RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 SHC2P98077 582 aa17.19■□□□□ 0.34
VCX3A-201ENST00000381089 PSMD2Q13200 908 aa17.19■□□□□ 0.34
VCX3A-201ENST00000381089 PLK5Q496M5 336 aa17.19■□□□□ 0.34
VCX3A-201ENST00000381089 ZNF720Q7Z2F6 126 aa17.19■□□□□ 0.34
VCX3A-201ENST00000381089 C11orf74Q86VG3 221 aa17.19■□□□□ 0.34
VCX3A-201ENST00000381089 PDCL2Q8N4E4 241 aa17.19■□□□□ 0.34
VCX3A-201ENST00000381089 RPLP0P6Q8NHW5 317 aa17.19■□□□□ 0.34
VCX3A-201ENST00000381089 SPATA18Q8TC71 538 aa17.19■□□□□ 0.34
VCX3A-201ENST00000381089 CD101Q93033 1021 aa17.19■□□□□ 0.34
VCX3A-201ENST00000381089 ECT2Q9H8V3 914 aa17.19■□□□□ 0.34
VCX3A-201ENST00000381089 MRPL44Q9H9J2 332 aaKnown RBP17.19■□□□□ 0.34
VCX3A-201ENST00000381089 DDX43Q9NXZ2 648 aaKnown RBP17.19■□□□□ 0.34
VCX3A-201ENST00000381089 SEL1LQ9UBV2 794 aa17.19■□□□□ 0.34
VCX3A-201ENST00000381089 AGAP1Q9UPQ3 857 aa17.19■□□□□ 0.34
VCX3A-201ENST00000381089 ATG2BQ96BY7 2078 aa17.19■□□□□ 0.34
VCX3A-201ENST00000381089 TM4SF5O14894 197 aa17.18■□□□□ 0.34
VCX3A-201ENST00000381089 NOL4O94818 638 aa17.18■□□□□ 0.34
VCX3A-201ENST00000381089 ITGB3P05106 788 aa17.18■□□□□ 0.34
VCX3A-201ENST00000381089 PCSK1P29120 753 aa17.18■□□□□ 0.34
VCX3A-201ENST00000381089 GPR15P49685 360 aa17.18■□□□□ 0.34
VCX3A-201ENST00000381089 INTS6LQ5JSJ4 861 aaKnown RBP17.18■□□□□ 0.34
VCX3A-201ENST00000381089 BRAPQ7Z569 592 aa17.18■□□□□ 0.34
VCX3A-201ENST00000381089 SFR1Q86XK3 245 aa17.18■□□□□ 0.34
VCX3A-201ENST00000381089 SPATA2LQ8IUW3 424 aaPredicted RBP17.18■□□□□ 0.34
VCX3A-201ENST00000381089 LRRC52Q8N7C0 313 aa17.18■□□□□ 0.34
VCX3A-201ENST00000381089 LRRC15Q8TF66 581 aa17.18■□□□□ 0.34
VCX3A-201ENST00000381089 CHFRQ96EP1 664 aa17.18■□□□□ 0.34
VCX3A-201ENST00000381089 MYRFLQ96LU7 910 aa17.18■□□□□ 0.34
VCX3A-201ENST00000381089 ACCSQ96QU6 501 aa17.18■□□□□ 0.34
VCX3A-201ENST00000381089 FAM213AQ9BRX8 229 aa17.18■□□□□ 0.34
VCX3A-201ENST00000381089 LSM14BQ9BX40 385 aaKnown RBP17.18■□□□□ 0.34
VCX3A-201ENST00000381089 UPF2Q9HAU5 1272 aaKnown RBP17.18■□□□□ 0.34
VCX3A-201ENST00000381089 RXFP3Q9NSD7 469 aa17.18■□□□□ 0.34
VCX3A-201ENST00000381089 TMLHEQ9NVH6 421 aa17.18■□□□□ 0.34
VCX3A-201ENST00000381089 CCDC39Q9UFE4 941 aa17.18■□□□□ 0.34
VCX3A-201ENST00000381089 EBF1Q9UH73 591 aa17.18■□□□□ 0.34
VCX3A-201ENST00000381089 SMC3Q9UQE7 1217 aa17.18■□□□□ 0.34
VCX3A-201ENST00000381089 OBSL1O75147 1896 aa17.17■□□□□ 0.34
VCX3A-201ENST00000381089 KCNK5O95279 499 aa17.17■□□□□ 0.34
VCX3A-201ENST00000381089 GAP43P17677 238 aa17.17■□□□□ 0.34
VCX3A-201ENST00000381089 CYP2F1P24903 491 aa17.17■□□□□ 0.34
VCX3A-201ENST00000381089 GBP1P32455 592 aa17.17■□□□□ 0.34
VCX3A-201ENST00000381089 LHX1P48742 406 aa17.17■□□□□ 0.34
VCX3A-201ENST00000381089 CREB5Q02930 508 aa17.17■□□□□ 0.34
VCX3A-201ENST00000381089 DMC1Q14565 340 aa17.17■□□□□ 0.34
VCX3A-201ENST00000381089 KCNB1Q14721 858 aa17.17■□□□□ 0.34
VCX3A-201ENST00000381089 ZNF77Q15935 545 aa17.17■□□□□ 0.34
VCX3A-201ENST00000381089 DDR2Q16832 855 aa17.17■□□□□ 0.34
VCX3A-201ENST00000381089 SDHAF4Q5VUM1 108 aa17.17■□□□□ 0.34
VCX3A-201ENST00000381089 LARP1BQ659C4 914 aaKnown RBP17.17■□□□□ 0.34
VCX3A-201ENST00000381089 CRELD2Q6UXH1 353 aaPredicted RBP17.17■□□□□ 0.34
VCX3A-201ENST00000381089 DYMQ7RTS9 669 aa17.17■□□□□ 0.34
VCX3A-201ENST00000381089 FUBP3Q96I24 572 aaKnown RBP eCLIP17.17■□□□□ 0.34
VCX3A-201ENST00000381089 TMX3Q96JJ7 454 aa17.17■□□□□ 0.34
VCX3A-201ENST00000381089 EDEM2Q9BV94 578 aa17.17■□□□□ 0.34
VCX3A-201ENST00000381089 RBAKQ9NYW8 714 aaPredicted RBP17.17■□□□□ 0.34
VCX3A-201ENST00000381089 STK17AQ9UEE5 414 aa17.17■□□□□ 0.34
VCX3A-201ENST00000381089 ITGA11Q9UKX5 1188 aa17.17■□□□□ 0.34
VCX3A-201ENST00000381089 L1RE1Q9UN81 338 aa17.17■□□□□ 0.34
VCX3A-201ENST00000381089 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.17■□□□□ 0.34
VCX3A-201ENST00000381089 NFATC1O95644 943 aa17.16■□□□□ 0.34
VCX3A-201ENST00000381089 CAVIN2O95810 425 aa17.16■□□□□ 0.34
VCX3A-201ENST00000381089 KRT19P08727 400 aa17.16■□□□□ 0.34
VCX3A-201ENST00000381089 ACAT1P24752 427 aaKnown RBP17.16■□□□□ 0.34
VCX3A-201ENST00000381089 ADSSP30520 456 aa17.16■□□□□ 0.34
VCX3A-201ENST00000381089 TXLNAP40222 546 aa17.16■□□□□ 0.34
VCX3A-201ENST00000381089 DGKEP52429 567 aa17.16■□□□□ 0.34
VCX3A-201ENST00000381089 USP4Q13107 963 aa17.16■□□□□ 0.34
VCX3A-201ENST00000381089 CFAP221Q4G0U5 840 aa17.16■□□□□ 0.34
VCX3A-201ENST00000381089 USP39Q53GS9 565 aaKnown RBP17.16■□□□□ 0.34
VCX3A-201ENST00000381089 L1TD1Q5T7N2 865 aaKnown RBP17.16■□□□□ 0.34
VCX3A-201ENST00000381089 DAB2IPQ5VWQ8 1189 aa17.16■□□□□ 0.34
VCX3A-201ENST00000381089 C4orf50Q6ZRC1 276 aa17.16■□□□□ 0.34
VCX3A-201ENST00000381089 BRSK2Q8IWQ3 736 aa17.16■□□□□ 0.34
VCX3A-201ENST00000381089 SYCP3Q8IZU3 236 aa17.16■□□□□ 0.34
VCX3A-201ENST00000381089 CSGALNACT2Q8N6G5 542 aa17.16■□□□□ 0.34
VCX3A-201ENST00000381089 TOP6BLQ8N6T0 577 aa17.16■□□□□ 0.34
VCX3A-201ENST00000381089 STKLD1Q8NE28 680 aa17.16■□□□□ 0.34
VCX3A-201ENST00000381089 TSTD1Q8NFU3 115 aa17.16■□□□□ 0.34
VCX3A-201ENST00000381089 DUSP15Q9H1R2 295 aaPredicted RBP17.16■□□□□ 0.34
VCX3A-201ENST00000381089 SMOC1Q9H4F8 434 aa17.16■□□□□ 0.34
VCX3A-201ENST00000381089 FBRSL1Q9HCM7 1045 aaKnown RBP17.16■□□□□ 0.34
VCX3A-201ENST00000381089 GTF3C4Q9UKN8 822 aa17.16■□□□□ 0.34
VCX3A-201ENST00000381089 PCDHB13Q9Y5F0 798 aa17.16■□□□□ 0.34
VCX3A-201ENST00000381089 USP24Q9UPU5 2620 aa17.15■□□□□ 0.34
VCX3A-201ENST00000381089 TADA3O75528 432 aa17.15■□□□□ 0.34
VCX3A-201ENST00000381089 PPP1R37O75864 691 aa17.15■□□□□ 0.34
VCX3A-201ENST00000381089 GCNT3O95395 438 aa17.15■□□□□ 0.34
VCX3A-201ENST00000381089 TMEM191BP0C7N4 346 aa17.15■□□□□ 0.34
VCX3A-201ENST00000381089 GARTP22102 1010 aa17.15■□□□□ 0.34
VCX3A-201ENST00000381089 RBP5P82980 135 aa17.15■□□□□ 0.34
VCX3A-201ENST00000381089 MYO1EQ12965 1108 aa17.15■□□□□ 0.34
VCX3A-201ENST00000381089 ALCAMQ13740 583 aa17.15■□□□□ 0.34
VCX3A-201ENST00000381089 SF3A1Q15459 793 aaKnown RBP17.15■□□□□ 0.34
VCX3A-201ENST00000381089 EML3Q32P44 896 aa17.15■□□□□ 0.34
VCX3A-201ENST00000381089 SCN4BQ8IWT1 228 aa17.15■□□□□ 0.34
VCX3A-201ENST00000381089 ADGRF2Q8IZF7 708 aa17.15■□□□□ 0.34
VCX3A-201ENST00000381089 C1orf127Q8N9H9 656 aa17.15■□□□□ 0.34
VCX3A-201ENST00000381089 SAAL1Q96ER3 474 aa17.15■□□□□ 0.34
VCX3A-201ENST00000381089 GDAP2Q9NXN4 497 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms