RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 PRPF39Q86UA1 669 aaKnown RBP17.88■□□□□ 0.45
SGCB-201ENST00000381431 ABRAQ8N0Z2 381 aa17.88■□□□□ 0.45
SGCB-201ENST00000381431 EXD1Q8NHP7 514 aa17.88■□□□□ 0.45
SGCB-201ENST00000381431 SPATA20Q8TB22 786 aa17.88■□□□□ 0.45
SGCB-201ENST00000381431 DDX20Q9UHI6 824 aaKnown RBP17.88■□□□□ 0.45
SGCB-201ENST00000381431 HNRNPCL1O60812 293 aaKnown RBP17.88■□□□□ 0.45
SGCB-201ENST00000381431 NUMBP49757 651 aa17.88■□□□□ 0.45
SGCB-201ENST00000381431 SPOCD1Q6ZMY3 1216 aa17.88■□□□□ 0.45
SGCB-201ENST00000381431 FAM131BQ86XD5 332 aa17.88■□□□□ 0.45
SGCB-201ENST00000381431 GIPC2Q8TF65 315 aa17.88■□□□□ 0.45
SGCB-201ENST00000381431 BAP1Q92560 729 aa17.88■□□□□ 0.45
SGCB-201ENST00000381431 CGRRF1Q99675 332 aa17.88■□□□□ 0.45
SGCB-201ENST00000381431 MEIS2O14770 477 aa17.87■□□□□ 0.45
SGCB-201ENST00000381431 SLC25A27O95847 323 aa17.87■□□□□ 0.45
SGCB-201ENST00000381431 PTGER2P43116 358 aa17.87■□□□□ 0.45
SGCB-201ENST00000381431 PGM5Q15124 567 aa17.87■□□□□ 0.45
SGCB-201ENST00000381431 FBXO16Q8IX29 292 aaPredicted RBP17.87■□□□□ 0.45
SGCB-201ENST00000381431 DPP3Q9NY33 737 aa17.87■□□□□ 0.45
SGCB-201ENST00000381431 ACO1P21399 889 aaKnown RBP17.87■□□□□ 0.45
SGCB-201ENST00000381431 HADHAP40939 763 aa17.87■□□□□ 0.45
SGCB-201ENST00000381431 DACT2Q5SW24 774 aa17.87■□□□□ 0.45
SGCB-201ENST00000381431 CERS5Q8N5B7 392 aa17.87■□□□□ 0.45
SGCB-201ENST00000381431 ZSWIM2Q8NEG5 633 aa17.87■□□□□ 0.45
SGCB-201ENST00000381431 DNAJC9Q8WXX5 260 aa17.87■□□□□ 0.45
SGCB-201ENST00000381431 NSL1Q96IY1 281 aa17.87■□□□□ 0.45
SGCB-201ENST00000381431 OLA1Q9NTK5 396 aaKnown RBP17.87■□□□□ 0.45
SGCB-201ENST00000381431 VTNP04004 478 aa17.87■□□□□ 0.45
SGCB-201ENST00000381431 TTC39BQ5VTQ0 682 aaPredicted RBP17.87■□□□□ 0.45
SGCB-201ENST00000381431 PAFAH2Q99487 392 aa17.87■□□□□ 0.45
SGCB-201ENST00000381431 APOL2Q9BQE5 337 aa17.87■□□□□ 0.45
SGCB-201ENST00000381431 DDIT4Q9NX09 232 aa17.87■□□□□ 0.45
SGCB-201ENST00000381431 AFF4Q9UHB7 1163 aaKnown RBP17.87■□□□□ 0.45
SGCB-201ENST00000381431 M0QYT0 321 aa17.86■□□□□ 0.45
SGCB-201ENST00000381431 RIPK2O43353 540 aa17.86■□□□□ 0.45
SGCB-201ENST00000381431 ADCY3O60266 1144 aa17.86■□□□□ 0.45
SGCB-201ENST00000381431 CD4P01730 458 aa17.86■□□□□ 0.45
SGCB-201ENST00000381431 SETSIPP0DME0 302 aa17.86■□□□□ 0.45
SGCB-201ENST00000381431 CXCL8P10145 99 aa17.86■□□□□ 0.45
SGCB-201ENST00000381431 CAPRIN1Q14444 709 aaKnown RBP17.86■□□□□ 0.45
SGCB-201ENST00000381431 IMPG1Q17R60 797 aa17.86■□□□□ 0.45
SGCB-201ENST00000381431 DNAL1Q4LDG9 190 aa17.86■□□□□ 0.45
SGCB-201ENST00000381431 RARS2Q5T160 578 aaKnown RBP17.86■□□□□ 0.45
SGCB-201ENST00000381431 SPATA2LQ8IUW3 424 aaPredicted RBP17.86■□□□□ 0.45
SGCB-201ENST00000381431 TMEM139Q8IV31 216 aa17.86■□□□□ 0.45
SGCB-201ENST00000381431 ATPAF2Q8N5M1 289 aa17.86■□□□□ 0.45
SGCB-201ENST00000381431 SLC25A41Q8N5S1 370 aa17.86■□□□□ 0.45
SGCB-201ENST00000381431 CXorf56Q9H5V9 222 aa17.86■□□□□ 0.45
SGCB-201ENST00000381431 CHST7Q9NS84 486 aa17.86■□□□□ 0.45
SGCB-201ENST00000381431 TJP2Q9UDY2 1190 aa17.86■□□□□ 0.45
SGCB-201ENST00000381431 RASSF10A6NK89 507 aa17.86■□□□□ 0.45
SGCB-201ENST00000381431 VIL1P09327 827 aaKnown RBP17.86■□□□□ 0.45
SGCB-201ENST00000381431 IL31Q6EBC2 164 aa17.86■□□□□ 0.45
SGCB-201ENST00000381431 C1orf186Q6ZWK4 172 aa17.86■□□□□ 0.45
SGCB-201ENST00000381431 RXFP2Q8WXD0 754 aa17.86■□□□□ 0.45
SGCB-201ENST00000381431 IKZF4Q9H2S9 585 aa17.86■□□□□ 0.45
SGCB-201ENST00000381431 NDFIP2Q9NV92 336 aa17.86■□□□□ 0.45
SGCB-201ENST00000381431 FRMPD4Q14CM0 1322 aa17.86■□□□□ 0.45
SGCB-201ENST00000381431 ANKRD63C9JTQ0 380 aa17.86■□□□□ 0.45
SGCB-201ENST00000381431 SMAPO00193 183 aa17.86■□□□□ 0.45
SGCB-201ENST00000381431 KCNA2P16389 499 aa17.86■□□□□ 0.45
SGCB-201ENST00000381431 MPZL3Q6UWV2 235 aa17.86■□□□□ 0.45
SGCB-201ENST00000381431 MFSD7Q6UXD7 560 aa17.86■□□□□ 0.45
SGCB-201ENST00000381431 IDI2Q9BXS1 227 aa17.86■□□□□ 0.45
SGCB-201ENST00000381431 PMPCBO75439 489 aa17.86■□□□□ 0.45
SGCB-201ENST00000381431 TAF1CQ15572 869 aaPredicted RBP17.86■□□□□ 0.45
SGCB-201ENST00000381431 CNGA3Q16281 694 aa17.86■□□□□ 0.45
SGCB-201ENST00000381431 EFHC1Q5JVL4 640 aa17.86■□□□□ 0.45
SGCB-201ENST00000381431 FAM172AQ8WUF8 416 aa17.86■□□□□ 0.45
SGCB-201ENST00000381431 CCDC90BQ9GZT6 254 aa17.86■□□□□ 0.45
SGCB-201ENST00000381431 SHPRHQ149N8 1683 aa17.85■□□□□ 0.45
SGCB-201ENST00000381431 NQO1P15559 274 aaKnown RBP17.85■□□□□ 0.45
SGCB-201ENST00000381431 SERPINB4P48594 390 aa17.85■□□□□ 0.45
SGCB-201ENST00000381431 CDH8P55286 799 aa17.85■□□□□ 0.45
SGCB-201ENST00000381431 MED21Q13503 144 aa17.85■□□□□ 0.45
SGCB-201ENST00000381431 UGP2Q16851 508 aa17.85■□□□□ 0.45
SGCB-201ENST00000381431 LAYNQ6UX15 382 aa17.85■□□□□ 0.45
SGCB-201ENST00000381431 TRIM15Q9C019 465 aa17.85■□□□□ 0.45
SGCB-201ENST00000381431 KCNMB3Q9NPA1 279 aa17.85■□□□□ 0.45
SGCB-201ENST00000381431 USP18Q9UMW8 372 aa17.85■□□□□ 0.45
SGCB-201ENST00000381431 STAG3L1P0CL83 205 aa17.85■□□□□ 0.45
SGCB-201ENST00000381431 EEF1DP29692 281 aaKnown RBP17.85■□□□□ 0.45
SGCB-201ENST00000381431 SSTR1P30872 391 aa17.85■□□□□ 0.45
SGCB-201ENST00000381431 AARSP49588 968 aaKnown RBP eCLIP17.85■□□□□ 0.45
SGCB-201ENST00000381431 PTPN11Q06124 597 aaPredicted RBP17.85■□□□□ 0.45
SGCB-201ENST00000381431 SNAPC2Q13487 334 aa17.85■□□□□ 0.45
SGCB-201ENST00000381431 BMPR2Q13873 1038 aa17.85■□□□□ 0.45
SGCB-201ENST00000381431 DENND5BQ6ZUT9 1274 aa17.85■□□□□ 0.45
SGCB-201ENST00000381431 KIRREL3Q8IZU9 778 aa17.85■□□□□ 0.45
SGCB-201ENST00000381431 PPHLN1Q8NEY8 458 aaKnown RBP17.85■□□□□ 0.45
SGCB-201ENST00000381431 DNAJC18Q9H819 358 aa17.85■□□□□ 0.45
SGCB-201ENST00000381431 GDF3Q9NR23 364 aa17.85■□□□□ 0.45
SGCB-201ENST00000381431 ARHGEF38Q9NXL2 777 aa17.85■□□□□ 0.45
SGCB-201ENST00000381431 A0A087WZ62 844 aa17.85■□□□□ 0.45
SGCB-201ENST00000381431 SEC24DO94855 1032 aaPredicted RBP17.85■□□□□ 0.45
SGCB-201ENST00000381431 ANP32DO95626 131 aa17.85■□□□□ 0.45
SGCB-201ENST00000381431 RECQLP46063 649 aaPredicted RBP17.85■□□□□ 0.45
SGCB-201ENST00000381431 LRRC23Q53EV4 343 aaPredicted RBP17.85■□□□□ 0.45
SGCB-201ENST00000381431 NRBF2Q96F24 287 aa17.85■□□□□ 0.45
SGCB-201ENST00000381431 ASIC4Q96FT7 647 aa17.85■□□□□ 0.45
SGCB-201ENST00000381431 ELMO2Q96JJ3 720 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms