RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 UBE4BO95155 1302 aa15.69■□□□□ 0.1
CTNS-202ENST00000381870 MT-ND3P03897 115 aa15.69■□□□□ 0.1
CTNS-202ENST00000381870 STIP1P31948 543 aaKnown RBP15.69■□□□□ 0.1
CTNS-202ENST00000381870 RPL5P46777 297 aaKnown RBP15.69■□□□□ 0.1
CTNS-202ENST00000381870 MFAP3P55082 362 aa15.69■□□□□ 0.1
CTNS-202ENST00000381870 MPP3Q13368 585 aa15.69■□□□□ 0.1
CTNS-202ENST00000381870 CYLC2Q14093 348 aaPredicted RBP15.69■□□□□ 0.1
CTNS-202ENST00000381870 TRIP10Q15642 601 aa15.69■□□□□ 0.1
CTNS-202ENST00000381870 EFHC1Q5JVL4 640 aa15.69■□□□□ 0.1
CTNS-202ENST00000381870 FNBP1LQ5T0N5 605 aa15.69■□□□□ 0.1
CTNS-202ENST00000381870 ARID3BQ8IVW6 561 aaPredicted RBP15.69■□□□□ 0.1
CTNS-202ENST00000381870 ALLCQ8N6M5 410 aa15.69■□□□□ 0.1
CTNS-202ENST00000381870 ZBTB8BQ8NAP8 495 aaPredicted RBP15.69■□□□□ 0.1
CTNS-202ENST00000381870 ZFP28Q8NHY6 868 aa15.69■□□□□ 0.1
CTNS-202ENST00000381870 PYROXD1Q8WU10 500 aa15.69■□□□□ 0.1
CTNS-202ENST00000381870 FAM20AQ96MK3 541 aa15.69■□□□□ 0.1
CTNS-202ENST00000381870 HSD17B14Q9BPX1 270 aa15.69■□□□□ 0.1
CTNS-202ENST00000381870 CCDC106Q9BWC9 280 aa15.69■□□□□ 0.1
CTNS-202ENST00000381870 YIPF2Q9BWQ6 316 aa15.69■□□□□ 0.1
CTNS-202ENST00000381870 GRIP2Q9C0E4 1043 aa15.69■□□□□ 0.1
CTNS-202ENST00000381870 IGKV6D-41A0A0C4DH26 115 aa15.69■□□□□ 0.1
CTNS-202ENST00000381870 TMEM221A6NGB7 291 aa15.69■□□□□ 0.1
CTNS-202ENST00000381870 BTBD19C9JJ37 291 aa15.69■□□□□ 0.1
CTNS-202ENST00000381870 ATP2A1O14983 1001 aa15.69■□□□□ 0.1
CTNS-202ENST00000381870 PROSCO94903 275 aa15.69■□□□□ 0.1
CTNS-202ENST00000381870 CLPTM1O96005 669 aa15.69■□□□□ 0.1
CTNS-202ENST00000381870 CPOXP36551 454 aa15.69■□□□□ 0.1
CTNS-202ENST00000381870 ITPK1Q13572 414 aa15.69■□□□□ 0.1
CTNS-202ENST00000381870 CCNIQ14094 377 aa15.69■□□□□ 0.1
CTNS-202ENST00000381870 HIF1AQ16665 826 aa15.69■□□□□ 0.1
CTNS-202ENST00000381870 CES4AQ5XG92 561 aa15.69■□□□□ 0.1
CTNS-202ENST00000381870 STXBP4Q6ZWJ1 553 aa15.69■□□□□ 0.1
CTNS-202ENST00000381870 TAB3Q8N5C8 712 aaPredicted RBP15.69■□□□□ 0.1
CTNS-202ENST00000381870 ALKBH8Q96BT7 664 aaKnown RBP15.69■□□□□ 0.1
CTNS-202ENST00000381870 GCNAQ96QF7 691 aa15.69■□□□□ 0.1
CTNS-202ENST00000381870 ARHGEF38Q9NXL2 777 aa15.69■□□□□ 0.1
CTNS-202ENST00000381870 KCNK4Q9NYG8 393 aa15.69■□□□□ 0.1
CTNS-202ENST00000381870 POLIQ9UNA4 740 aa15.69■□□□□ 0.1
CTNS-202ENST00000381870 CDK5RAP2Q96SN8 1893 aa15.68■□□□□ 0.1
CTNS-202ENST00000381870 P4HA2O15460 535 aa15.68■□□□□ 0.1
CTNS-202ENST00000381870 IFNB1P01574 187 aa15.68■□□□□ 0.1
CTNS-202ENST00000381870 ALDH1B1P30837 517 aa15.68■□□□□ 0.1
CTNS-202ENST00000381870 RHBDL3P58872 404 aa15.68■□□□□ 0.1
CTNS-202ENST00000381870 HIC1Q14526 733 aa15.68■□□□□ 0.1
CTNS-202ENST00000381870 MYLK3Q32MK0 819 aa15.68■□□□□ 0.1
CTNS-202ENST00000381870 RALGPS1Q5JS13 557 aa15.68■□□□□ 0.1
CTNS-202ENST00000381870 ANKRD22Q5VYY1 191 aa15.68■□□□□ 0.1
CTNS-202ENST00000381870 TMC7Q7Z402 723 aa15.68■□□□□ 0.1
CTNS-202ENST00000381870 RHOT1Q8IXI2 618 aa15.68■□□□□ 0.1
CTNS-202ENST00000381870 HSPBAP1Q96EW2 488 aa15.68■□□□□ 0.1
CTNS-202ENST00000381870 RBM38Q9H0Z9 239 aaKnown RBP15.68■□□□□ 0.1
CTNS-202ENST00000381870 CNTN3Q9P232 1028 aa15.68■□□□□ 0.1
CTNS-202ENST00000381870 TDRKHQ9Y2W6 561 aaKnown RBP15.68■□□□□ 0.1
CTNS-202ENST00000381870 MYH11P35749 1972 aa15.68■□□□□ 0.1
CTNS-202ENST00000381870 GOLGA8IPA6NC78 632 aa15.68■□□□□ 0.1
CTNS-202ENST00000381870 GOLGA8JA6NMD2 632 aa15.68■□□□□ 0.1
CTNS-202ENST00000381870 AP1G1O43747 822 aa15.68■□□□□ 0.1
CTNS-202ENST00000381870 ZNF189O75820 626 aaPredicted RBP15.68■□□□□ 0.1
CTNS-202ENST00000381870 PDE5AO76074 875 aa15.68■□□□□ 0.1
CTNS-202ENST00000381870 ATP6V1B1P15313 513 aa15.68■□□□□ 0.1
CTNS-202ENST00000381870 ATF7P17544 494 aaPredicted RBP15.68■□□□□ 0.1
CTNS-202ENST00000381870 PTP4A2Q12974 167 aa15.68■□□□□ 0.1
CTNS-202ENST00000381870 PICALMQ13492 652 aa15.68■□□□□ 0.1
CTNS-202ENST00000381870 TLR1Q15399 786 aa15.68■□□□□ 0.1
CTNS-202ENST00000381870 ZYXQ15942 572 aaKnown RBP15.68■□□□□ 0.1
CTNS-202ENST00000381870 PAOXQ6QHF9 649 aa15.68■□□□□ 0.1
CTNS-202ENST00000381870 KATNAL2Q8IYT4 538 aa15.68■□□□□ 0.1
CTNS-202ENST00000381870 HELQQ8TDG4 1101 aa15.68■□□□□ 0.1
CTNS-202ENST00000381870 JDP2Q8WYK2 163 aa15.68■□□□□ 0.1
CTNS-202ENST00000381870 IRGQQ8WZA9 623 aa15.68■□□□□ 0.1
CTNS-202ENST00000381870 ACAP3Q96P50 834 aa15.68■□□□□ 0.1
CTNS-202ENST00000381870 TMEM121Q9BTD3 319 aa15.68■□□□□ 0.1
CTNS-202ENST00000381870 ACSS3Q9H6R3 686 aa15.68■□□□□ 0.1
CTNS-202ENST00000381870 UBAP1Q9NZ09 502 aa15.68■□□□□ 0.1
CTNS-202ENST00000381870 WRAP73Q9P2S5 460 aaPredicted RBP15.68■□□□□ 0.1
CTNS-202ENST00000381870 SEL1LQ9UBV2 794 aa15.68■□□□□ 0.1
CTNS-202ENST00000381870 LZTS1Q9Y250 596 aa15.68■□□□□ 0.1
CTNS-202ENST00000381870 COL14A1Q05707 1796 aaKnown RBP15.67■□□□□ 0.1
CTNS-202ENST00000381870 MYOCOSA0A1B0GUC4 107 aa15.67■□□□□ 0.1
CTNS-202ENST00000381870 K7ENM7 598 aa15.67■□□□□ 0.1
CTNS-202ENST00000381870 C6orf222P0C671 652 aaPredicted RBP15.67■□□□□ 0.1
CTNS-202ENST00000381870 KRT5P13647 590 aa15.67■□□□□ 0.1
CTNS-202ENST00000381870 VARSP26640 1264 aaKnown RBP15.67■□□□□ 0.1
CTNS-202ENST00000381870 PHBP35232 272 aa15.67■□□□□ 0.1
CTNS-202ENST00000381870 EPHB1P54762 984 aa15.67■□□□□ 0.1
CTNS-202ENST00000381870 AQP5P55064 265 aa15.67■□□□□ 0.1
CTNS-202ENST00000381870 ALCAMQ13740 583 aa15.67■□□□□ 0.1
CTNS-202ENST00000381870 GPATCH4Q5T3I0 446 aaKnown RBP15.67■□□□□ 0.1
CTNS-202ENST00000381870 RHPN2Q8IUC4 686 aa15.67■□□□□ 0.1
CTNS-202ENST00000381870 OGFOD1Q8N543 542 aa15.67■□□□□ 0.1
CTNS-202ENST00000381870 ATP11CQ8NB49 1132 aa15.67■□□□□ 0.1
CTNS-202ENST00000381870 CCDC124Q96CT7 223 aaKnown RBP15.67■□□□□ 0.1
CTNS-202ENST00000381870 APOPT1Q96IL0 206 aa15.67■□□□□ 0.1
CTNS-202ENST00000381870 QTRT2Q9H974 415 aaKnown RBP15.67■□□□□ 0.1
CTNS-202ENST00000381870 BTBD7Q9P203 1132 aa15.67■□□□□ 0.1
CTNS-202ENST00000381870 ZNF652Q9Y2D9 606 aa15.67■□□□□ 0.1
CTNS-202ENST00000381870 PLIN4Q96Q06 1357 aa15.67■□□□□ 0.1
CTNS-202ENST00000381870 CCDC195A0A1B0GUA6 201 aa15.67■□□□□ 0.1
CTNS-202ENST00000381870 CAPN8A6NHC0 703 aa15.67■□□□□ 0.1
CTNS-202ENST00000381870 PSTPIP1O43586 416 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms