RNA–Protein interactions for RNA: ENST00000389212.7

RAPGEF3-201, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 3,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-201ENST00000389212 CDH8P55286 799 aa12.31□□□□□ -0.44
RAPGEF3-201ENST00000389212 SYCP2LQ5T4T6 812 aa12.31□□□□□ -0.44
RAPGEF3-201ENST00000389212 OLFML1Q6UWY5 402 aa12.31□□□□□ -0.44
RAPGEF3-201ENST00000389212 PHF13Q86YI8 300 aaPredicted RBP12.31□□□□□ -0.44
RAPGEF3-201ENST00000389212 RBM12BQ8IXT5 1001 aaKnown RBP12.31□□□□□ -0.44
RAPGEF3-201ENST00000389212 EMC1Q8N766 993 aa12.31□□□□□ -0.44
RAPGEF3-201ENST00000389212 MAIP1Q8WWC4 291 aa12.31□□□□□ -0.44
RAPGEF3-201ENST00000389212 SERPINB12Q96P63 405 aa12.31□□□□□ -0.44
RAPGEF3-201ENST00000389212 SLITRK1Q96PX8 696 aa12.31□□□□□ -0.44
RAPGEF3-201ENST00000389212 LBHD1Q9BQE6 289 aaPredicted RBP12.31□□□□□ -0.44
RAPGEF3-201ENST00000389212 ROPN1BQ9BZX4 212 aaPredicted RBP12.31□□□□□ -0.44
RAPGEF3-201ENST00000389212 ROPN1Q9HAT0 212 aaPredicted RBP12.31□□□□□ -0.44
RAPGEF3-201ENST00000389212 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.31□□□□□ -0.44
RAPGEF3-201ENST00000389212 AGAP1Q9UPQ3 857 aa12.31□□□□□ -0.44
RAPGEF3-201ENST00000389212 SOWAHBA6NEL2 793 aa12.31□□□□□ -0.44
RAPGEF3-201ENST00000389212 ARIH2O95376 493 aa12.31□□□□□ -0.44
RAPGEF3-201ENST00000389212 MAGEA4P43358 317 aa12.31□□□□□ -0.44
RAPGEF3-201ENST00000389212 GCLCP48506 637 aaPredicted RBP12.31□□□□□ -0.44
RAPGEF3-201ENST00000389212 OAZ1P54368 228 aa12.31□□□□□ -0.44
RAPGEF3-201ENST00000389212 PLCB4Q15147 1175 aa12.31□□□□□ -0.44
RAPGEF3-201ENST00000389212 MAP7D1Q3KQU3 841 aa12.31□□□□□ -0.44
RAPGEF3-201ENST00000389212 TMEM154Q6P9G4 183 aa12.31□□□□□ -0.44
RAPGEF3-201ENST00000389212 TSHZ1Q6ZSZ6 1077 aa12.31□□□□□ -0.44
RAPGEF3-201ENST00000389212 ANKMY2Q8IV38 441 aa12.31□□□□□ -0.44
RAPGEF3-201ENST00000389212 CCDC89Q8N998 374 aa12.31□□□□□ -0.44
RAPGEF3-201ENST00000389212 EXD1Q8NHP7 514 aa12.31□□□□□ -0.44
RAPGEF3-201ENST00000389212 HOXC10Q9NYD6 342 aa12.31□□□□□ -0.44
RAPGEF3-201ENST00000389212 LNPEPQ9UIQ6 1025 aa12.31□□□□□ -0.44
RAPGEF3-201ENST00000389212 LIASO43766 372 aa12.3□□□□□ -0.44
RAPGEF3-201ENST00000389212 UBOX5O94941 541 aa12.3□□□□□ -0.44
RAPGEF3-201ENST00000389212 RPS12P25398 132 aaKnown RBP12.3□□□□□ -0.44
RAPGEF3-201ENST00000389212 KLRC2P26717 231 aa12.3□□□□□ -0.44
RAPGEF3-201ENST00000389212 HSDL1Q3SXM5 330 aa12.3□□□□□ -0.44
RAPGEF3-201ENST00000389212 RNF220Q5VTB9 566 aa12.3□□□□□ -0.44
RAPGEF3-201ENST00000389212 TRPM8Q7Z2W7 1104 aa12.3□□□□□ -0.44
RAPGEF3-201ENST00000389212 SAPCD2Q86UD0 394 aa12.3□□□□□ -0.44
RAPGEF3-201ENST00000389212 RHPN2Q8IUC4 686 aa12.3□□□□□ -0.44
RAPGEF3-201ENST00000389212 WDTC1Q8N5D0 677 aa12.3□□□□□ -0.44
RAPGEF3-201ENST00000389212 SPOCK2Q92563 424 aa12.3□□□□□ -0.44
RAPGEF3-201ENST00000389212 SCINQ9Y6U3 715 aa12.3□□□□□ -0.44
RAPGEF3-201ENST00000389212 TMEM191CA6NGB0 347 aa12.3□□□□□ -0.44
RAPGEF3-201ENST00000389212 C19orf81C9J6K1 198 aa12.3□□□□□ -0.44
RAPGEF3-201ENST00000389212 RASA4BC9J798 803 aa12.3□□□□□ -0.44
RAPGEF3-201ENST00000389212 ASAP2O43150 1006 aa12.3□□□□□ -0.44
RAPGEF3-201ENST00000389212 RASA4O43374 803 aa12.3□□□□□ -0.44
RAPGEF3-201ENST00000389212 SNX3O60493 162 aa12.3□□□□□ -0.44
RAPGEF3-201ENST00000389212 LDHAP00338 332 aaKnown RBP12.3□□□□□ -0.44
RAPGEF3-201ENST00000389212 ASS1P00966 412 aaKnown RBP12.3□□□□□ -0.44
RAPGEF3-201ENST00000389212 TMEM191BP0C7N4 346 aa12.3□□□□□ -0.44
RAPGEF3-201ENST00000389212 TBXAS1P24557 533 aaPredicted RBP12.3□□□□□ -0.44
RAPGEF3-201ENST00000389212 STX2P32856 288 aa12.3□□□□□ -0.44
RAPGEF3-201ENST00000389212 GJA8P48165 433 aa12.3□□□□□ -0.44
RAPGEF3-201ENST00000389212 C1QBPQ07021 282 aaKnown RBP12.3□□□□□ -0.44
RAPGEF3-201ENST00000389212 TRPC3Q13507 836 aa12.3□□□□□ -0.44
RAPGEF3-201ENST00000389212 DENND1BQ6P3S1 775 aa12.3□□□□□ -0.44
RAPGEF3-201ENST00000389212 GADL1Q6ZQY3 521 aa12.3□□□□□ -0.44
RAPGEF3-201ENST00000389212 BRSK2Q8IWQ3 736 aa12.3□□□□□ -0.44
RAPGEF3-201ENST00000389212 C4orf33Q8N1A6 199 aa12.3□□□□□ -0.44
RAPGEF3-201ENST00000389212 COPS5Q92905 334 aa12.3□□□□□ -0.44
RAPGEF3-201ENST00000389212 C12orf42Q96LP6 360 aa12.3□□□□□ -0.44
RAPGEF3-201ENST00000389212 FGD4Q96M96 766 aa12.3□□□□□ -0.44
RAPGEF3-201ENST00000389212 VPS37BQ9H9H4 285 aa12.3□□□□□ -0.44
RAPGEF3-201ENST00000389212 GINM1Q9NU53 330 aa12.3□□□□□ -0.44
RAPGEF3-201ENST00000389212 IP6K2Q9UHH9 426 aa12.3□□□□□ -0.44
RAPGEF3-201ENST00000389212 DOCK1Q14185 1865 aa12.3□□□□□ -0.44
RAPGEF3-201ENST00000389212 SGK1O00141 431 aa12.29□□□□□ -0.44
RAPGEF3-201ENST00000389212 MSCO60682 206 aa12.29□□□□□ -0.44
RAPGEF3-201ENST00000389212 ATG7O95352 703 aa12.29□□□□□ -0.44
RAPGEF3-201ENST00000389212 MAN1A1P33908 653 aa12.29□□□□□ -0.44
RAPGEF3-201ENST00000389212 WDR78Q5VTH9 848 aa12.29□□□□□ -0.44
RAPGEF3-201ENST00000389212 EEF1DP3Q658K8 133 aa12.29□□□□□ -0.44
RAPGEF3-201ENST00000389212 TRIM72Q6ZMU5 477 aa12.29□□□□□ -0.44
RAPGEF3-201ENST00000389212 SPOCD1Q6ZMY3 1216 aa12.29□□□□□ -0.44
RAPGEF3-201ENST00000389212 KIF2BQ8N4N8 673 aa12.29□□□□□ -0.44
RAPGEF3-201ENST00000389212 JOSD2Q8TAC2 188 aa12.29□□□□□ -0.44
RAPGEF3-201ENST00000389212 TGS1Q96RS0 853 aaKnown RBP12.29□□□□□ -0.44
RAPGEF3-201ENST00000389212 PCSK1NQ9UHG2 260 aa12.29□□□□□ -0.44
RAPGEF3-201ENST00000389212 PNMA3Q9UL41 463 aa12.29□□□□□ -0.44
RAPGEF3-201ENST00000389212 EXOC1LA0A1B0GW35 172 aa12.29□□□□□ -0.44
RAPGEF3-201ENST00000389212 INO80B-WBP1J3KQ70 363 aa12.29□□□□□ -0.44
RAPGEF3-201ENST00000389212 PRKCBP05771 671 aa12.29□□□□□ -0.44
RAPGEF3-201ENST00000389212 SESN3P58005 492 aa12.29□□□□□ -0.44
RAPGEF3-201ENST00000389212 LAMTOR4Q0VGL1 99 aa12.29□□□□□ -0.44
RAPGEF3-201ENST00000389212 INO80BQ9C086 356 aaPredicted RBP12.29□□□□□ -0.44
RAPGEF3-201ENST00000389212 NRBP2Q9NSY0 501 aa12.29□□□□□ -0.44
RAPGEF3-201ENST00000389212 LCTP09848 1927 aa12.29□□□□□ -0.44
RAPGEF3-201ENST00000389212 PIGRP01833 764 aa12.29□□□□□ -0.44
RAPGEF3-201ENST00000389212 CD48P09326 243 aa12.29□□□□□ -0.44
RAPGEF3-201ENST00000389212 NAT1P18440 290 aa12.29□□□□□ -0.44
RAPGEF3-201ENST00000389212 RFC1P35251 1148 aaPredicted RBP12.29□□□□□ -0.44
RAPGEF3-201ENST00000389212 VGLL4Q14135 290 aa12.29□□□□□ -0.44
RAPGEF3-201ENST00000389212 TAF5Q15542 800 aa12.29□□□□□ -0.44
RAPGEF3-201ENST00000389212 TARBP2Q15633 366 aaKnown RBP12.29□□□□□ -0.44
RAPGEF3-201ENST00000389212 ZNF699Q32M78 642 aa12.29□□□□□ -0.44
RAPGEF3-201ENST00000389212 SYDE1Q6ZW31 735 aaPredicted RBP12.29□□□□□ -0.44
RAPGEF3-201ENST00000389212 CROCCP2Q86T23 111 aa12.29□□□□□ -0.44
RAPGEF3-201ENST00000389212 ERICH1Q86X53 443 aa12.29□□□□□ -0.44
RAPGEF3-201ENST00000389212 ZBED8Q8IZ13 594 aa12.29□□□□□ -0.44
RAPGEF3-201ENST00000389212 NSRP1Q9H0G5 558 aaKnown RBP12.29□□□□□ -0.44
RAPGEF3-201ENST00000389212 CYTH4Q9UIA0 394 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms