RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 ACCSLQ4AC99 568 aa17.15■□□□□ 0.34
VPS16-203ENST00000380469 PRAMEF18Q5VWM3 479 aa17.15■□□□□ 0.34
VPS16-203ENST00000380469 DENND1BQ6P3S1 775 aa17.15■□□□□ 0.34
VPS16-203ENST00000380469 THNSL1Q8IYQ7 743 aa17.15■□□□□ 0.34
VPS16-203ENST00000380469 SPOCK2Q92563 424 aa17.15■□□□□ 0.34
VPS16-203ENST00000380469 L3MBTL3Q96JM7 780 aaPredicted RBP17.15■□□□□ 0.34
VPS16-203ENST00000380469 SSU72Q9NP77 194 aaKnown RBP17.15■□□□□ 0.34
VPS16-203ENST00000380469 RABGEF1Q9UJ41 708 aa17.15■□□□□ 0.34
VPS16-203ENST00000380469 FZD1Q9UP38 647 aa17.15■□□□□ 0.34
VPS16-203ENST00000380469 SNCAIPQ9Y6H5 919 aa17.15■□□□□ 0.34
VPS16-203ENST00000380469 BANF1O75531 89 aa17.14■□□□□ 0.33
VPS16-203ENST00000380469 PRKCBP05771 671 aa17.14■□□□□ 0.33
VPS16-203ENST00000380469 KRT4P19013 534 aa17.14■□□□□ 0.33
VPS16-203ENST00000380469 RXRBP28702 533 aa17.14■□□□□ 0.33
VPS16-203ENST00000380469 GPX6P59796 221 aa17.14■□□□□ 0.33
VPS16-203ENST00000380469 MYO1EQ12965 1108 aa17.14■□□□□ 0.33
VPS16-203ENST00000380469 MOGSQ13724 837 aa17.14■□□□□ 0.33
VPS16-203ENST00000380469 SLC1A5Q15758 541 aa17.14■□□□□ 0.33
VPS16-203ENST00000380469 SMTNL2Q2TAL5 461 aa17.14■□□□□ 0.33
VPS16-203ENST00000380469 SMYD5Q6GMV2 418 aa17.14■□□□□ 0.33
VPS16-203ENST00000380469 ERP27Q96DN0 273 aa17.14■□□□□ 0.33
VPS16-203ENST00000380469 ANKRD36BP1Q96IX9 119 aa17.14■□□□□ 0.33
VPS16-203ENST00000380469 MAK16Q9BXY0 300 aaKnown RBP17.14■□□□□ 0.33
VPS16-203ENST00000380469 SLCO1B3Q9NPD5 702 aa17.14■□□□□ 0.33
VPS16-203ENST00000380469 SAE1Q9UBE0 346 aaPredicted RBP17.14■□□□□ 0.33
VPS16-203ENST00000380469 CPSF3Q9UKF6 684 aaKnown RBP17.14■□□□□ 0.33
VPS16-203ENST00000380469 GRID1Q9ULK0 1009 aa17.14■□□□□ 0.33
VPS16-203ENST00000380469 GJA3Q9Y6H8 435 aa17.14■□□□□ 0.33
VPS16-203ENST00000380469 LOC102724159A0A0B4J2E5 919 aa17.14■□□□□ 0.33
VPS16-203ENST00000380469 A8MUI8 341 aa17.14■□□□□ 0.33
VPS16-203ENST00000380469 RPSAP08865 295 aaKnown RBP17.14■□□□□ 0.33
VPS16-203ENST00000380469 KDELR1P24390 212 aa17.14■□□□□ 0.33
VPS16-203ENST00000380469 ASPAP45381 313 aa17.14■□□□□ 0.33
VPS16-203ENST00000380469 PSMC1P62191 440 aaKnown RBP17.14■□□□□ 0.33
VPS16-203ENST00000380469 SLC25A11Q02978 314 aaKnown RBP17.14■□□□□ 0.33
VPS16-203ENST00000380469 MXD4Q14582 209 aaPredicted RBP17.14■□□□□ 0.33
VPS16-203ENST00000380469 PWP2Q15269 919 aaKnown RBP17.14■□□□□ 0.33
VPS16-203ENST00000380469 KLHL38Q2WGJ6 581 aa17.14■□□□□ 0.33
VPS16-203ENST00000380469 DALRD3Q5D0E6 543 aaKnown RBP17.14■□□□□ 0.33
VPS16-203ENST00000380469 TLDC1Q6P9B6 456 aa17.14■□□□□ 0.33
VPS16-203ENST00000380469 LVRNQ6Q4G3 990 aa17.14■□□□□ 0.33
VPS16-203ENST00000380469 C3orf62Q6ZUJ4 267 aa17.14■□□□□ 0.33
VPS16-203ENST00000380469 BBS12Q6ZW61 710 aa17.14■□□□□ 0.33
VPS16-203ENST00000380469 PALM2Q8IXS6 379 aa17.14■□□□□ 0.33
VPS16-203ENST00000380469 ANKLE1Q8NAG6 615 aa17.14■□□□□ 0.33
VPS16-203ENST00000380469 CPT1BQ92523 772 aa17.14■□□□□ 0.33
VPS16-203ENST00000380469 FAM167AQ96KS9 214 aa17.14■□□□□ 0.33
VPS16-203ENST00000380469 LHX5Q9H2C1 402 aa17.14■□□□□ 0.33
VPS16-203ENST00000380469 SYNCQ9H7C4 482 aa17.14■□□□□ 0.33
VPS16-203ENST00000380469 PPME1Q9Y570 386 aa17.14■□□□□ 0.33
VPS16-203ENST00000380469 TCF7P36402 384 aaPredicted RBP17.13■□□□□ 0.33
VPS16-203ENST00000380469 LAMTOR4Q0VGL1 99 aa17.13■□□□□ 0.33
VPS16-203ENST00000380469 TFDP1Q14186 410 aa17.13■□□□□ 0.33
VPS16-203ENST00000380469 KCNT1Q5JUK3 1230 aa17.13■□□□□ 0.33
VPS16-203ENST00000380469 RHPN2Q8IUC4 686 aa17.13■□□□□ 0.33
VPS16-203ENST00000380469 KCTD6Q8NC69 237 aa17.13■□□□□ 0.33
VPS16-203ENST00000380469 SEPT1Q8WYJ6 367 aa17.13■□□□□ 0.33
VPS16-203ENST00000380469 ZNF75CPQ92670 426 aaPredicted RBP17.13■□□□□ 0.33
VPS16-203ENST00000380469 ADAM33Q9BZ11 813 aa17.13■□□□□ 0.33
VPS16-203ENST00000380469 NXF1Q9UBU9 619 aaKnown RBP17.13■□□□□ 0.33
VPS16-203ENST00000380469 CHKBQ9Y259 395 aa17.13■□□□□ 0.33
VPS16-203ENST00000380469 C15orf41Q9Y2V0 281 aa17.13■□□□□ 0.33
VPS16-203ENST00000380469 SMAPO00193 183 aa17.13■□□□□ 0.33
VPS16-203ENST00000380469 LRCH4O75427 683 aa17.13■□□□□ 0.33
VPS16-203ENST00000380469 SSTR1P30872 391 aa17.13■□□□□ 0.33
VPS16-203ENST00000380469 PTPN20Q4JDL3 420 aa17.13■□□□□ 0.33
VPS16-203ENST00000380469 ZC3H12AQ5D1E8 599 aaKnown RBP17.13■□□□□ 0.33
VPS16-203ENST00000380469 FNBP1LQ5T0N5 605 aa17.13■□□□□ 0.33
VPS16-203ENST00000380469 FYB2Q5VWT5 728 aa17.13■□□□□ 0.33
VPS16-203ENST00000380469 ANKRD22Q5VYY1 191 aa17.13■□□□□ 0.33
VPS16-203ENST00000380469 CDCA2Q69YH5 1023 aaPredicted RBP17.13■□□□□ 0.33
VPS16-203ENST00000380469 ADGRD1Q6QNK2 874 aa17.13■□□□□ 0.33
VPS16-203ENST00000380469 NAT8LQ8N9F0 302 aa17.13■□□□□ 0.33
VPS16-203ENST00000380469 RNF149Q8NC42 400 aa17.13■□□□□ 0.33
VPS16-203ENST00000380469 JOSD2Q8TAC2 188 aa17.13■□□□□ 0.33
VPS16-203ENST00000380469 FNIP1Q8TF40 1166 aa17.13■□□□□ 0.33
VPS16-203ENST00000380469 NSMCE1Q8WV22 266 aa17.13■□□□□ 0.33
VPS16-203ENST00000380469 C2orf40Q9H1Z8 148 aa17.13■□□□□ 0.33
VPS16-203ENST00000380469 C10orf88Q9H8K7 445 aa17.13■□□□□ 0.33
VPS16-203ENST00000380469 WDR35Q9P2L0 1181 aa17.13■□□□□ 0.33
VPS16-203ENST00000380469 CLUHO75153 1309 aa17.12■□□□□ 0.33
VPS16-203ENST00000380469 ATP2A2P16615 1042 aaKnown RBP17.12■□□□□ 0.33
VPS16-203ENST00000380469 IL1R2P27930 398 aa17.12■□□□□ 0.33
VPS16-203ENST00000380469 RPL22P35268 128 aaKnown RBP17.12■□□□□ 0.33
VPS16-203ENST00000380469 GDF10P55107 478 aa17.12■□□□□ 0.33
VPS16-203ENST00000380469 TMEM132AQ24JP5 1023 aa17.12■□□□□ 0.33
VPS16-203ENST00000380469 PARP6Q2NL67 630 aa17.12■□□□□ 0.33
VPS16-203ENST00000380469 RFX6Q8HWS3 928 aa17.12■□□□□ 0.33
VPS16-203ENST00000380469 EXOC8Q8IYI6 725 aa17.12■□□□□ 0.33
VPS16-203ENST00000380469 PDIK1LQ8N165 341 aa17.12■□□□□ 0.33
VPS16-203ENST00000380469 AGGF1Q8N302 714 aaeCLIP17.12■□□□□ 0.33
VPS16-203ENST00000380469 XYLT2Q9H1B5 865 aa17.12■□□□□ 0.33
VPS16-203ENST00000380469 LRMDAQ9H2I8 198 aa17.12■□□□□ 0.33
VPS16-203ENST00000380469 ACSS3Q9H6R3 686 aa17.12■□□□□ 0.33
VPS16-203ENST00000380469 ZMYND8Q9ULU4 1186 aaPredicted RBP17.12■□□□□ 0.33
VPS16-203ENST00000380469 WFS1O76024 890 aa17.12■□□□□ 0.33
VPS16-203ENST00000380469 HOXC6P09630 235 aa17.12■□□□□ 0.33
VPS16-203ENST00000380469 RASSF2P50749 326 aa17.12■□□□□ 0.33
VPS16-203ENST00000380469 MSS51Q4VC12 460 aa17.12■□□□□ 0.33
VPS16-203ENST00000380469 ARFGAP1Q8N6T3 406 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 163.2 ms