RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 LMO2P25791 158 aa15.18■□□□□ 0.02
SHOX-202ENST00000381575 AVPR1AP37288 418 aa15.18■□□□□ 0.02
SHOX-202ENST00000381575 AFMP43652 599 aa15.18■□□□□ 0.02
SHOX-202ENST00000381575 SPATA2LQ8IUW3 424 aaPredicted RBP15.18■□□□□ 0.02
SHOX-202ENST00000381575 TOP6BLQ8N6T0 577 aa15.18■□□□□ 0.02
SHOX-202ENST00000381575 CELF5Q8N6W0 485 aaKnown RBP15.18■□□□□ 0.02
SHOX-202ENST00000381575 IQUBQ8NA54 791 aa15.18■□□□□ 0.02
SHOX-202ENST00000381575 LEO1Q8WVC0 666 aaPredicted RBP15.18■□□□□ 0.02
SHOX-202ENST00000381575 KBTBD7Q8WVZ9 684 aa15.18■□□□□ 0.02
SHOX-202ENST00000381575 SNX21Q969T3 373 aa15.18■□□□□ 0.02
SHOX-202ENST00000381575 CUEDC2Q9H467 287 aa15.18■□□□□ 0.02
SHOX-202ENST00000381575 TRPC7Q9HCX4 862 aa15.18■□□□□ 0.02
SHOX-202ENST00000381575 AGPAT3Q9NRZ7 376 aa15.18■□□□□ 0.02
SHOX-202ENST00000381575 GKN1Q9NS71 199 aa15.18■□□□□ 0.02
SHOX-202ENST00000381575 OBP2AQ9NY56 170 aa15.18■□□□□ 0.02
SHOX-202ENST00000381575 PCDHA7Q9UN72 937 aa15.18■□□□□ 0.02
SHOX-202ENST00000381575 R3HCC1Q9Y3T6 440 aaKnown RBP15.18■□□□□ 0.02
SHOX-202ENST00000381575 OTOL1A6NHN0 477 aaPredicted RBP15.17■□□□□ 0.02
SHOX-202ENST00000381575 GABRDO14764 452 aa15.17■□□□□ 0.02
SHOX-202ENST00000381575 EIF3DO15371 548 aaKnown RBP eCLIP15.17■□□□□ 0.02
SHOX-202ENST00000381575 PDGFRBP09619 1106 aa15.17■□□□□ 0.02
SHOX-202ENST00000381575 CSH1P0DML2 217 aa15.17■□□□□ 0.02
SHOX-202ENST00000381575 CSH2P0DML3 217 aa15.17■□□□□ 0.02
SHOX-202ENST00000381575 ARSAP15289 507 aa15.17■□□□□ 0.02
SHOX-202ENST00000381575 ME1P48163 572 aa15.17■□□□□ 0.02
SHOX-202ENST00000381575 CCR3P51677 355 aa15.17■□□□□ 0.02
SHOX-202ENST00000381575 AMPD3Q01432 767 aa15.17■□□□□ 0.02
SHOX-202ENST00000381575 MYO1EQ12965 1108 aa15.17■□□□□ 0.02
SHOX-202ENST00000381575 SRSF5Q13243 272 aaKnown RBP15.17■□□□□ 0.02
SHOX-202ENST00000381575 CUL4BQ13620 913 aa15.17■□□□□ 0.02
SHOX-202ENST00000381575 SNRNP35Q16560 246 aaKnown RBP15.17■□□□□ 0.02
SHOX-202ENST00000381575 NAIF1Q69YI7 327 aaPredicted RBP15.17■□□□□ 0.02
SHOX-202ENST00000381575 HEATR6Q6AI08 1181 aaKnown RBP15.17■□□□□ 0.02
SHOX-202ENST00000381575 RALGPS2Q86X27 583 aaPredicted RBP15.17■□□□□ 0.02
SHOX-202ENST00000381575 ZNF507Q8TCN5 953 aa15.17■□□□□ 0.02
SHOX-202ENST00000381575 SCFD1Q8WVM8 642 aa15.17■□□□□ 0.02
SHOX-202ENST00000381575 MRPS31Q92665 395 aaKnown RBP15.17■□□□□ 0.02
SHOX-202ENST00000381575 MYLPFQ96A32 169 aa15.17■□□□□ 0.02
SHOX-202ENST00000381575 CCDC127Q96BQ5 260 aa15.17■□□□□ 0.02
SHOX-202ENST00000381575 CHAMP1Q96JM3 812 aa15.17■□□□□ 0.02
SHOX-202ENST00000381575 SLC22A12Q96S37 553 aa15.17■□□□□ 0.02
SHOX-202ENST00000381575 C7orf25Q9BPX7 421 aa15.17■□□□□ 0.02
SHOX-202ENST00000381575 SYT15Q9BQS2 421 aa15.17■□□□□ 0.02
SHOX-202ENST00000381575 LRRC27Q9C0I9 530 aa15.17■□□□□ 0.02
SHOX-202ENST00000381575 EPC1Q9H2F5 836 aa15.17■□□□□ 0.02
SHOX-202ENST00000381575 EBF3Q9H4W6 596 aa15.17■□□□□ 0.02
SHOX-202ENST00000381575 SLC39A2Q9NP94 309 aa15.17■□□□□ 0.02
SHOX-202ENST00000381575 CRTAC1Q9NQ79 661 aa15.17■□□□□ 0.02
SHOX-202ENST00000381575 HPS4Q9NQG7 708 aa15.17■□□□□ 0.02
SHOX-202ENST00000381575 KIAA1549LQ6ZVL6 1849 aa15.17■□□□□ 0.02
SHOX-202ENST00000381575 CHURC1-FNTBB4DL54 471 aa15.16■□□□□ 0.02
SHOX-202ENST00000381575 KIAA0391O15091 583 aaKnown RBP15.16■□□□□ 0.02
SHOX-202ENST00000381575 PCSK1P29120 753 aa15.16■□□□□ 0.02
SHOX-202ENST00000381575 CXCL12P48061 93 aa15.16■□□□□ 0.02
SHOX-202ENST00000381575 LHX1P48742 406 aa15.16■□□□□ 0.02
SHOX-202ENST00000381575 FNTBP49356 437 aa15.16■□□□□ 0.02
SHOX-202ENST00000381575 RPL10AP62906 217 aaKnown RBP15.16■□□□□ 0.02
SHOX-202ENST00000381575 DNM1Q05193 864 aaKnown RBP15.16■□□□□ 0.02
SHOX-202ENST00000381575 CYP24A1Q07973 514 aa15.16■□□□□ 0.02
SHOX-202ENST00000381575 LRRC32Q14392 662 aa15.16■□□□□ 0.02
SHOX-202ENST00000381575 DUOXA2Q1HG44 320 aa15.16■□□□□ 0.02
SHOX-202ENST00000381575 ITPRIPL2Q3MIP1 535 aa15.16■□□□□ 0.02
SHOX-202ENST00000381575 PKN3Q6P5Z2 889 aa15.16■□□□□ 0.02
SHOX-202ENST00000381575 UNC13DQ70J99 1090 aa15.16■□□□□ 0.02
SHOX-202ENST00000381575 TRAPPC11Q7Z392 1133 aa15.16■□□□□ 0.02
SHOX-202ENST00000381575 WDR49Q8IV35 697 aa15.16■□□□□ 0.02
SHOX-202ENST00000381575 ELMO3Q96BJ8 720 aa15.16■□□□□ 0.02
SHOX-202ENST00000381575 CHFRQ96EP1 664 aa15.16■□□□□ 0.02
SHOX-202ENST00000381575 CYP2S1Q96SQ9 504 aa15.16■□□□□ 0.02
SHOX-202ENST00000381575 MMS19Q96T76 1030 aa15.16■□□□□ 0.02
SHOX-202ENST00000381575 MRPL45Q9BRJ2 306 aaKnown RBP15.16■□□□□ 0.02
SHOX-202ENST00000381575 ABCB6Q9NP58 842 aa15.16■□□□□ 0.02
SHOX-202ENST00000381575 THG1LQ9NWX6 298 aaKnown RBP15.16■□□□□ 0.02
SHOX-202ENST00000381575 NME7Q9Y5B8 376 aa15.16■□□□□ 0.02
SHOX-202ENST00000381575 LAMA1P25391 3075 aa15.16■□□□□ 0.02
SHOX-202ENST00000381575 CNOT1A5YKK6 2376 aaKnown RBP15.16■□□□□ 0.02
SHOX-202ENST00000381575 NOL4O94818 638 aa15.15■□□□□ 0.02
SHOX-202ENST00000381575 CST3P01034 146 aaPredicted RBP15.15■□□□□ 0.02
SHOX-202ENST00000381575 TNNI1P19237 187 aa15.15■□□□□ 0.02
SHOX-202ENST00000381575 BDNFP23560 247 aa15.15■□□□□ 0.02
SHOX-202ENST00000381575 WEE1P30291 646 aa15.15■□□□□ 0.02
SHOX-202ENST00000381575 CASP4P49662 377 aa15.15■□□□□ 0.02
SHOX-202ENST00000381575 MLLT6P55198 1093 aaPredicted RBP15.15■□□□□ 0.02
SHOX-202ENST00000381575 PLCB2Q00722 1185 aa15.15■□□□□ 0.02
SHOX-202ENST00000381575 CYP27A1Q02318 531 aa15.15■□□□□ 0.02
SHOX-202ENST00000381575 EHHADHQ08426 723 aa15.15■□□□□ 0.02
SHOX-202ENST00000381575 CCINQ13939 588 aa15.15■□□□□ 0.02
SHOX-202ENST00000381575 RESP18Q5W5W9 173 aa15.15■□□□□ 0.02
SHOX-202ENST00000381575 CNNM4Q6P4Q7 775 aa15.15■□□□□ 0.02
SHOX-202ENST00000381575 PRR23BQ6ZRT6 265 aa15.15■□□□□ 0.02
SHOX-202ENST00000381575 MON1AQ86VX9 555 aa15.15■□□□□ 0.02
SHOX-202ENST00000381575 SPEM1Q8N4L4 309 aa15.15■□□□□ 0.02
SHOX-202ENST00000381575 MSANTD3Q96H12 275 aa15.15■□□□□ 0.02
SHOX-202ENST00000381575 CGRRF1Q99675 332 aa15.15■□□□□ 0.02
SHOX-202ENST00000381575 FAM83CQ9BQN1 747 aa15.15■□□□□ 0.02
SHOX-202ENST00000381575 GZF1Q9H116 711 aaPredicted RBP15.15■□□□□ 0.02
SHOX-202ENST00000381575 TDP1Q9NUW8 608 aa15.15■□□□□ 0.02
SHOX-202ENST00000381575 POLR3BQ9NW08 1133 aaPredicted RBP15.15■□□□□ 0.02
SHOX-202ENST00000381575 TPRP12270 2363 aaKnown RBP15.15■□□□□ 0.02
SHOX-202ENST00000381575 C2orf78A6NCI8 922 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms