RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 BRD9Q9H8M2 597 aa0.78□□□□□ -2.28
SNORD28-201ENST00000384706 MLXIPQ9HAP2 919 aa0.78□□□□□ -2.28
SNORD28-201ENST00000384706 TMEM184CQ9NVA4 438 aa0.78□□□□□ -2.28
SNORD28-201ENST00000384706 TFCP2L1Q9NZI6 479 aa0.78□□□□□ -2.28
SNORD28-201ENST00000384706 PI4KBQ9UBF8 816 aa0.78□□□□□ -2.28
SNORD28-201ENST00000384706 SAP30BPQ9UHR5 308 aaKnown RBP0.78□□□□□ -2.28
SNORD28-201ENST00000384706 SERTAD3Q9UJW9 196 aa0.78□□□□□ -2.28
SNORD28-201ENST00000384706 UTP18Q9Y5J1 556 aaKnown RBP eCLIP0.78□□□□□ -2.282e-26■□□□□ 8.9
SNORD28-201ENST00000384706 A0A087X0B3 334 aa0.77□□□□□ -2.29
SNORD28-201ENST00000384706 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa0.77□□□□□ -2.29
SNORD28-201ENST00000384706 TCRBV5S1A1TA0A578 114 aa0.77□□□□□ -2.29
SNORD28-201ENST00000384706 A1L4Q6 167 aa0.77□□□□□ -2.29
SNORD28-201ENST00000384706 C4orf47A7E2U8 309 aa0.77□□□□□ -2.29
SNORD28-201ENST00000384706 TMEM232C9JQI7 657 aa0.77□□□□□ -2.29
SNORD28-201ENST00000384706 H7C1Q1 480 aa0.77□□□□□ -2.29
SNORD28-201ENST00000384706 AP4M1O00189 453 aa0.77□□□□□ -2.29
SNORD28-201ENST00000384706 CDC45O75419 566 aa0.77□□□□□ -2.29
SNORD28-201ENST00000384706 GCATO75600 419 aa0.77□□□□□ -2.29
SNORD28-201ENST00000384706 SOAT2O75908 522 aa0.77□□□□□ -2.29
SNORD28-201ENST00000384706 USP1O94782 785 aa0.77□□□□□ -2.29
SNORD28-201ENST00000384706 ANXA1P04083 346 aa0.77□□□□□ -2.29
SNORD28-201ENST00000384706 CHRM5P08912 532 aaPredicted RBP0.77□□□□□ -2.29
SNORD28-201ENST00000384706 AGXTP21549 392 aa0.77□□□□□ -2.29
SNORD28-201ENST00000384706 FPR3P25089 353 aa0.77□□□□□ -2.29
SNORD28-201ENST00000384706 SMARCA1P28370 1054 aa0.77□□□□□ -2.29
SNORD28-201ENST00000384706 CDC25AP30304 524 aa0.77□□□□□ -2.29
SNORD28-201ENST00000384706 GCLCP48506 637 aaPredicted RBP0.77□□□□□ -2.29
SNORD28-201ENST00000384706 MTNR1BP49286 362 aa0.77□□□□□ -2.29
SNORD28-201ENST00000384706 TOB1P50616 345 aaPredicted RBP0.77□□□□□ -2.29
SNORD28-201ENST00000384706 HILS1P60008 231 aa0.77□□□□□ -2.29
SNORD28-201ENST00000384706 HTRA4P83105 476 aaPredicted RBP0.77□□□□□ -2.29
SNORD28-201ENST00000384706 TMPRSS15P98073 1019 aa0.77□□□□□ -2.29
SNORD28-201ENST00000384706 ID2Q02363 134 aa0.77□□□□□ -2.29
SNORD28-201ENST00000384706 FAPQ12884 760 aa0.77□□□□□ -2.29
SNORD28-201ENST00000384706 SNAPC2Q13487 334 aa0.77□□□□□ -2.29
SNORD28-201ENST00000384706 BOP1Q14137 746 aaKnown RBP0.77□□□□□ -2.29
SNORD28-201ENST00000384706 RAB39AQ14964 217 aa0.77□□□□□ -2.29
SNORD28-201ENST00000384706 DHCR24Q15392 516 aa0.77□□□□□ -2.29
SNORD28-201ENST00000384706 SF3A1Q15459 793 aaKnown RBP0.77□□□□□ -2.29
SNORD28-201ENST00000384706 FAM187BQ17R55 369 aa0.77□□□□□ -2.29
SNORD28-201ENST00000384706 CCDC144BQ3MJ40 725 aa0.77□□□□□ -2.29
SNORD28-201ENST00000384706 KHDC1Q4VXA5 237 aaKnown RBP0.77□□□□□ -2.29
SNORD28-201ENST00000384706 MEX3CQ5U5Q3 659 aaKnown RBP0.77□□□□□ -2.29
SNORD28-201ENST00000384706 DAB2IPQ5VWQ8 1189 aa0.77□□□□□ -2.29
SNORD28-201ENST00000384706 ICE2Q659A1 982 aa0.77□□□□□ -2.29
SNORD28-201ENST00000384706 FBXL22Q6P050 247 aa0.77□□□□□ -2.29
SNORD28-201ENST00000384706 LVRNQ6Q4G3 990 aa0.77□□□□□ -2.29
SNORD28-201ENST00000384706 KIRREL2Q6UWL6 708 aa0.77□□□□□ -2.29
SNORD28-201ENST00000384706 LAYNQ6UX15 382 aa0.77□□□□□ -2.29
SNORD28-201ENST00000384706 ZNF813Q6ZN06 617 aa0.77□□□□□ -2.29
SNORD28-201ENST00000384706 Q6ZWC4 215 aa0.77□□□□□ -2.29
SNORD28-201ENST00000384706 STRA8Q7Z7C7 330 aa0.77□□□□□ -2.29
SNORD28-201ENST00000384706 USP37Q86T82 979 aa0.77□□□□□ -2.29
SNORD28-201ENST00000384706 NR2C2APQ86WQ0 139 aa0.77□□□□□ -2.29
SNORD28-201ENST00000384706 TMPRSS12Q86WS5 348 aa0.77□□□□□ -2.29
SNORD28-201ENST00000384706 PDSS2Q86YH6 399 aa0.77□□□□□ -2.29
SNORD28-201ENST00000384706 ANKRD13BQ86YJ7 626 aa0.77□□□□□ -2.29
SNORD28-201ENST00000384706 RFX6Q8HWS3 928 aa0.77□□□□□ -2.29
SNORD28-201ENST00000384706 ADHFE1Q8IWW8 467 aa0.77□□□□□ -2.29
SNORD28-201ENST00000384706 SLC15A3Q8IY34 581 aa0.77□□□□□ -2.29
SNORD28-201ENST00000384706 AMOTL1Q8IY63 956 aa0.77□□□□□ -2.29
SNORD28-201ENST00000384706 FAM109AQ8N4B1 249 aa0.77□□□□□ -2.29
SNORD28-201ENST00000384706 RP9Q8TA86 221 aaKnown RBP0.77□□□□□ -2.29
SNORD28-201ENST00000384706 OSR1Q8TAX0 266 aaPredicted RBP0.77□□□□□ -2.29
SNORD28-201ENST00000384706 IFI44Q8TCB0 444 aa0.77□□□□□ -2.29
SNORD28-201ENST00000384706 ADAMTS18Q8TE60 1221 aa0.77□□□□□ -2.29
SNORD28-201ENST00000384706 DNASE2BQ8WZ79 361 aa0.77□□□□□ -2.29
SNORD28-201ENST00000384706 GLG1Q92896 1179 aa0.77□□□□□ -2.29
SNORD28-201ENST00000384706 TNPO1Q92973 898 aaKnown RBP0.77□□□□□ -2.29
SNORD28-201ENST00000384706 HDAC10Q969S8 669 aa0.77□□□□□ -2.29
SNORD28-201ENST00000384706 R3HDM4Q96D70 268 aa0.77□□□□□ -2.29
SNORD28-201ENST00000384706 MRGPRX4Q96LA9 322 aa0.77□□□□□ -2.29
SNORD28-201ENST00000384706 CCDC17Q96LX7 622 aa0.77□□□□□ -2.29
SNORD28-201ENST00000384706 C8orf37Q96NL8 207 aa0.77□□□□□ -2.29
SNORD28-201ENST00000384706 CAMK1GQ96NX5 476 aa0.77□□□□□ -2.29
SNORD28-201ENST00000384706 LENG8Q96PV6 779 aaPredicted RBP0.77□□□□□ -2.29
SNORD28-201ENST00000384706 CNPPD1Q9BV87 410 aa0.77□□□□□ -2.29
SNORD28-201ENST00000384706 DPCDQ9BVM2 203 aaPredicted RBP0.77□□□□□ -2.29
SNORD28-201ENST00000384706 FSD1LQ9BXM9 530 aa0.77□□□□□ -2.29
SNORD28-201ENST00000384706 CIPCQ9C0C6 399 aa0.77□□□□□ -2.29
SNORD28-201ENST00000384706 TTYH3Q9C0H2 523 aa0.77□□□□□ -2.29
SNORD28-201ENST00000384706 TINAGL1Q9GZM7 467 aaPredicted RBP0.77□□□□□ -2.29
SNORD28-201ENST00000384706 SIK2Q9H0K1 926 aa0.77□□□□□ -2.29
SNORD28-201ENST00000384706 GLOD4Q9HC38 313 aa0.77□□□□□ -2.29
SNORD28-201ENST00000384706 MAN1C1Q9NR34 630 aa0.77□□□□□ -2.29
SNORD28-201ENST00000384706 CCM2LQ9NUG4 571 aaPredicted RBP0.77□□□□□ -2.29
SNORD28-201ENST00000384706 TRMT13Q9NUP7 481 aaKnown RBP0.77□□□□□ -2.29
SNORD28-201ENST00000384706 GNL3LQ9NVN8 582 aaKnown RBP0.77□□□□□ -2.29
SNORD28-201ENST00000384706 ETAA1Q9NY74 926 aa0.77□□□□□ -2.29
SNORD28-201ENST00000384706 CFAP97Q9P2B7 532 aa0.77□□□□□ -2.29
SNORD28-201ENST00000384706 HEY2Q9UBP5 337 aa0.77□□□□□ -2.29
SNORD28-201ENST00000384706 LIMCH1Q9UPQ0 1083 aa0.77□□□□□ -2.29
SNORD28-201ENST00000384706 AGAP1Q9UPQ3 857 aa0.77□□□□□ -2.29
SNORD28-201ENST00000384706 MAPRE3Q9UPY8 281 aa0.77□□□□□ -2.29
SNORD28-201ENST00000384706 APOBEC2Q9Y235 224 aaKnown RBP0.77□□□□□ -2.29
SNORD28-201ENST00000384706 PLAAQ9Y263 795 aa0.77□□□□□ -2.29
SNORD28-201ENST00000384706 SSX2IPQ9Y2D8 614 aa0.77□□□□□ -2.29
SNORD28-201ENST00000384706 GPR45Q9Y5Y3 372 aa0.77□□□□□ -2.29
SNORD28-201ENST00000384706 HS3ST3B1Q9Y662 390 aa0.77□□□□□ -2.29
SNORD28-201ENST00000384706 ZMYM2Q9UBW7 1377 aa0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms