RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 CLUL1Q15846 466 aa13.07□□□□□ -0.32
PRPF40B-202ENST00000380281 CDO1Q16878 200 aa13.07□□□□□ -0.32
PRPF40B-202ENST00000380281 RHBDF2Q6PJF5 856 aa13.07□□□□□ -0.32
PRPF40B-202ENST00000380281 B3GNT9Q6UX72 402 aa13.07□□□□□ -0.32
PRPF40B-202ENST00000380281 FAM160B2Q86V87 743 aa13.07□□□□□ -0.32
PRPF40B-202ENST00000380281 MAP4K3Q8IVH8 894 aa13.07□□□□□ -0.32
PRPF40B-202ENST00000380281 CTAGE3PQ8IX95 158 aa13.07□□□□□ -0.32
PRPF40B-202ENST00000380281 HSPH1Q92598 858 aa13.07□□□□□ -0.32
PRPF40B-202ENST00000380281 TTC17Q96AE7 1141 aa13.07□□□□□ -0.32
PRPF40B-202ENST00000380281 XPNPEP1Q9NQW7 623 aa13.07□□□□□ -0.32
PRPF40B-202ENST00000380281 ZBED4O75132 1171 aa13.07□□□□□ -0.32
PRPF40B-202ENST00000380281 GJB1P08034 283 aa13.07□□□□□ -0.32
PRPF40B-202ENST00000380281 KITP10721 976 aa13.07□□□□□ -0.32
PRPF40B-202ENST00000380281 FGFR1P11362 822 aa13.07□□□□□ -0.32
PRPF40B-202ENST00000380281 CETN2P41208 172 aa13.07□□□□□ -0.32
PRPF40B-202ENST00000380281 GDF10P55107 478 aa13.07□□□□□ -0.32
PRPF40B-202ENST00000380281 MPP3Q13368 585 aa13.07□□□□□ -0.32
PRPF40B-202ENST00000380281 TAF5Q15542 800 aa13.07□□□□□ -0.32
PRPF40B-202ENST00000380281 NFIL3Q16649 462 aa13.07□□□□□ -0.32
PRPF40B-202ENST00000380281 ANKRD22Q5VYY1 191 aa13.07□□□□□ -0.32
PRPF40B-202ENST00000380281 SAMD7Q7Z3H4 446 aa13.07□□□□□ -0.32
PRPF40B-202ENST00000380281 AZIN2Q96A70 460 aa13.07□□□□□ -0.32
PRPF40B-202ENST00000380281 IWS1Q96ST2 819 aa13.07□□□□□ -0.32
PRPF40B-202ENST00000380281 MAK16Q9BXY0 300 aaKnown RBP13.07□□□□□ -0.32
PRPF40B-202ENST00000380281 TBC1D22BQ9NU19 505 aa13.07□□□□□ -0.32
PRPF40B-202ENST00000380281 MARCOQ9UEW3 520 aaPredicted RBP13.07□□□□□ -0.32
PRPF40B-202ENST00000380281 UBIAD1Q9Y5Z9 338 aa13.07□□□□□ -0.32
PRPF40B-202ENST00000380281 WASF2Q9Y6W5 498 aa13.07□□□□□ -0.32
PRPF40B-202ENST00000380281 CCDC195A0A1B0GUA6 201 aa13.06□□□□□ -0.32
PRPF40B-202ENST00000380281 P4HA2O15460 535 aa13.06□□□□□ -0.32
PRPF40B-202ENST00000380281 LYNP07948 512 aa13.06□□□□□ -0.32
PRPF40B-202ENST00000380281 CD48P09326 243 aa13.06□□□□□ -0.32
PRPF40B-202ENST00000380281 HMGCS2P54868 508 aa13.06□□□□□ -0.32
PRPF40B-202ENST00000380281 ALCAMQ13740 583 aa13.06□□□□□ -0.32
PRPF40B-202ENST00000380281 TAF1BQ53T94 588 aaPredicted RBP13.06□□□□□ -0.32
PRPF40B-202ENST00000380281 ACSBG2Q5FVE4 666 aa13.06□□□□□ -0.32
PRPF40B-202ENST00000380281 SLC27A3Q5K4L6 730 aa13.06□□□□□ -0.32
PRPF40B-202ENST00000380281 WASHC2DQ5SRD0 308 aa13.06□□□□□ -0.32
PRPF40B-202ENST00000380281 MFSD5Q6N075 450 aa13.06□□□□□ -0.32
PRPF40B-202ENST00000380281 DNAJC24Q6P3W2 148 aa13.06□□□□□ -0.32
PRPF40B-202ENST00000380281 DLK2Q6UY11 383 aa13.06□□□□□ -0.32
PRPF40B-202ENST00000380281 TAS1R3Q7RTX0 852 aa13.06□□□□□ -0.32
PRPF40B-202ENST00000380281 MIPEPQ99797 713 aa13.06□□□□□ -0.32
PRPF40B-202ENST00000380281 RNF19AQ9NV58 838 aa13.06□□□□□ -0.32
PRPF40B-202ENST00000380281 TRPC5Q9UL62 973 aaPredicted RBP13.06□□□□□ -0.32
PRPF40B-202ENST00000380281 AVILO75366 819 aa13.06□□□□□ -0.32
PRPF40B-202ENST00000380281 HADHBP55084 474 aaKnown RBP13.06□□□□□ -0.32
PRPF40B-202ENST00000380281 NCKAP1LP55160 1127 aa13.06□□□□□ -0.32
PRPF40B-202ENST00000380281 CDH8P55286 799 aa13.06□□□□□ -0.32
PRPF40B-202ENST00000380281 OGDHQ02218 1023 aa13.06□□□□□ -0.32
PRPF40B-202ENST00000380281 TNFAIP8L3Q5GJ75 292 aa13.06□□□□□ -0.32
PRPF40B-202ENST00000380281 SPDYCQ5MJ68 293 aa13.06□□□□□ -0.32
PRPF40B-202ENST00000380281 RSBN1LQ6PCB5 846 aaPredicted RBP13.06□□□□□ -0.32
PRPF40B-202ENST00000380281 C4orf50Q6ZRC1 276 aa13.06□□□□□ -0.32
PRPF40B-202ENST00000380281 C3orf62Q6ZUJ4 267 aa13.06□□□□□ -0.32
PRPF40B-202ENST00000380281 USP37Q86T82 979 aa13.06□□□□□ -0.32
PRPF40B-202ENST00000380281 PYROXD1Q8WU10 500 aa13.06□□□□□ -0.32
PRPF40B-202ENST00000380281 ZNF606Q8WXB4 792 aa13.06□□□□□ -0.32
PRPF40B-202ENST00000380281 NMD3Q96D46 503 aaKnown RBP13.06□□□□□ -0.32
PRPF40B-202ENST00000380281 MTMR12Q9C0I1 747 aa13.06□□□□□ -0.32
PRPF40B-202ENST00000380281 HAPLN2Q9GZV7 340 aa13.06□□□□□ -0.32
PRPF40B-202ENST00000380281 GJA3Q9Y6H8 435 aa13.06□□□□□ -0.32
PRPF40B-202ENST00000380281 TCRBV7S3A2A0A539 114 aa13.06□□□□□ -0.32
PRPF40B-202ENST00000380281 VNN1O95497 513 aa13.06□□□□□ -0.32
PRPF40B-202ENST00000380281 MAPTP10636 758 aaKnown RBP13.06□□□□□ -0.32
PRPF40B-202ENST00000380281 CUL2Q13617 745 aa13.06□□□□□ -0.32
PRPF40B-202ENST00000380281 CROCCP2Q86T23 111 aa13.06□□□□□ -0.32
PRPF40B-202ENST00000380281 LRRC6Q86X45 466 aa13.06□□□□□ -0.32
PRPF40B-202ENST00000380281 PALM2Q8IXS6 379 aa13.06□□□□□ -0.32
PRPF40B-202ENST00000380281 C4orf19Q8IY42 314 aa13.06□□□□□ -0.32
PRPF40B-202ENST00000380281 NETO2Q8NC67 525 aa13.06□□□□□ -0.32
PRPF40B-202ENST00000380281 MIPOL1Q8TD10 442 aa13.06□□□□□ -0.32
PRPF40B-202ENST00000380281 PRR11Q96HE9 360 aaPredicted RBP13.06□□□□□ -0.32
PRPF40B-202ENST00000380281 PXMP2Q9NR77 195 aa13.06□□□□□ -0.32
PRPF40B-202ENST00000380281 FBXO6Q9NRD1 293 aaPredicted RBP13.06□□□□□ -0.32
PRPF40B-202ENST00000380281 SLC17A7Q9P2U7 560 aa13.06□□□□□ -0.32
PRPF40B-202ENST00000380281 NRAPQ86VF7 1730 aa13.05□□□□□ -0.32
PRPF40B-202ENST00000380281 PDLIM1O00151 329 aa13.05□□□□□ -0.32
PRPF40B-202ENST00000380281 CST8O60676 142 aa13.05□□□□□ -0.32
PRPF40B-202ENST00000380281 HSD17B4P51659 736 aa13.05□□□□□ -0.32
PRPF40B-202ENST00000380281 MYL6P60660 151 aa13.05□□□□□ -0.32
PRPF40B-202ENST00000380281 NCOA4Q13772 614 aa13.05□□□□□ -0.32
PRPF40B-202ENST00000380281 SPARCL1Q14515 664 aa13.05□□□□□ -0.32
PRPF40B-202ENST00000380281 WDR72Q3MJ13 1102 aa13.05□□□□□ -0.32
PRPF40B-202ENST00000380281 MSS51Q4VC12 460 aa13.05□□□□□ -0.32
PRPF40B-202ENST00000380281 GPAT2Q6NUI2 795 aa13.05□□□□□ -0.32
PRPF40B-202ENST00000380281 DNAJC14Q6Y2X3 702 aaPredicted RBP13.05□□□□□ -0.32
PRPF40B-202ENST00000380281 MCF2L2Q86YR7 1114 aa13.05□□□□□ -0.32
PRPF40B-202ENST00000380281 LRRC71Q8N4P6 559 aa13.05□□□□□ -0.32
PRPF40B-202ENST00000380281 FAM71DQ8N9W8 422 aa13.05□□□□□ -0.32
PRPF40B-202ENST00000380281 MAGEB18Q96M61 343 aa13.05□□□□□ -0.32
PRPF40B-202ENST00000380281 CFAP57Q96MR6 1250 aa13.05□□□□□ -0.32
PRPF40B-202ENST00000380281 TRIM56Q9BRZ2 755 aaKnown RBP13.05□□□□□ -0.32
PRPF40B-202ENST00000380281 FAM192AQ9GZU8 254 aa13.05□□□□□ -0.32
PRPF40B-202ENST00000380281 ARMCX1Q9P291 453 aa13.05□□□□□ -0.32
PRPF40B-202ENST00000380281 PDP2Q9P2J9 529 aa13.05□□□□□ -0.32
PRPF40B-202ENST00000380281 TMCO1Q9UM00 188 aa13.05□□□□□ -0.32
PRPF40B-202ENST00000380281 COL24A1Q17RW2 1714 aa13.05□□□□□ -0.32
PRPF40B-202ENST00000380281 WNT10BO00744 389 aa13.05□□□□□ -0.32
PRPF40B-202ENST00000380281 NOMO3P69849 1222 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms