RNA–Protein interactions for RNA: ENST00000390654.7

COL23A1-201, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS P2 TSL 5 BASIC

Gene COL23A1, Length 3,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-201ENST00000390654 AGGF1Q8N302 714 aaeCLIP22.03■■□□□ 1.123e-6■■■■■ 27.3
COL23A1-201ENST00000390654 STK32AQ8WU08 396 aa22.03■■□□□ 1.12
COL23A1-201ENST00000390654 ARL8BQ9NVJ2 186 aa22.03■■□□□ 1.12
COL23A1-201ENST00000390654 CYP39A1Q9NYL5 469 aa22.03■■□□□ 1.12
COL23A1-201ENST00000390654 KANSL3Q9P2N6 904 aa22.03■■□□□ 1.12
COL23A1-201ENST00000390654 MAGEB2O15479 319 aa22.03■■□□□ 1.12
COL23A1-201ENST00000390654 FAM155BO75949 473 aa22.03■■□□□ 1.12
COL23A1-201ENST00000390654 ATP4AP20648 1035 aa22.03■■□□□ 1.12
COL23A1-201ENST00000390654 MARK3P27448 753 aa22.03■■□□□ 1.12
COL23A1-201ENST00000390654 PTDSS1P48651 473 aaKnown RBP22.03■■□□□ 1.12
COL23A1-201ENST00000390654 CLNKQ7Z7G1 428 aa22.03■■□□□ 1.12
COL23A1-201ENST00000390654 IGDCC3Q8IVU1 814 aa22.03■■□□□ 1.12
COL23A1-201ENST00000390654 WDTC1Q8N5D0 677 aa22.03■■□□□ 1.12
COL23A1-201ENST00000390654 FAM111AQ96PZ2 611 aa22.03■■□□□ 1.12
COL23A1-201ENST00000390654 CALN1Q9BXU9 219 aa22.03■■□□□ 1.12
COL23A1-201ENST00000390654 PDLIM7Q9NR12 457 aa22.03■■□□□ 1.12
COL23A1-201ENST00000390654 CISHQ9NSE2 258 aa22.03■■□□□ 1.12
COL23A1-201ENST00000390654 RPL22P35268 128 aaKnown RBP22.03■■□□□ 1.12
COL23A1-201ENST00000390654 TRIM72Q6ZMU5 477 aa22.03■■□□□ 1.12
COL23A1-201ENST00000390654 KIAA0319LQ8IZA0 1049 aa22.03■■□□□ 1.12
COL23A1-201ENST00000390654 RTKN2Q8IZC4 609 aa22.03■■□□□ 1.12
COL23A1-201ENST00000390654 WRNIP1Q96S55 665 aa22.03■■□□□ 1.12
COL23A1-201ENST00000390654 SERPINB3P29508 390 aa22.02■■□□□ 1.12
COL23A1-201ENST00000390654 NPNTQ6UXI9 565 aa22.02■■□□□ 1.12
COL23A1-201ENST00000390654 C17orf75Q9HAS0 396 aa22.02■■□□□ 1.12
COL23A1-201ENST00000390654 STK32BQ9NY57 414 aa22.02■■□□□ 1.12
COL23A1-201ENST00000390654 SRGAP2CP0DJJ0 459 aa22.02■■□□□ 1.12
COL23A1-201ENST00000390654 CNTN2Q02246 1040 aa22.02■■□□□ 1.12
COL23A1-201ENST00000390654 CIAPIN1Q6FI81 312 aa22.02■■□□□ 1.12
COL23A1-201ENST00000390654 SCYL3Q8IZE3 742 aa22.02■■□□□ 1.12
COL23A1-201ENST00000390654 XPO7Q9UIA9 1087 aaKnown RBP22.02■■□□□ 1.12
COL23A1-201ENST00000390654 GNAZP19086 355 aa22.01■■□□□ 1.11
COL23A1-201ENST00000390654 FAXCQ5TGI0 409 aa22.01■■□□□ 1.11
COL23A1-201ENST00000390654 FAM83AQ86UY5 434 aa22.01■■□□□ 1.11
COL23A1-201ENST00000390654 JDP2Q8WYK2 163 aa22.01■■□□□ 1.11
COL23A1-201ENST00000390654 ZBTB10Q96DT7 871 aa22.01■■□□□ 1.11
COL23A1-201ENST00000390654 SMNDC1O75940 238 aaKnown RBP eCLIP22.01■■□□□ 1.114e-26■■■■■ 93
COL23A1-201ENST00000390654 KRT19P08727 400 aa22.01■■□□□ 1.11
COL23A1-201ENST00000390654 BGNP21810 368 aa22.01■■□□□ 1.11
COL23A1-201ENST00000390654 CDH8P55286 799 aa22.01■■□□□ 1.11
COL23A1-201ENST00000390654 CCDC6Q16204 474 aa22.01■■□□□ 1.11
COL23A1-201ENST00000390654 RAB6CQ53S08 254 aa22.01■■□□□ 1.11
COL23A1-201ENST00000390654 DENND1BQ6P3S1 775 aa22.01■■□□□ 1.11
COL23A1-201ENST00000390654 RFX6Q8HWS3 928 aa22.01■■□□□ 1.11
COL23A1-201ENST00000390654 RAB6CQ9H0N0 254 aa22.01■■□□□ 1.11
COL23A1-201ENST00000390654 MANSC1Q9H8J5 431 aa22.01■■□□□ 1.11
COL23A1-201ENST00000390654 CENPFP49454 3210 aa22.01■■□□□ 1.11
COL23A1-201ENST00000390654 TBC1D12O60347 775 aa22■■□□□ 1.11
COL23A1-201ENST00000390654 TROVE2P10155 538 aaKnown RBP eCLIP22■■□□□ 1.11
COL23A1-201ENST00000390654 TUBP50607 506 aa22■■□□□ 1.11
COL23A1-201ENST00000390654 ARL4CP56559 192 aa22■■□□□ 1.11
COL23A1-201ENST00000390654 YWHAGP61981 247 aaKnown RBP eCLIP22■■□□□ 1.11
COL23A1-201ENST00000390654 MMRN1Q13201 1228 aa22■■□□□ 1.11
COL23A1-201ENST00000390654 SMAD1Q15797 465 aaKnown RBP22■■□□□ 1.11
COL23A1-201ENST00000390654 PARP6Q2NL67 630 aa22■■□□□ 1.11
COL23A1-201ENST00000390654 TEX2Q8IWB9 1127 aa22■■□□□ 1.11
COL23A1-201ENST00000390654 ARFGAP1Q8N6T3 406 aa22■■□□□ 1.11
COL23A1-201ENST00000390654 LPAR1Q92633 364 aa22■■□□□ 1.11
COL23A1-201ENST00000390654 VCPIP1Q96JH7 1222 aa22■■□□□ 1.11
COL23A1-201ENST00000390654 PPP1R16BQ96T49 567 aa22■■□□□ 1.11
COL23A1-201ENST00000390654 SYNCQ9H7C4 482 aa22■■□□□ 1.11
COL23A1-201ENST00000390654 PCDH9Q9HC56 1237 aa22■■□□□ 1.11
COL23A1-201ENST00000390654 STAM2O75886 525 aa22■■□□□ 1.11
COL23A1-201ENST00000390654 TDRPQ86YL5 185 aa22■■□□□ 1.11
COL23A1-201ENST00000390654 CTAGE3PQ8IX95 158 aa22■■□□□ 1.11
COL23A1-201ENST00000390654 THNSL1Q8IYQ7 743 aa22■■□□□ 1.11
COL23A1-201ENST00000390654 TMEM35BQ8NCS4 154 aa22■■□□□ 1.11
COL23A1-201ENST00000390654 SERAC1Q96JX3 654 aa22■■□□□ 1.11
COL23A1-201ENST00000390654 TEPSINQ96N21 525 aa22■■□□□ 1.11
COL23A1-201ENST00000390654 CGRRF1Q99675 332 aa22■■□□□ 1.11
COL23A1-201ENST00000390654 CADM1Q9BY67 442 aaKnown RBP22■■□□□ 1.11
COL23A1-201ENST00000390654 ZNF395Q9H8N7 513 aaPredicted RBP22■■□□□ 1.11
COL23A1-201ENST00000390654 POLIQ9UNA4 740 aa22■■□□□ 1.11
COL23A1-201ENST00000390654 CNTNAP2Q9UHC6 1331 aa22■■□□□ 1.11
COL23A1-201ENST00000390654 LOXHD1Q8IVV2 1947 aa22■■□□□ 1.11
COL23A1-201ENST00000390654 LPXNO60711 386 aa22■■□□□ 1.11
COL23A1-201ENST00000390654 CLDN10P78369 228 aa22■■□□□ 1.11
COL23A1-201ENST00000390654 EFHC2Q5JST6 749 aa22■■□□□ 1.11
COL23A1-201ENST00000390654 ABHD15Q6UXT9 468 aa22■■□□□ 1.11
COL23A1-201ENST00000390654 CCDC33Q8N5R6 958 aa22■■□□□ 1.11
COL23A1-201ENST00000390654 ATP11CQ8NB49 1132 aa22■■□□□ 1.11
COL23A1-201ENST00000390654 MECRQ9BV79 373 aa22■■□□□ 1.11
COL23A1-201ENST00000390654 BATF3Q9NR55 127 aa22■■□□□ 1.11
COL23A1-201ENST00000390654 PGAP2Q9UHJ9 254 aa22■■□□□ 1.11
COL23A1-201ENST00000390654 HACL1Q9UJ83 578 aa22■■□□□ 1.11
COL23A1-201ENST00000390654 CCDC195A0A1B0GUA6 201 aa21.99■■□□□ 1.11
COL23A1-201ENST00000390654 MT-ND3P03897 115 aa21.99■■□□□ 1.11
COL23A1-201ENST00000390654 KITP10721 976 aa21.99■■□□□ 1.11
COL23A1-201ENST00000390654 PTPN20Q4JDL3 420 aa21.99■■□□□ 1.11
COL23A1-201ENST00000390654 SLC7A3Q8WY07 619 aa21.99■■□□□ 1.11
COL23A1-201ENST00000390654 MARCOQ9UEW3 520 aaPredicted RBP21.99■■□□□ 1.11
COL23A1-201ENST00000390654 CYTH4Q9UIA0 394 aa21.99■■□□□ 1.11
COL23A1-201ENST00000390654 SHOC2Q9UQ13 582 aa21.99■■□□□ 1.11
COL23A1-201ENST00000390654 ATP5HO75947 161 aa21.99■■□□□ 1.11
COL23A1-201ENST00000390654 KRT36O76013 467 aa21.99■■□□□ 1.11
COL23A1-201ENST00000390654 KRT3P12035 628 aa21.99■■□□□ 1.11
COL23A1-201ENST00000390654 TBXAS1P24557 533 aaPredicted RBP21.99■■□□□ 1.11
COL23A1-201ENST00000390654 ELK3P41970 407 aa21.99■■□□□ 1.11
COL23A1-201ENST00000390654 FAAP100Q0VG06 881 aa21.99■■□□□ 1.11
COL23A1-201ENST00000390654 MUM1Q2TAK8 710 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms