 HIBCHQ6NVY1 386 aaPredicted RBP2.56□□□□□ -2
SNORA40.19-201ENST00000390846 ZNF788Q6ZQV5 615 aa2.56□□□□□ -2
SNORA40.19-201ENST00000390846 USP45Q70EL2 814 aa2.56□□□□□ -2
SNORA40.19-201ENST00000390846 MED25Q71SY5 747 aa2.56□□□□□ -2
SNORA40.19-201ENST00000390846 PDZD4Q76G19 769 aaPredicted RBP2.56□□□□□ -2
SNORA40.19-201ENST00000390846 KRT77Q7Z794 578 aa2.56□□□□□ -2
SNORA40.19-201ENST00000390846 GALNT5Q7Z7M9 940 aa2.56□□□□□ -2
SNORA40.19-201ENST00000390846 GLB1L2Q8IW92 636 aa2.56□□□□□ -2
SNORA40.19-201ENST00000390846 OR8H2Q8N162 312 aa2.56□□□□□ -2
SNORA40.19-201ENST00000390846 ZGPATQ8N5A5 531 aaKnown RBP2.56□□□□□ -2
SNORA40.19-201ENST00000390846 CELF5Q8N6W0 485 aaKnown RBP2.56□□□□□ -2
SNORA40.19-201ENST00000390846 OR7D4Q8NG98 312 aa2.56□□□□□ -2
SNORA40.19-201ENST00000390846 ADAMTS18Q8TE60 1221 aa2.56□□□□□ -2
SNORA40.19-201ENST00000390846 ZNF384Q8TF68 577 aa2.56□□□□□ -2
SNORA40.19-201ENST00000390846 PHKBQ93100 1093 aa2.56□□□□□ -2
SNORA40.19-201ENST00000390846 CAVIN3Q969G5 261 aa2.56□□□□□ -2
SNORA40.19-201ENST00000390846 FERMT2Q96AC1 680 aa2.56□□□□□ -2
SNORA40.19-201ENST00000390846 TBATAQ96M53 351 aa2.56□□□□□ -2
SNORA40.19-201ENST00000390846 CGRRF1Q99675 332 aa2.56□□□□□ -2
SNORA40.19-201ENST00000390846 TIMP4Q99727 224 aa2.56□□□□□ -2
SNORA40.19-201ENST00000390846 SORBS1Q9BX66 1292 aaKnown RBP2.56□□□□□ -2
SNORA40.19-201ENST00000390846 ALOXE3Q9BYJ1 711 aa2.56□□□□□ -2
SNORA40.19-201ENST00000390846 C22orf23Q9BZE7 217 aa2.56□□□□□ -2
SNORA40.19-201ENST00000390846 QRSL1Q9H0R6 528 aaKnown RBP2.56□□□□□ -2
SNORA40.19-201ENST00000390846 IFT122Q9HBG6 1241 aa2.56□□□□□ -2
SNORA40.19-201ENST00000390846 RIC8AQ9NPQ8 531 aa2.56□□□□□ -2
SNORA40.19-201ENST00000390846 IL17RBQ9NRM6 502 aa2.56□□□□□ -2
SNORA40.19-201ENST00000390846 SMC4Q9NTJ3 1288 aa2.56□□□□□ -2
SNORA40.19-201ENST00000390846 RNF7Q9UBF6 113 aa2.56□□□□□ -2
SNORA40.19-201ENST00000390846 CORO2BQ9UQ03 480 aa2.56□□□□□ -2
SNORA40.19-201ENST00000390846 CLCA2Q9UQC9 943 aa2.56□□□□□ -2
SNORA40.19-201ENST00000390846 HDAC5Q9UQL6 1122 aa2.56□□□□□ -2
SNORA40.19-201ENST00000390846 ZKSCAN5Q9Y2L8 839 aa2.56□□□□□ -2
SNORA40.19-201ENST00000390846 GPR45Q9Y5Y3 372 aa2.56□□□□□ -2
SNORA40.19-201ENST00000390846 WASHC2AQ641Q2 1341 aa2.56□□□□□ -2
SNORA40.19-201ENST00000390846 RPTORQ8N122 1335 aa2.56□□□□□ -2
SNORA40.19-201ENST00000390846 WDR27A2RRH5 827 aa2.55□□□□□ -2
SNORA40.19-201ENST00000390846 LRRC14BA6NHZ5 514 aa2.55□□□□□ -2
SNORA40.19-201ENST00000390846 RRN3P2A6NIE6 340 aa2.55□□□□□ -2
SNORA40.19-201ENST00000390846 EIF3FO00303 357 aaPredicted RBP2.55□□□□□ -2
SNORA40.19-201ENST00000390846 ORC4O43929 436 aa2.55□□□□□ -2
SNORA40.19-201ENST00000390846 NRP2O60462 931 aa2.55□□□□□ -2
SNORA40.19-201ENST00000390846 PRAMEF4O60810 478 aa2.55□□□□□ -2
SNORA40.19-201ENST00000390846 MBD4O95243 580 aa2.55□□□□□ -2
SNORA40.19-201ENST00000390846 TSHRP16473 764 aa2.55□□□□□ -2
SNORA40.19-201ENST00000390846 PTMSP20962 102 aa2.55□□□□□ -2
SNORA40.19-201ENST00000390846 CNTFP26441 200 aa2.55□□□□□ -2
SNORA40.19-201ENST00000390846 HTR1BP28222 390 aa2.55□□□□□ -2
SNORA40.19-201ENST00000390846 ALDH1A3P47895 512 aa2.55□□□□□ -2
SNORA40.19-201ENST00000390846 VAV2P52735 878 aa2.55□□□□□ -2
SNORA40.19-201ENST00000390846 NR1H2P55055 460 aa2.55□□□□□ -2
SNORA40.19-201ENST00000390846 NOMO3P69849 1222 aa2.55□□□□□ -2
SNORA40.19-201ENST00000390846 FAM193AP78312 1265 aa2.55□□□□□ -2
SNORA40.19-201ENST00000390846 TNFAIP2Q03169 654 aa2.55□□□□□ -2
SNORA40.19-201ENST00000390846 PPFIA1Q13136 1202 aa2.55□□□□□ -2
SNORA40.19-201ENST00000390846 TBX2Q13207 712 aaPredicted RBP2.55□□□□□ -2
SNORA40.19-201ENST00000390846 SP140Q13342 867 aa2.55□□□□□ -2
SNORA40.19-201ENST00000390846 PMS2P11Q13670 270 aa2.55□□□□□ -2
SNORA40.19-201ENST00000390846 UBXN2BQ14CS0 331 aa2.55□□□□□ -2
SNORA40.19-201ENST00000390846 SART3Q15020 963 aaKnown RBP2.55□□□□□ -2
SNORA40.19-201ENST00000390846 NOMO1Q15155 1222 aa2.55□□□□□ -2
SNORA40.19-201ENST00000390846 FSCN1Q16658 493 aaKnown RBP2.55□□□□□ -2
SNORA40.19-201ENST00000390846 ANO4Q32M45 955 aa2.55□□□□□ -2
SNORA40.19-201ENST00000390846 CCDC38Q502W7 563 aa2.55□□□□□ -2
SNORA40.19-201ENST00000390846 NOMO2Q5JPE7 1267 aa2.55□□□□□ -2
SNORA40.19-201ENST00000390846 SPECC1Q5M775 1068 aa2.55□□□□□ -2
SNORA40.19-201ENST00000390846 WDR45BQ5MNZ6 344 aa2.55□□□□□ -2
SNORA40.19-201ENST00000390846 VPS53Q5VIR6 699 aa2.55□□□□□ -2
SNORA40.19-201ENST00000390846 IZUMO3Q5VZ72 239 aa2.55□□□□□ -2
SNORA40.19-201ENST00000390846 SP5Q6BEB4 398 aaPredicted RBP2.55□□□□□ -2
SNORA40.19-201ENST00000390846 RSRC2Q7L4I2 434 aaKnown RBP2.55□□□□□ -2
SNORA40.19-201ENST00000390846 HEATR4Q86WZ0 1026 aa2.55□□□□□ -2
SNORA40.19-201ENST00000390846 DENND1CQ8IV53 801 aa2.55□□□□□ -2
SNORA40.19-201ENST00000390846 LIX1LQ8IVB5 337 aa2.55□□□□□ -2
SNORA40.19-201ENST00000390846 CPOQ8IVL8 374 aa2.55□□□□□ -2
SNORA40.19-201ENST00000390846 CACNA2D3Q8IZS8 1091 aa2.55□□□□□ -2
SNORA40.19-201ENST00000390846 DCBLD1Q8N8Z6 715 aa2.55□□□□□ -2
SNORA40.19-201ENST00000390846 SPATA5Q8NB90 893 aa2.55□□□□□ -2
SNORA40.19-201ENST00000390846 GPR156Q8NFN8 814 aa2.55□□□□□ -2
SNORA40.19-201ENST00000390846 ZNF480Q8WV37 535 aa2.55□□□□□ -2
SNORA40.19-201ENST00000390846 STON2Q8WXE9 905 aa2.55□□□□□ -2
SNORA40.19-201ENST00000390846 CCT6BQ92526 530 aa2.55□□□□□ -2
SNORA40.19-201ENST00000390846 SLC9A6Q92581 669 aa2.55□□□□□ -2
SNORA40.19-201ENST00000390846 HVCN1Q96D96 273 aa2.55□□□□□ -2
SNORA40.19-201ENST00000390846 C1GALT1C1Q96EU7 318 aa2.55□□□□□ -2
SNORA40.19-201ENST00000390846 DMRTA2Q96SC8 542 aa2.55□□□□□ -2
SNORA40.19-201ENST00000390846 MRI1Q9BV20 369 aa2.55□□□□□ -2
SNORA40.19-201ENST00000390846 TTLL2Q9BWV7 592 aa2.55□□□□□ -2
SNORA40.19-201ENST00000390846 PCGF6Q9BYE7 350 aa2.55□□□□□ -2
SNORA40.19-201ENST00000390846 MYLK2Q9H1R3 596 aa2.55□□□□□ -2
SNORA40.19-201ENST00000390846 RSPH9Q9H1X1 276 aaPredicted RBP2.55□□□□□ -2
SNORA40.19-201ENST00000390846 MAGEH1Q9H213 219 aa2.55□□□□□ -2
SNORA40.19-201ENST00000390846 EPC1Q9H2F5 836 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms