RNA–Protein interactions for RNA: ENST00000381118.7

ERCC8-202, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 2,236 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-202ENST00000381118 FAM117BQ6P1L5 589 aa8.46□□□□□ -1.06
ERCC8-202ENST00000381118 DNAJC24Q6P3W2 148 aa8.46□□□□□ -1.06
ERCC8-202ENST00000381118 DCUN1D2Q6PH85 259 aa8.46□□□□□ -1.06
ERCC8-202ENST00000381118 CD300LGQ6UXG3 332 aa8.46□□□□□ -1.06
ERCC8-202ENST00000381118 LIMS2Q7Z4I7 341 aa8.46□□□□□ -1.06
ERCC8-202ENST00000381118 COLGALT2Q8IYK4 626 aa8.46□□□□□ -1.06
ERCC8-202ENST00000381118 CRYBG2Q8N1P7 616 aa8.46□□□□□ -1.06
ERCC8-202ENST00000381118 RSPH1Q8WYR4 309 aa8.46□□□□□ -1.06
ERCC8-202ENST00000381118 TRIM43Q96BQ3 446 aaPredicted RBP8.46□□□□□ -1.06
ERCC8-202ENST00000381118 UROC1Q96N76 676 aa8.46□□□□□ -1.06
ERCC8-202ENST00000381118 CASD1Q96PB1 797 aa8.46□□□□□ -1.06
ERCC8-202ENST00000381118 SELENOOQ9BVL4 669 aa8.46□□□□□ -1.06
ERCC8-202ENST00000381118 ELAC1Q9H777 363 aaKnown RBP8.46□□□□□ -1.06
ERCC8-202ENST00000381118 MRPL47Q9HD33 250 aaKnown RBP8.46□□□□□ -1.06
ERCC8-202ENST00000381118 AVENQ9NQS1 362 aaPredicted RBP8.46□□□□□ -1.06
ERCC8-202ENST00000381118 PARVAQ9NVD7 372 aa8.46□□□□□ -1.06
ERCC8-202ENST00000381118 KANSL3Q9P2N6 904 aa8.46□□□□□ -1.06
ERCC8-202ENST00000381118 SCINQ9Y6U3 715 aa8.46□□□□□ -1.06
ERCC8-202ENST00000381118 PDE2AO00408 941 aaPredicted RBP8.45□□□□□ -1.06
ERCC8-202ENST00000381118 INPPL1O15357 1258 aa8.45□□□□□ -1.06
ERCC8-202ENST00000381118 MTA2O94776 668 aa8.45□□□□□ -1.06
ERCC8-202ENST00000381118 PARNO95453 639 aaKnown RBP8.45□□□□□ -1.06
ERCC8-202ENST00000381118 ACRP10323 421 aa8.45□□□□□ -1.06
ERCC8-202ENST00000381118 PTPN1P18031 435 aaKnown RBP8.45□□□□□ -1.06
ERCC8-202ENST00000381118 LHX1P48742 406 aa8.45□□□□□ -1.06
ERCC8-202ENST00000381118 MARCKSL1P49006 195 aa8.45□□□□□ -1.06
ERCC8-202ENST00000381118 AARSP49588 968 aaKnown RBP eCLIP8.45□□□□□ -1.06
ERCC8-202ENST00000381118 DSC1Q08554 894 aa8.45□□□□□ -1.06
ERCC8-202ENST00000381118 STILQ15468 1287 aa8.45□□□□□ -1.06
ERCC8-202ENST00000381118 WHAMMP3Q1A5X7 153 aa8.45□□□□□ -1.06
ERCC8-202ENST00000381118 C11orf63Q6NUN7 778 aa8.45□□□□□ -1.06
ERCC8-202ENST00000381118 PMF1Q6P1K2 205 aa8.45□□□□□ -1.06
ERCC8-202ENST00000381118 DCLRE1AQ6PJP8 1040 aa8.45□□□□□ -1.06
ERCC8-202ENST00000381118 XYLT1Q86Y38 959 aa8.45□□□□□ -1.06
ERCC8-202ENST00000381118 CREG2Q8IUH2 290 aa8.45□□□□□ -1.06
ERCC8-202ENST00000381118 NPAS4Q8IUM7 802 aa8.45□□□□□ -1.06
ERCC8-202ENST00000381118 TMEM86AQ8N2M4 240 aa8.45□□□□□ -1.06
ERCC8-202ENST00000381118 CEP112Q8N8E3 955 aa8.45□□□□□ -1.06
ERCC8-202ENST00000381118 FEZF2Q8TBJ5 459 aa8.45□□□□□ -1.06
ERCC8-202ENST00000381118 IPO4Q8TEX9 1081 aaKnown RBP8.45□□□□□ -1.06
ERCC8-202ENST00000381118 HES6Q96HZ4 224 aa8.45□□□□□ -1.06
ERCC8-202ENST00000381118 SYT15Q9BQS2 421 aa8.45□□□□□ -1.06
ERCC8-202ENST00000381118 MED10Q9BTT4 135 aa8.45□□□□□ -1.06
ERCC8-202ENST00000381118 NRDE2Q9H7Z3 1164 aa8.45□□□□□ -1.06
ERCC8-202ENST00000381118 ABCB6Q9NP58 842 aa8.45□□□□□ -1.06
ERCC8-202ENST00000381118 CRTAC1Q9NQ79 661 aa8.45□□□□□ -1.06
ERCC8-202ENST00000381118 METTL5Q9NRN9 209 aaKnown RBP8.45□□□□□ -1.06
ERCC8-202ENST00000381118 STRIP2Q9ULQ0 834 aa8.45□□□□□ -1.06
ERCC8-202ENST00000381118 USTQ9Y2C2 406 aa8.45□□□□□ -1.06
ERCC8-202ENST00000381118 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.45□□□□□ -1.06
ERCC8-202ENST00000381118 LTBP2Q14767 1821 aa8.45□□□□□ -1.06
ERCC8-202ENST00000381118 MYBPHLA2RUH7 354 aa8.45□□□□□ -1.06
ERCC8-202ENST00000381118 NRP1O14786 923 aa8.45□□□□□ -1.06
ERCC8-202ENST00000381118 TADA2AO75478 443 aa8.45□□□□□ -1.06
ERCC8-202ENST00000381118 GRAP2O75791 330 aa8.45□□□□□ -1.06
ERCC8-202ENST00000381118 TIMP1P01033 207 aa8.45□□□□□ -1.06
ERCC8-202ENST00000381118 GJC1P36383 396 aa8.45□□□□□ -1.06
ERCC8-202ENST00000381118 SSR1P43307 286 aaKnown RBP8.45□□□□□ -1.06
ERCC8-202ENST00000381118 RABGGTBP53611 331 aa8.45□□□□□ -1.06
ERCC8-202ENST00000381118 TCEAL1Q15170 157 aa8.45□□□□□ -1.06
ERCC8-202ENST00000381118 ERCC6LQ2NKX8 1250 aa8.45□□□□□ -1.06
ERCC8-202ENST00000381118 PKDCCQ504Y2 493 aa8.45□□□□□ -1.06
ERCC8-202ENST00000381118 TEX35Q5T0J7 233 aa8.45□□□□□ -1.06
ERCC8-202ENST00000381118 FAM102AQ5T9C2 384 aaPredicted RBP8.45□□□□□ -1.06
ERCC8-202ENST00000381118 ARHGAP17Q68EM7 881 aa8.45□□□□□ -1.06
ERCC8-202ENST00000381118 OR6B2Q6IFH4 312 aa8.45□□□□□ -1.06
ERCC8-202ENST00000381118 CNKSR3Q6P9H4 555 aa8.45□□□□□ -1.06
ERCC8-202ENST00000381118 METTL23Q86XA0 190 aa8.45□□□□□ -1.06
ERCC8-202ENST00000381118 CEP57Q86XR8 500 aa8.45□□□□□ -1.06
ERCC8-202ENST00000381118 FUKQ8N0W3 1084 aa8.45□□□□□ -1.06
ERCC8-202ENST00000381118 EMC1Q8N766 993 aa8.45□□□□□ -1.06
ERCC8-202ENST00000381118 MSANTD4Q8NCY6 345 aa8.45□□□□□ -1.06
ERCC8-202ENST00000381118 C3orf20Q8ND61 904 aa8.45□□□□□ -1.06
ERCC8-202ENST00000381118 KRT35Q92764 455 aa8.45□□□□□ -1.06
ERCC8-202ENST00000381118 VWCEQ96DN2 955 aa8.45□□□□□ -1.06
ERCC8-202ENST00000381118 PIWIL1Q96J94 861 aaKnown RBP8.45□□□□□ -1.06
ERCC8-202ENST00000381118 DNAI2Q9GZS0 605 aa8.45□□□□□ -1.06
ERCC8-202ENST00000381118 MIS12Q9H081 205 aa8.45□□□□□ -1.06
ERCC8-202ENST00000381118 PTPRDP23468 1912 aa8.44□□□□□ -1.06
ERCC8-202ENST00000381118 PTPRSQ13332 1948 aa8.44□□□□□ -1.06
ERCC8-202ENST00000381118 CTAGE15A4D2H0 777 aa8.44□□□□□ -1.06
ERCC8-202ENST00000381118 M0QZQ0 153 aa8.44□□□□□ -1.06
ERCC8-202ENST00000381118 CEP104O60308 925 aa8.44□□□□□ -1.06
ERCC8-202ENST00000381118 BEST1O76090 585 aa8.44□□□□□ -1.06
ERCC8-202ENST00000381118 CTAGE8P0CG41 777 aa8.44□□□□□ -1.06
ERCC8-202ENST00000381118 KRT3P12035 628 aa8.44□□□□□ -1.06
ERCC8-202ENST00000381118 LCP1P13796 627 aa8.44□□□□□ -1.06
ERCC8-202ENST00000381118 PRLRP16471 622 aa8.44□□□□□ -1.06
ERCC8-202ENST00000381118 RFC1P35251 1148 aaPredicted RBP8.44□□□□□ -1.06
ERCC8-202ENST00000381118 GTF2F1P35269 517 aaKnown RBP eCLIP8.44□□□□□ -1.06
ERCC8-202ENST00000381118 BCAT1P54687 386 aa8.44□□□□□ -1.06
ERCC8-202ENST00000381118 OGDHQ02218 1023 aa8.44□□□□□ -1.06
ERCC8-202ENST00000381118 YWHAHQ04917 246 aaPredicted RBP8.44□□□□□ -1.06
ERCC8-202ENST00000381118 C2orf54Q08AI8 447 aa8.44□□□□□ -1.06
ERCC8-202ENST00000381118 BST2Q10589 180 aaKnown RBP8.44□□□□□ -1.06
ERCC8-202ENST00000381118 ZNF211Q13398 564 aaPredicted RBP8.44□□□□□ -1.06
ERCC8-202ENST00000381118 TUBB2AQ13885 445 aa8.44□□□□□ -1.06
ERCC8-202ENST00000381118 DCAF12L1Q5VU92 463 aa8.44□□□□□ -1.06
ERCC8-202ENST00000381118 OVOS1Q6IE37 1185 aa8.44□□□□□ -1.06
ERCC8-202ENST00000381118 AADACL2Q6P093 401 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms