RNA–Protein interactions for RNA: ENST00000383831.7

CPNE9-202, Transcript of copine family member 9, humanhuman

TSL 5 BASIC

Gene CPNE9, Length 1,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-202ENST00000383831 TUSC3Q13454 348 aa21.43■■□□□ 1.02
CPNE9-202ENST00000383831 CCDC70Q6NSX1 233 aa21.43■■□□□ 1.02
CPNE9-202ENST00000383831 DSTYKQ6XUX3 929 aa21.43■■□□□ 1.02
CPNE9-202ENST00000383831 JOSD2Q8TAC2 188 aa21.43■■□□□ 1.02
CPNE9-202ENST00000383831 MCRS1Q96EZ8 462 aa21.43■■□□□ 1.02
CPNE9-202ENST00000383831 TNIP3Q96KP6 325 aa21.43■■□□□ 1.02
CPNE9-202ENST00000383831 KRT12Q99456 494 aa21.43■■□□□ 1.02
CPNE9-202ENST00000383831 FTHL17Q9BXU8 183 aa21.43■■□□□ 1.02
CPNE9-202ENST00000383831 DNAI2Q9GZS0 605 aa21.43■■□□□ 1.02
CPNE9-202ENST00000383831 METTL5Q9NRN9 209 aaKnown RBP21.43■■□□□ 1.02
CPNE9-202ENST00000383831 LCMT1Q9UIC8 334 aa21.43■■□□□ 1.02
CPNE9-202ENST00000383831 E5RJQ4 531 aa21.43■■□□□ 1.02
CPNE9-202ENST00000383831 PIK3R2O00459 728 aa21.43■■□□□ 1.02
CPNE9-202ENST00000383831 PITPNM1O00562 1244 aa21.43■■□□□ 1.02
CPNE9-202ENST00000383831 SETSIPP0DME0 302 aa21.43■■□□□ 1.02
CPNE9-202ENST00000383831 ACAT1P24752 427 aaKnown RBP21.43■■□□□ 1.02
CPNE9-202ENST00000383831 RFC1P35251 1148 aaPredicted RBP21.43■■□□□ 1.02
CPNE9-202ENST00000383831 RGS7P49802 495 aa21.43■■□□□ 1.02
CPNE9-202ENST00000383831 MNX1P50219 401 aaPredicted RBP21.43■■□□□ 1.02
CPNE9-202ENST00000383831 PDE4CQ08493 712 aa21.43■■□□□ 1.02
CPNE9-202ENST00000383831 SEL1L2Q5TEA6 688 aa21.43■■□□□ 1.02
CPNE9-202ENST00000383831 C8orf74Q6P047 294 aa21.43■■□□□ 1.02
CPNE9-202ENST00000383831 PMF1Q6P1K2 205 aa21.43■■□□□ 1.02
CPNE9-202ENST00000383831 WDR93Q6P2C0 686 aa21.43■■□□□ 1.02
CPNE9-202ENST00000383831 B3GALNT2Q8NCR0 500 aa21.43■■□□□ 1.02
CPNE9-202ENST00000383831 HDAC7Q8WUI4 952 aa21.43■■□□□ 1.02
CPNE9-202ENST00000383831 SLC35F5Q8WV83 523 aa21.43■■□□□ 1.02
CPNE9-202ENST00000383831 DDX27Q96GQ7 796 aaKnown RBP21.43■■□□□ 1.02
CPNE9-202ENST00000383831 ATP2C2O75185 946 aa21.42■■□□□ 1.02
CPNE9-202ENST00000383831 TIGD5Q53EQ6 642 aa21.42■■□□□ 1.02
CPNE9-202ENST00000383831 PLEKHG4Q58EX7 1191 aa21.42■■□□□ 1.02
CPNE9-202ENST00000383831 CLLU1OSQ5K130 101 aa21.42■■□□□ 1.02
CPNE9-202ENST00000383831 GLB1LQ6UWU2 654 aa21.42■■□□□ 1.02
CPNE9-202ENST00000383831 CD300LGQ6UXG3 332 aa21.42■■□□□ 1.02
CPNE9-202ENST00000383831 KLHL7Q8IXQ5 586 aa21.42■■□□□ 1.02
CPNE9-202ENST00000383831 TMEM86AQ8N2M4 240 aa21.42■■□□□ 1.02
CPNE9-202ENST00000383831 ANKRD52Q8NB46 1076 aa21.42■■□□□ 1.02
CPNE9-202ENST00000383831 SLC2A14Q8TDB8 520 aa21.42■■□□□ 1.02
CPNE9-202ENST00000383831 SLC4A5Q9BY07 1137 aa21.42■■□□□ 1.02
CPNE9-202ENST00000383831 CRISPLD2Q9H0B8 497 aa21.42■■□□□ 1.02
CPNE9-202ENST00000383831 F8VP50 259 aa21.41■■□□□ 1.02
CPNE9-202ENST00000383831 PSTPIP1O43586 416 aa21.41■■□□□ 1.02
CPNE9-202ENST00000383831 TKTP29401 623 aaKnown RBP21.41■■□□□ 1.02
CPNE9-202ENST00000383831 BST2Q10589 180 aaKnown RBP21.41■■□□□ 1.02
CPNE9-202ENST00000383831 BRD3Q15059 726 aa21.41■■□□□ 1.02
CPNE9-202ENST00000383831 CCDC142Q17RM4 750 aa21.41■■□□□ 1.02
CPNE9-202ENST00000383831 PAN2Q504Q3 1202 aaKnown RBP21.41■■□□□ 1.02
CPNE9-202ENST00000383831 KIAA0319Q5VV43 1072 aa21.41■■□□□ 1.02
CPNE9-202ENST00000383831 SLC39A5Q6ZMH5 540 aa21.41■■□□□ 1.02
CPNE9-202ENST00000383831 FAM183BPQ6ZVS7 135 aa21.41■■□□□ 1.02
CPNE9-202ENST00000383831 ADAT2Q7Z6V5 191 aaKnown RBP21.41■■□□□ 1.02
CPNE9-202ENST00000383831 RHOT1Q8IXI2 618 aa21.41■■□□□ 1.02
CPNE9-202ENST00000383831 DBF4BQ8NFT6 615 aa21.41■■□□□ 1.02
CPNE9-202ENST00000383831 UROC1Q96N76 676 aa21.41■■□□□ 1.02
CPNE9-202ENST00000383831 NAP1L3Q99457 506 aaPredicted RBP21.41■■□□□ 1.02
CPNE9-202ENST00000383831 DDX43Q9NXZ2 648 aaKnown RBP21.41■■□□□ 1.02
CPNE9-202ENST00000383831 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.41■■□□□ 1.02
CPNE9-202ENST00000383831 NR2E1Q9Y466 385 aa21.41■■□□□ 1.02
CPNE9-202ENST00000383831 TIMM13Q9Y5L4 95 aaPredicted RBP21.41■■□□□ 1.02
CPNE9-202ENST00000383831 CCDC151A5D8V7 595 aa21.41■■□□□ 1.02
CPNE9-202ENST00000383831 CCDC188H7C350 402 aa21.41■■□□□ 1.02
CPNE9-202ENST00000383831 B3GAT3O94766 335 aa21.41■■□□□ 1.02
CPNE9-202ENST00000383831 TUBBP07437 444 aa21.41■■□□□ 1.02
CPNE9-202ENST00000383831 PTPN1P18031 435 aaKnown RBP21.41■■□□□ 1.02
CPNE9-202ENST00000383831 BCAT1P54687 386 aa21.41■■□□□ 1.02
CPNE9-202ENST00000383831 SLC7A5Q01650 507 aa21.41■■□□□ 1.02
CPNE9-202ENST00000383831 PIGHQ14442 188 aaPredicted RBP21.41■■□□□ 1.02
CPNE9-202ENST00000383831 CLUL1Q15846 466 aa21.41■■□□□ 1.02
CPNE9-202ENST00000383831 GLE1Q53GS7 698 aaKnown RBP21.41■■□□□ 1.02
CPNE9-202ENST00000383831 FAM102AQ5T9C2 384 aaPredicted RBP21.41■■□□□ 1.02
CPNE9-202ENST00000383831 OR6B2Q6IFH4 312 aa21.41■■□□□ 1.02
CPNE9-202ENST00000383831 EMC1Q8N766 993 aa21.41■■□□□ 1.02
CPNE9-202ENST00000383831 NIPA2Q8N8Q9 360 aa21.41■■□□□ 1.02
CPNE9-202ENST00000383831 MIS12Q9H081 205 aa21.41■■□□□ 1.02
CPNE9-202ENST00000383831 DMGDHQ9UI17 866 aaKnown RBP21.41■■□□□ 1.02
CPNE9-202ENST00000383831 I3L4J1 428 aa21.4■■□□□ 1.02
CPNE9-202ENST00000383831 ZMYND10O75800 440 aa21.4■■□□□ 1.02
CPNE9-202ENST00000383831 GABBR2O75899 941 aa21.4■■□□□ 1.02
CPNE9-202ENST00000383831 TCF4P15884 667 aa21.4■■□□□ 1.02
CPNE9-202ENST00000383831 SSR1P43307 286 aaKnown RBP21.4■■□□□ 1.02
CPNE9-202ENST00000383831 BRCC3P46736 316 aa21.4■■□□□ 1.02
CPNE9-202ENST00000383831 LHX1P48742 406 aa21.4■■□□□ 1.02
CPNE9-202ENST00000383831 CC2D1AQ6P1N0 951 aaPredicted RBP21.4■■□□□ 1.02
CPNE9-202ENST00000383831 ANKRD33Q7Z3H0 272 aa21.4■■□□□ 1.02
CPNE9-202ENST00000383831 TMEM110Q86TL2 294 aa21.4■■□□□ 1.02
CPNE9-202ENST00000383831 HASPINQ8TF76 798 aa21.4■■□□□ 1.02
CPNE9-202ENST00000383831 STK32AQ8WU08 396 aa21.4■■□□□ 1.02
CPNE9-202ENST00000383831 PIWIL1Q96J94 861 aaKnown RBP21.4■■□□□ 1.02
CPNE9-202ENST00000383831 TSC2P49815 1807 aa21.4■■□□□ 1.02
CPNE9-202ENST00000383831 TANC1Q9C0D5 1861 aa21.39■■□□□ 1.02
CPNE9-202ENST00000383831 ENPP3O14638 875 aa21.39■■□□□ 1.01
CPNE9-202ENST00000383831 B4GALT3O60512 393 aa21.39■■□□□ 1.01
CPNE9-202ENST00000383831 PSMA2P25787 234 aa21.39■■□□□ 1.01
CPNE9-202ENST00000383831 TCTN1Q2MV58 587 aa21.39■■□□□ 1.01
CPNE9-202ENST00000383831 NOMO2Q5JPE7 1267 aa21.39■■□□□ 1.01
CPNE9-202ENST00000383831 FNIP1Q8TF40 1166 aa21.39■■□□□ 1.01
CPNE9-202ENST00000383831 ZNF333Q96JL9 665 aa21.39■■□□□ 1.01
CPNE9-202ENST00000383831 HNRNPABQ99729 332 aaKnown RBP21.39■■□□□ 1.01
CPNE9-202ENST00000383831 HINFPQ9BQA5 517 aa21.39■■□□□ 1.01
CPNE9-202ENST00000383831 DDX47Q9H0S4 455 aaKnown RBP21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms