RNA–Protein interactions for RNA: ENST00000383861.1

RNU1-28P-201, Transcript of RNA, U1 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU1-28P, Length 164 nt, Biotype snRNA, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-28P-201ENST00000383861 MED10Q9BTT4 135 aa9.36□□□□□ -0.91
RNU1-28P-201ENST00000383861 NUP85Q9BW27 656 aa9.36□□□□□ -0.91
RNU1-28P-201ENST00000383861 DUSP16Q9BY84 665 aa9.36□□□□□ -0.91
RNU1-28P-201ENST00000383861 CWH43Q9H720 699 aa9.36□□□□□ -0.91
RNU1-28P-201ENST00000383861 RRAGDQ9NQL2 400 aaPredicted RBP9.36□□□□□ -0.91
RNU1-28P-201ENST00000383861 FAM49BQ9NUQ9 324 aa9.36□□□□□ -0.91
RNU1-28P-201ENST00000383861 TRIM10Q9UDY6 481 aa9.36□□□□□ -0.91
RNU1-28P-201ENST00000383861 TIMM13Q9Y5L4 95 aaPredicted RBP9.36□□□□□ -0.91
RNU1-28P-201ENST00000383861 SLC4A7Q9Y6M7 1214 aa9.36□□□□□ -0.91
RNU1-28P-201ENST00000383861 TTC3P53804 2025 aa9.36□□□□□ -0.91
RNU1-28P-201ENST00000383861 TRIP11Q15643 1979 aa9.35□□□□□ -0.91
RNU1-28P-201ENST00000383861 TDRD15B5MCY1 1934 aaKnown RBP9.35□□□□□ -0.91
RNU1-28P-201ENST00000383861 A0A0U1RQJ8 604 aa9.35□□□□□ -0.91
RNU1-28P-201ENST00000383861 I3L4J1 428 aa9.35□□□□□ -0.91
RNU1-28P-201ENST00000383861 MYO1FO00160 1098 aa9.35□□□□□ -0.91
RNU1-28P-201ENST00000383861 XPO1O14980 1071 aaKnown RBP9.35□□□□□ -0.91
RNU1-28P-201ENST00000383861 BUB1O43683 1085 aa9.35□□□□□ -0.91
RNU1-28P-201ENST00000383861 B4GALT3O60512 393 aa9.35□□□□□ -0.91
RNU1-28P-201ENST00000383861 PALMO75781 387 aa9.35□□□□□ -0.91
RNU1-28P-201ENST00000383861 GJB5O95377 273 aa9.35□□□□□ -0.91
RNU1-28P-201ENST00000383861 ITGB1P05556 798 aa9.35□□□□□ -0.91
RNU1-28P-201ENST00000383861 CFHP08603 1231 aa9.35□□□□□ -0.91
RNU1-28P-201ENST00000383861 PRLRP16471 622 aa9.35□□□□□ -0.91
RNU1-28P-201ENST00000383861 NPR3P17342 541 aa9.35□□□□□ -0.91
RNU1-28P-201ENST00000383861 RRM1P23921 792 aa9.35□□□□□ -0.91
RNU1-28P-201ENST00000383861 ADORA2BP29275 332 aa9.35□□□□□ -0.91
RNU1-28P-201ENST00000383861 SCNN1AP37088 669 aa9.35□□□□□ -0.91
RNU1-28P-201ENST00000383861 SLC1A1P43005 524 aa9.35□□□□□ -0.91
RNU1-28P-201ENST00000383861 PLA2G4AP47712 749 aa9.35□□□□□ -0.91
RNU1-28P-201ENST00000383861 PSMC1P62191 440 aaKnown RBP9.35□□□□□ -0.91
RNU1-28P-201ENST00000383861 HTRA4P83105 476 aaPredicted RBP9.35□□□□□ -0.91
RNU1-28P-201ENST00000383861 KRT17Q04695 432 aa9.35□□□□□ -0.91
RNU1-28P-201ENST00000383861 PTP4A2Q12974 167 aa9.35□□□□□ -0.91
RNU1-28P-201ENST00000383861 PDCLQ13371 301 aa9.35□□□□□ -0.91
RNU1-28P-201ENST00000383861 MRPL58Q14197 206 aaKnown RBP9.35□□□□□ -0.91
RNU1-28P-201ENST00000383861 SCN5AQ14524 2016 aa9.35□□□□□ -0.91
RNU1-28P-201ENST00000383861 USP41Q3LFD5 358 aa9.35□□□□□ -0.91
RNU1-28P-201ENST00000383861 MDH1BQ5I0G3 518 aa9.35□□□□□ -0.91
RNU1-28P-201ENST00000383861 PLEKHA7Q6IQ23 1121 aa9.35□□□□□ -0.91
RNU1-28P-201ENST00000383861 C11orf63Q6NUN7 778 aa9.35□□□□□ -0.91
RNU1-28P-201ENST00000383861 DNAJC24Q6P3W2 148 aa9.35□□□□□ -0.91
RNU1-28P-201ENST00000383861 KCNT2Q6UVM3 1135 aa9.35□□□□□ -0.91
RNU1-28P-201ENST00000383861 MMS22LQ6ZRQ5 1243 aa9.35□□□□□ -0.91
RNU1-28P-201ENST00000383861 C16orf59Q7L2K0 433 aa9.35□□□□□ -0.91
RNU1-28P-201ENST00000383861 TMEM110Q86TL2 294 aa9.35□□□□□ -0.91
RNU1-28P-201ENST00000383861 GPR65Q8IYL9 337 aa9.35□□□□□ -0.91
RNU1-28P-201ENST00000383861 FUKQ8N0W3 1084 aa9.35□□□□□ -0.91
RNU1-28P-201ENST00000383861 FIBCD1Q8N539 461 aa9.35□□□□□ -0.91
RNU1-28P-201ENST00000383861 WDTC1Q8N5D0 677 aa9.35□□□□□ -0.91
RNU1-28P-201ENST00000383861 C3orf20Q8ND61 904 aa9.35□□□□□ -0.91
RNU1-28P-201ENST00000383861 UBA3Q8TBC4 463 aa9.35□□□□□ -0.91
RNU1-28P-201ENST00000383861 FEZF2Q8TBJ5 459 aa9.35□□□□□ -0.91
RNU1-28P-201ENST00000383861 ZNF564Q8TBZ8 553 aaPredicted RBP9.35□□□□□ -0.91
RNU1-28P-201ENST00000383861 SLC2A14Q8TDB8 520 aa9.35□□□□□ -0.91
RNU1-28P-201ENST00000383861 C2orf15Q8WU43 125 aaKnown RBP9.35□□□□□ -0.91
RNU1-28P-201ENST00000383861 ATRIPQ8WXE1 791 aa9.35□□□□□ -0.91
RNU1-28P-201ENST00000383861 KCTD13Q8WZ19 329 aa9.35□□□□□ -0.91
RNU1-28P-201ENST00000383861 SMARCD1Q96GM5 515 aa9.35□□□□□ -0.91
RNU1-28P-201ENST00000383861 TMEM169Q96HH4 297 aa9.35□□□□□ -0.91
RNU1-28P-201ENST00000383861 FUBP3Q96I24 572 aaKnown RBP eCLIP9.35□□□□□ -0.91
RNU1-28P-201ENST00000383861 IGSF21Q96ID5 467 aa9.35□□□□□ -0.91
RNU1-28P-201ENST00000383861 WDR24Q96S15 920 aa9.35□□□□□ -0.91
RNU1-28P-201ENST00000383861 RAD9AQ99638 391 aa9.35□□□□□ -0.91
RNU1-28P-201ENST00000383861 TTPALQ9BTX7 342 aa9.35□□□□□ -0.91
RNU1-28P-201ENST00000383861 SLC4A5Q9BY07 1137 aa9.35□□□□□ -0.91
RNU1-28P-201ENST00000383861 IRX2Q9BZI1 471 aaPredicted RBP9.35□□□□□ -0.91
RNU1-28P-201ENST00000383861 ZCWPW1Q9H0M4 648 aa9.35□□□□□ -0.91
RNU1-28P-201ENST00000383861 DPEP3Q9H4B8 488 aa9.35□□□□□ -0.91
RNU1-28P-201ENST00000383861 RC3H2Q9HBD1 1191 aaKnown RBP9.35□□□□□ -0.91
RNU1-28P-201ENST00000383861 PNPLA8Q9NP80 782 aa9.35□□□□□ -0.91
RNU1-28P-201ENST00000383861 MARCH5Q9NX47 278 aa9.35□□□□□ -0.91
RNU1-28P-201ENST00000383861 SPG21Q9NZD8 308 aa9.35□□□□□ -0.91
RNU1-28P-201ENST00000383861 AMFRQ9UKV5 643 aa9.35□□□□□ -0.91
RNU1-28P-201ENST00000383861 TFR2Q9UP52 801 aa9.35□□□□□ -0.91
RNU1-28P-201ENST00000383861 SSX2IPQ9Y2D8 614 aa9.35□□□□□ -0.91
RNU1-28P-201ENST00000383861 RWDD3Q9Y3V2 267 aa9.35□□□□□ -0.91
RNU1-28P-201ENST00000383861 NME7Q9Y5B8 376 aa9.35□□□□□ -0.91
RNU1-28P-201ENST00000383861 PCDHB12Q9Y5F1 795 aa9.35□□□□□ -0.91
RNU1-28P-201ENST00000383861 LTBP2Q14767 1821 aa9.35□□□□□ -0.91
RNU1-28P-201ENST00000383861 SCN1AP35498 2009 aa9.34□□□□□ -0.91
RNU1-28P-201ENST00000383861 SIGLEC16A6NMB1 481 aa9.34□□□□□ -0.91
RNU1-28P-201ENST00000383861 MIF4GDA9UHW6 222 aaKnown RBP9.34□□□□□ -0.91
RNU1-28P-201ENST00000383861 SART1O43290 800 aaKnown RBP9.34□□□□□ -0.91
RNU1-28P-201ENST00000383861 ATP2C2O75185 946 aa9.34□□□□□ -0.91
RNU1-28P-201ENST00000383861 FBXO21O94952 628 aa9.34□□□□□ -0.91
RNU1-28P-201ENST00000383861 ABL1P00519 1130 aa9.34□□□□□ -0.91
RNU1-28P-201ENST00000383861 CCDC130P13994 396 aa9.34□□□□□ -0.91
RNU1-28P-201ENST00000383861 TCP1P17987 556 aaKnown RBP9.34□□□□□ -0.91
RNU1-28P-201ENST00000383861 ACAT1P24752 427 aaKnown RBP9.34□□□□□ -0.91
RNU1-28P-201ENST00000383861 TKTP29401 623 aaKnown RBP9.34□□□□□ -0.91
RNU1-28P-201ENST00000383861 SSTR3P32745 418 aaPredicted RBP9.34□□□□□ -0.91
RNU1-28P-201ENST00000383861 RPL34P49207 117 aaKnown RBP9.34□□□□□ -0.91
RNU1-28P-201ENST00000383861 CREMQ03060 361 aa9.34□□□□□ -0.91
RNU1-28P-201ENST00000383861 PDE4CQ08493 712 aa9.34□□□□□ -0.91
RNU1-28P-201ENST00000383861 MAMLD1Q13495 774 aa9.34□□□□□ -0.91
RNU1-28P-201ENST00000383861 ACAP1Q15027 740 aa9.34□□□□□ -0.91
RNU1-28P-201ENST00000383861 PTPN20Q4JDL3 420 aa9.34□□□□□ -0.91
RNU1-28P-201ENST00000383861 CTXN3Q4LDR2 81 aa9.34□□□□□ -0.91
RNU1-28P-201ENST00000383861 VARS2Q5ST30 1063 aaKnown RBP9.34□□□□□ -0.91
RNU1-28P-201ENST00000383861 KIAA1841Q6NSI8 718 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms