RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 RANBP9Q96S59 729 aa-1.82□□□□□ -2.7
RNU6-1340P-201ENST00000384438 PI4K2AQ9BTU6 479 aa-1.82□□□□□ -2.7
RNU6-1340P-201ENST00000384438 RPP25Q9BUL9 199 aaKnown RBP-1.82□□□□□ -2.7
RNU6-1340P-201ENST00000384438 MCRIP2Q9BUT9 160 aaKnown RBP-1.82□□□□□ -2.7
RNU6-1340P-201ENST00000384438 SF3B5Q9BWJ5 86 aaKnown RBP-1.82□□□□□ -2.7
RNU6-1340P-201ENST00000384438 GTPBP2Q9BX10 602 aaKnown RBP-1.82□□□□□ -2.7
RNU6-1340P-201ENST00000384438 GPBP1L1Q9HC44 474 aaPredicted RBP-1.82□□□□□ -2.7
RNU6-1340P-201ENST00000384438 RTN4Q9NQC3 1192 aaKnown RBP-1.82□□□□□ -2.7
RNU6-1340P-201ENST00000384438 INCENPQ9NQS7 918 aa-1.82□□□□□ -2.7
RNU6-1340P-201ENST00000384438 PICK1Q9NRD5 415 aa-1.82□□□□□ -2.7
RNU6-1340P-201ENST00000384438 RYDENQ9NUL5 291 aaKnown RBP-1.82□□□□□ -2.7
RNU6-1340P-201ENST00000384438 TMEM63CQ9P1W3 806 aa-1.82□□□□□ -2.7
RNU6-1340P-201ENST00000384438 ASIC3Q9UHC3 531 aa-1.82□□□□□ -2.7
RNU6-1340P-201ENST00000384438 WDR3Q9UNX4 943 aaKnown RBP eCLIP-1.82□□□□□ -2.7
RNU6-1340P-201ENST00000384438 RWDD3Q9Y3V2 267 aa-1.82□□□□□ -2.7
RNU6-1340P-201ENST00000384438 SHROOM3Q8TF72 1996 aa-1.82□□□□□ -2.7
RNU6-1340P-201ENST00000384438 AKAP13Q12802 2813 aa-1.82□□□□□ -2.7
RNU6-1340P-201ENST00000384438 PPP1R12BO60237 982 aaPredicted RBP-1.83□□□□□ -2.7
RNU6-1340P-201ENST00000384438 FAM189A1O60320 539 aa-1.83□□□□□ -2.7
RNU6-1340P-201ENST00000384438 CTNND1O60716 968 aaKnown RBP-1.83□□□□□ -2.7
RNU6-1340P-201ENST00000384438 RECQL5O94762 991 aaPredicted RBP-1.83□□□□□ -2.7
RNU6-1340P-201ENST00000384438 IGLV1-44P01699 117 aa-1.83□□□□□ -2.7
RNU6-1340P-201ENST00000384438 HMGCRP04035 888 aa-1.83□□□□□ -2.7
RNU6-1340P-201ENST00000384438 ELANEP08246 267 aa-1.83□□□□□ -2.7
RNU6-1340P-201ENST00000384438 ITGA2BP08514 1039 aa-1.83□□□□□ -2.7
RNU6-1340P-201ENST00000384438 UQCRFS1P1P0C7P4 283 aa-1.83□□□□□ -2.7
RNU6-1340P-201ENST00000384438 LYNX1P0DP58 116 aa-1.83□□□□□ -2.7
RNU6-1340P-201ENST00000384438 FCGR1AP12314 374 aa-1.83□□□□□ -2.7
RNU6-1340P-201ENST00000384438 ANXA7P20073 488 aaKnown RBP-1.83□□□□□ -2.7
RNU6-1340P-201ENST00000384438 CES1P23141 567 aa-1.83□□□□□ -2.7
RNU6-1340P-201ENST00000384438 CTSKP43235 329 aa-1.83□□□□□ -2.7
RNU6-1340P-201ENST00000384438 GLRBP48167 497 aa-1.83□□□□□ -2.7
RNU6-1340P-201ENST00000384438 FCGRTP55899 365 aa-1.83□□□□□ -2.7
RNU6-1340P-201ENST00000384438 ZNF91Q05481 1191 aa-1.83□□□□□ -2.7
RNU6-1340P-201ENST00000384438 HNRNPDQ14103 355 aaKnown RBP-1.83□□□□□ -2.7
RNU6-1340P-201ENST00000384438 KCTD19Q17RG1 926 aaPredicted RBP-1.83□□□□□ -2.7
RNU6-1340P-201ENST00000384438 SKIDA1Q1XH10 827 aa-1.83□□□□□ -2.7
RNU6-1340P-201ENST00000384438 TUSC1Q2TAM9 212 aa-1.83□□□□□ -2.7
RNU6-1340P-201ENST00000384438 RABL6Q3YEC7 729 aaPredicted RBP-1.83□□□□□ -2.7
RNU6-1340P-201ENST00000384438 ZNF876PQ49A33 203 aa-1.83□□□□□ -2.7
RNU6-1340P-201ENST00000384438 MANEAQ5SRI9 462 aa-1.83□□□□□ -2.7
RNU6-1340P-201ENST00000384438 B3GNTL1Q67FW5 361 aaPredicted RBP-1.83□□□□□ -2.7
RNU6-1340P-201ENST00000384438 NUGGCQ68CJ6 796 aa-1.83□□□□□ -2.7
RNU6-1340P-201ENST00000384438 BTNL9Q6UXG8 535 aa-1.83□□□□□ -2.7
RNU6-1340P-201ENST00000384438 PAMR1Q6UXH9 720 aa-1.83□□□□□ -2.7
RNU6-1340P-201ENST00000384438 VITQ6UXI7 678 aa-1.83□□□□□ -2.7
RNU6-1340P-201ENST00000384438 CYP2R1Q6VVX0 501 aa-1.83□□□□□ -2.7
RNU6-1340P-201ENST00000384438 USP53Q70EK8 1073 aa-1.83□□□□□ -2.7
RNU6-1340P-201ENST00000384438 MILR1Q7Z6M3 343 aa-1.83□□□□□ -2.7
RNU6-1340P-201ENST00000384438 FILIP1Q7Z7B0 1213 aa-1.83□□□□□ -2.7
RNU6-1340P-201ENST00000384438 RTN4RL1Q86UN2 441 aaPredicted RBP-1.83□□□□□ -2.7
RNU6-1340P-201ENST00000384438 ANKRD13BQ86YJ7 626 aa-1.83□□□□□ -2.7
RNU6-1340P-201ENST00000384438 CCNJLQ8IV13 435 aa-1.83□□□□□ -2.7
RNU6-1340P-201ENST00000384438 MRPL41Q8IXM3 137 aaKnown RBP-1.83□□□□□ -2.7
RNU6-1340P-201ENST00000384438 ZBED8Q8IZ13 594 aa-1.83□□□□□ -2.7
RNU6-1340P-201ENST00000384438 NAGSQ8N159 534 aa-1.83□□□□□ -2.7
RNU6-1340P-201ENST00000384438 GPD1LQ8N335 351 aa-1.83□□□□□ -2.7
RNU6-1340P-201ENST00000384438 RNF182Q8N6D2 247 aa-1.83□□□□□ -2.7
RNU6-1340P-201ENST00000384438 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP-1.83□□□□□ -2.7
RNU6-1340P-201ENST00000384438 B3GALNT2Q8NCR0 500 aa-1.83□□□□□ -2.7
RNU6-1340P-201ENST00000384438 ARRDC4Q8NCT1 418 aa-1.83□□□□□ -2.7
RNU6-1340P-201ENST00000384438 PPP1R14CQ8TAE6 165 aa-1.83□□□□□ -2.7
RNU6-1340P-201ENST00000384438 SPATA20Q8TB22 786 aa-1.83□□□□□ -2.7
RNU6-1340P-201ENST00000384438 FBXO30Q8TB52 745 aa-1.83□□□□□ -2.7
RNU6-1340P-201ENST00000384438 TSKUQ8WUA8 353 aa-1.83□□□□□ -2.7
RNU6-1340P-201ENST00000384438 SEC14L1Q92503 715 aa-1.83□□□□□ -2.7
RNU6-1340P-201ENST00000384438 NACC2Q96BF6 587 aa-1.83□□□□□ -2.7
RNU6-1340P-201ENST00000384438 LRRC58Q96CX6 371 aa-1.83□□□□□ -2.7
RNU6-1340P-201ENST00000384438 ART5Q96L15 291 aa-1.83□□□□□ -2.7
RNU6-1340P-201ENST00000384438 STACQ99469 402 aa-1.83□□□□□ -2.7
RNU6-1340P-201ENST00000384438 PDCD2LQ9BRP1 358 aa-1.83□□□□□ -2.7
RNU6-1340P-201ENST00000384438 SYT11Q9BT88 431 aa-1.83□□□□□ -2.7
RNU6-1340P-201ENST00000384438 TRIM55Q9BYV6 548 aa-1.83□□□□□ -2.7
RNU6-1340P-201ENST00000384438 TRIM6Q9C030 488 aaPredicted RBP-1.83□□□□□ -2.7
RNU6-1340P-201ENST00000384438 KCNN2Q9H2S1 579 aa-1.83□□□□□ -2.7
RNU6-1340P-201ENST00000384438 ZNF576Q9H609 170 aa-1.83□□□□□ -2.7
RNU6-1340P-201ENST00000384438 SMPD3Q9NY59 655 aaPredicted RBP-1.83□□□□□ -2.7
RNU6-1340P-201ENST00000384438 PLK2Q9NYY3 685 aa-1.83□□□□□ -2.7
RNU6-1340P-201ENST00000384438 SRP68Q9UHB9 627 aaKnown RBP-1.83□□□□□ -2.7
RNU6-1340P-201ENST00000384438 CTDP1Q9Y5B0 961 aaPredicted RBP-1.83□□□□□ -2.7
RNU6-1340P-201ENST00000384438 MEGF6O75095 1541 aa-1.83□□□□□ -2.7
RNU6-1340P-201ENST00000384438 CKAP5Q14008 2032 aa-1.83□□□□□ -2.7
RNU6-1340P-201ENST00000384438 COL4A1P02462 1669 aa-1.83□□□□□ -2.7
RNU6-1340P-201ENST00000384438 DLG5Q8TDM6 1919 aa-1.83□□□□□ -2.7
RNU6-1340P-201ENST00000384438 PKHD1P08F94 4074 aa-1.84□□□□□ -2.7
RNU6-1340P-201ENST00000384438 MAP1BP46821 2468 aaKnown RBP-1.84□□□□□ -2.7
RNU6-1340P-201ENST00000384438 C2orf16Q68DN1 1984 aa-1.84□□□□□ -2.7
RNU6-1340P-201ENST00000384438 IGKV2D-24A0A075B6R9 120 aa-1.84□□□□□ -2.7
RNU6-1340P-201ENST00000384438 A0A0U1RQS6 177 aa-1.84□□□□□ -2.7
RNU6-1340P-201ENST00000384438 ADM5C9JUS6 153 aa-1.84□□□□□ -2.7
RNU6-1340P-201ENST00000384438 J3QRE1 110 aa-1.84□□□□□ -2.7
RNU6-1340P-201ENST00000384438 CTIFO43310 598 aaKnown RBP-1.84□□□□□ -2.7
RNU6-1340P-201ENST00000384438 PNPP00491 289 aa-1.84□□□□□ -2.7
RNU6-1340P-201ENST00000384438 IGKV1-16P04430 117 aa-1.84□□□□□ -2.7
RNU6-1340P-201ENST00000384438 PATE4P0C8F1 98 aa-1.84□□□□□ -2.7
RNU6-1340P-201ENST00000384438 GNAT2P19087 354 aa-1.84□□□□□ -2.7
RNU6-1340P-201ENST00000384438 TBXAS1P24557 533 aaPredicted RBP-1.84□□□□□ -2.7
RNU6-1340P-201ENST00000384438 GDF1P27539 372 aa-1.84□□□□□ -2.7
RNU6-1340P-201ENST00000384438 FLT3P36888 993 aa-1.84□□□□□ -2.7
RNU6-1340P-201ENST00000384438 GJA8P48165 433 aa-1.84□□□□□ -2.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms