RNA–Protein interactions for RNA: ENST00000381323.7

FAM49A-201, Transcript of family with sequence similarity 49 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49A, Length 4,670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-201ENST00000381323 LOXHD1Q8IVV2 1947 aa8.35□□□□□ -1.07
FAM49A-201ENST00000381323 CHADO15335 359 aa8.35□□□□□ -1.07
FAM49A-201ENST00000381323 PI15O43692 258 aa8.35□□□□□ -1.07
FAM49A-201ENST00000381323 YWHAQP27348 245 aa8.35□□□□□ -1.07
FAM49A-201ENST00000381323 KCNA1Q09470 495 aa8.35□□□□□ -1.07
FAM49A-201ENST00000381323 ADAM9Q13443 819 aa8.35□□□□□ -1.07
FAM49A-201ENST00000381323 KMT5BQ4FZB7 885 aa8.35□□□□□ -1.07
FAM49A-201ENST00000381323 VSTM1Q6UX27 236 aa8.35□□□□□ -1.07
FAM49A-201ENST00000381323 DDX42Q86XP3 938 aaKnown RBP eCLIP8.35□□□□□ -1.07
FAM49A-201ENST00000381323 FAM186BQ8IYM0 893 aa8.35□□□□□ -1.07
FAM49A-201ENST00000381323 PDCL2Q8N4E4 241 aa8.35□□□□□ -1.07
FAM49A-201ENST00000381323 SHKBP1Q8TBC3 707 aa8.35□□□□□ -1.07
FAM49A-201ENST00000381323 ASB16Q96NS5 453 aa8.35□□□□□ -1.07
FAM49A-201ENST00000381323 CGRRF1Q99675 332 aa8.35□□□□□ -1.07
FAM49A-201ENST00000381323 STRIP2Q9ULQ0 834 aa8.35□□□□□ -1.07
FAM49A-201ENST00000381323 RTN3O95197 1032 aaPredicted RBP8.35□□□□□ -1.07
FAM49A-201ENST00000381323 FGFR1OPO95684 399 aaKnown RBP8.35□□□□□ -1.07
FAM49A-201ENST00000381323 HAPLN1P10915 354 aaPredicted RBP8.35□□□□□ -1.07
FAM49A-201ENST00000381323 RALAP11233 206 aa8.35□□□□□ -1.07
FAM49A-201ENST00000381323 PON2Q15165 354 aa8.35□□□□□ -1.07
FAM49A-201ENST00000381323 TXNDC8Q6A555 127 aa8.35□□□□□ -1.07
FAM49A-201ENST00000381323 MYLPFQ96A32 169 aa8.35□□□□□ -1.07
FAM49A-201ENST00000381323 EBF3Q9H4W6 596 aa8.35□□□□□ -1.07
FAM49A-201ENST00000381323 TBC1D3BA6NDS4 549 aa8.35□□□□□ -1.07
FAM49A-201ENST00000381323 RPN1P04843 607 aaKnown RBP8.35□□□□□ -1.07
FAM49A-201ENST00000381323 MYL1P05976 194 aa8.35□□□□□ -1.07
FAM49A-201ENST00000381323 PFKFB1P16118 471 aa8.35□□□□□ -1.07
FAM49A-201ENST00000381323 PSMC2P35998 433 aaKnown RBP8.35□□□□□ -1.07
FAM49A-201ENST00000381323 DGKEP52429 567 aa8.35□□□□□ -1.07
FAM49A-201ENST00000381323 SGSM1Q2NKQ1 1148 aa8.35□□□□□ -1.07
FAM49A-201ENST00000381323 AASDHQ4L235 1098 aaPredicted RBP8.35□□□□□ -1.07
FAM49A-201ENST00000381323 ALKAL1Q6UXT8 129 aa8.35□□□□□ -1.07
FAM49A-201ENST00000381323 RALGPS2Q86X27 583 aaPredicted RBP8.35□□□□□ -1.07
FAM49A-201ENST00000381323 GPR161Q8N6U8 529 aaKnown RBP8.35□□□□□ -1.07
FAM49A-201ENST00000381323 LEO1Q8WVC0 666 aaPredicted RBP8.35□□□□□ -1.07
FAM49A-201ENST00000381323 ATP2A3Q93084 1043 aa8.35□□□□□ -1.07
FAM49A-201ENST00000381323 ASIC4Q96FT7 647 aa8.35□□□□□ -1.07
FAM49A-201ENST00000381323 HEXIM2Q96MH2 286 aaKnown RBP8.35□□□□□ -1.07
FAM49A-201ENST00000381323 TMEM209Q96SK2 561 aa8.35□□□□□ -1.07
FAM49A-201ENST00000381323 LRRC4Q9HBW1 653 aa8.35□□□□□ -1.07
FAM49A-201ENST00000381323 L1RE1Q9UN81 338 aa8.35□□□□□ -1.07
FAM49A-201ENST00000381323 KRBA1A5PL33 1030 aa8.35□□□□□ -1.07
FAM49A-201ENST00000381323 AP1G2O75843 785 aa8.35□□□□□ -1.07
FAM49A-201ENST00000381323 NR3C1P04150 777 aa8.35□□□□□ -1.07
FAM49A-201ENST00000381323 CYBBP04839 570 aa8.35□□□□□ -1.07
FAM49A-201ENST00000381323 ATICP31939 592 aa8.35□□□□□ -1.07
FAM49A-201ENST00000381323 SLC5A9Q2M3M2 681 aa8.35□□□□□ -1.07
FAM49A-201ENST00000381323 XKR4Q5GH76 650 aa8.35□□□□□ -1.07
FAM49A-201ENST00000381323 GRAMD1CQ8IYS0 662 aa8.35□□□□□ -1.07
FAM49A-201ENST00000381323 RNF168Q8IYW5 571 aaPredicted RBP8.35□□□□□ -1.07
FAM49A-201ENST00000381323 PDZD8Q8NEN9 1154 aa8.35□□□□□ -1.07
FAM49A-201ENST00000381323 TSTD1Q8NFU3 115 aa8.35□□□□□ -1.07
FAM49A-201ENST00000381323 RNF139Q8WU17 664 aa8.35□□□□□ -1.07
FAM49A-201ENST00000381323 FUBP3Q96I24 572 aaKnown RBP eCLIP8.35□□□□□ -1.07
FAM49A-201ENST00000381323 SMG9Q9H0W8 520 aaKnown RBP8.35□□□□□ -1.07
FAM49A-201ENST00000381323 GDPD2Q9HCC8 539 aa8.35□□□□□ -1.07
FAM49A-201ENST00000381323 ZNF334Q9HCZ1 680 aaPredicted RBP8.35□□□□□ -1.07
FAM49A-201ENST00000381323 ZSCAN32Q9NX65 697 aa8.35□□□□□ -1.07
FAM49A-201ENST00000381323 CEP83Q9Y592 693 aa8.35□□□□□ -1.07
FAM49A-201ENST00000381323 TYW5A2RUC4 315 aaKnown RBP8.34□□□□□ -1.07
FAM49A-201ENST00000381323 PIRO00625 290 aa8.34□□□□□ -1.07
FAM49A-201ENST00000381323 N4BP1O75113 896 aaKnown RBP8.34□□□□□ -1.07
FAM49A-201ENST00000381323 USP8P40818 1118 aa8.34□□□□□ -1.07
FAM49A-201ENST00000381323 CUL4BQ13620 913 aa8.34□□□□□ -1.07
FAM49A-201ENST00000381323 INTS8Q75QN2 995 aaKnown RBP8.34□□□□□ -1.07
FAM49A-201ENST00000381323 CMTM8Q8IZV2 173 aa8.34□□□□□ -1.07
FAM49A-201ENST00000381323 ARL14EPQ8N8R7 260 aaPredicted RBP8.34□□□□□ -1.07
FAM49A-201ENST00000381323 C1orf127Q8N9H9 656 aa8.34□□□□□ -1.07
FAM49A-201ENST00000381323 SCFD1Q8WVM8 642 aa8.34□□□□□ -1.07
FAM49A-201ENST00000381323 C7orf25Q9BPX7 421 aa8.34□□□□□ -1.07
FAM49A-201ENST00000381323 ZCWPW1Q9H0M4 648 aa8.34□□□□□ -1.07
FAM49A-201ENST00000381323 SPTBN2O15020 2390 aa8.34□□□□□ -1.07
FAM49A-201ENST00000381323 F8VP50 259 aa8.34□□□□□ -1.07
FAM49A-201ENST00000381323 ADH1CP00326 375 aa8.34□□□□□ -1.07
FAM49A-201ENST00000381323 CMA1P23946 247 aa8.34□□□□□ -1.07
FAM49A-201ENST00000381323 CASP1P29466 404 aa8.34□□□□□ -1.07
FAM49A-201ENST00000381323 HOXD11P31277 338 aaPredicted RBP8.34□□□□□ -1.07
FAM49A-201ENST00000381323 RDXP35241 583 aaKnown RBP8.34□□□□□ -1.07
FAM49A-201ENST00000381323 FAM160A1Q05DH4 1040 aa8.34□□□□□ -1.07
FAM49A-201ENST00000381323 RUNX3Q13761 415 aa8.34□□□□□ -1.07
FAM49A-201ENST00000381323 MTF1Q14872 753 aa8.34□□□□□ -1.07
FAM49A-201ENST00000381323 SASS6Q6UVJ0 657 aa8.34□□□□□ -1.07
FAM49A-201ENST00000381323 EFCAB13Q8IY85 973 aa8.34□□□□□ -1.07
FAM49A-201ENST00000381323 GTSE1Q9NYZ3 720 aa8.34□□□□□ -1.07
FAM49A-201ENST00000381323 SPECC1L-ADORA2AF8WAN1 911 aa8.34□□□□□ -1.07
FAM49A-201ENST00000381323 LRRN2O75325 713 aa8.34□□□□□ -1.07
FAM49A-201ENST00000381323 APODP05090 189 aa8.34□□□□□ -1.07
FAM49A-201ENST00000381323 POU2F2P09086 479 aa8.34□□□□□ -1.07
FAM49A-201ENST00000381323 FAM200BP0CF97 657 aa8.34□□□□□ -1.07
FAM49A-201ENST00000381323 CCDC70Q6NSX1 233 aa8.34□□□□□ -1.07
FAM49A-201ENST00000381323 TSSK4Q6SA08 328 aa8.34□□□□□ -1.07
FAM49A-201ENST00000381323 FAM126AQ9BYI3 521 aaPredicted RBP8.34□□□□□ -1.07
FAM49A-201ENST00000381323 PTPN1P18031 435 aaKnown RBP8.33□□□□□ -1.08
FAM49A-201ENST00000381323 TARSP26639 723 aaKnown RBP8.33□□□□□ -1.08
FAM49A-201ENST00000381323 CYP24A1Q07973 514 aa8.33□□□□□ -1.08
FAM49A-201ENST00000381323 DGLUCYQ7Z3D6 616 aa8.33□□□□□ -1.08
FAM49A-201ENST00000381323 TTC39CQ8N584 583 aa8.33□□□□□ -1.08
FAM49A-201ENST00000381323 OR10T2Q8NGX3 314 aa8.33□□□□□ -1.08
FAM49A-201ENST00000381323 SH3RF2Q8TEC5 729 aa8.33□□□□□ -1.08
FAM49A-201ENST00000381323 XPO6Q96QU8 1125 aaKnown RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms