RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 APOFQ13790 326 aa7.83□□□□□ -1.16
CDKL5-201ENST00000379989 KRT81Q14533 505 aa7.83□□□□□ -1.16
CDKL5-201ENST00000379989 PLEKHG4Q58EX7 1191 aa7.83□□□□□ -1.16
CDKL5-201ENST00000379989 KIAA1755Q5JYT7 1200 aa7.83□□□□□ -1.16
CDKL5-201ENST00000379989 TMC7Q7Z402 723 aa7.83□□□□□ -1.16
CDKL5-201ENST00000379989 LSMEM2Q8N112 164 aa7.83□□□□□ -1.16
CDKL5-201ENST00000379989 LILRB4Q8NHJ6 448 aa7.83□□□□□ -1.16
CDKL5-201ENST00000379989 FAM172AQ8WUF8 416 aa7.83□□□□□ -1.16
CDKL5-201ENST00000379989 C7orf43Q8WVR3 580 aa7.83□□□□□ -1.16
CDKL5-201ENST00000379989 NSL1Q96IY1 281 aa7.83□□□□□ -1.16
CDKL5-201ENST00000379989 SERPINB12Q96P63 405 aa7.83□□□□□ -1.16
CDKL5-201ENST00000379989 UNKQ9C0B0 810 aaKnown RBP7.83□□□□□ -1.16
CDKL5-201ENST00000379989 MMRN2Q9H8L6 949 aa7.83□□□□□ -1.16
CDKL5-201ENST00000379989 RIC8AQ9NPQ8 531 aa7.83□□□□□ -1.16
CDKL5-201ENST00000379989 CYLDQ9NQC7 956 aa7.83□□□□□ -1.16
CDKL5-201ENST00000379989 NKIRAS1Q9NYS0 192 aa7.83□□□□□ -1.16
CDKL5-201ENST00000379989 POU2F3Q9UKI9 436 aa7.83□□□□□ -1.16
CDKL5-201ENST00000379989 PCDHGA11Q9Y5H2 935 aa7.83□□□□□ -1.16
CDKL5-201ENST00000379989 MYOCOSA0A1B0GUC4 107 aa7.83□□□□□ -1.16
CDKL5-201ENST00000379989 TLR2O60603 784 aa7.83□□□□□ -1.16
CDKL5-201ENST00000379989 C6orf222P0C671 652 aaPredicted RBP7.83□□□□□ -1.16
CDKL5-201ENST00000379989 RBP3P10745 1247 aa7.83□□□□□ -1.16
CDKL5-201ENST00000379989 S100A5P33763 92 aa7.83□□□□□ -1.16
CDKL5-201ENST00000379989 SLC5A3P53794 718 aa7.83□□□□□ -1.16
CDKL5-201ENST00000379989 HIRAP54198 1017 aaPredicted RBP7.83□□□□□ -1.16
CDKL5-201ENST00000379989 PTENP60484 403 aa7.83□□□□□ -1.16
CDKL5-201ENST00000379989 ACTR3P61158 418 aa7.83□□□□□ -1.16
CDKL5-201ENST00000379989 TIGD2Q4W5G0 525 aa7.83□□□□□ -1.16
CDKL5-201ENST00000379989 DACT2Q5SW24 774 aa7.83□□□□□ -1.16
CDKL5-201ENST00000379989 WDR78Q5VTH9 848 aa7.83□□□□□ -1.16
CDKL5-201ENST00000379989 TWF2Q6IBS0 349 aaKnown RBP7.83□□□□□ -1.16
CDKL5-201ENST00000379989 NEK8Q86SG6 692 aa7.83□□□□□ -1.16
CDKL5-201ENST00000379989 DHDDSQ86SQ9 333 aa7.83□□□□□ -1.16
CDKL5-201ENST00000379989 PCYOX1LQ8NBM8 494 aa7.83□□□□□ -1.16
CDKL5-201ENST00000379989 AGBL3Q8NEM8 1001 aa7.83□□□□□ -1.16
CDKL5-201ENST00000379989 GIPC2Q8TF65 315 aa7.83□□□□□ -1.16
CDKL5-201ENST00000379989 PRR11Q96HE9 360 aaPredicted RBP7.83□□□□□ -1.16
CDKL5-201ENST00000379989 PLEKHA8Q96JA3 519 aa7.83□□□□□ -1.16
CDKL5-201ENST00000379989 SACM1LQ9NTJ5 587 aa7.83□□□□□ -1.16
CDKL5-201ENST00000379989 HACD3Q9P035 362 aa7.83□□□□□ -1.16
CDKL5-201ENST00000379989 KANSL3Q9P2N6 904 aa7.83□□□□□ -1.16
CDKL5-201ENST00000379989 ARMCX3Q9UH62 379 aaPredicted RBP7.83□□□□□ -1.16
CDKL5-201ENST00000379989 KDM3AQ9Y4C1 1321 aa7.83□□□□□ -1.16
CDKL5-201ENST00000379989 GOLGA8CPA6NN73 597 aa7.83□□□□□ -1.16
CDKL5-201ENST00000379989 MCF2LO15068 1137 aa7.83□□□□□ -1.16
CDKL5-201ENST00000379989 RARBP10826 455 aa7.83□□□□□ -1.16
CDKL5-201ENST00000379989 PEX2P28328 305 aa7.83□□□□□ -1.16
CDKL5-201ENST00000379989 ATP5DP30049 168 aa7.83□□□□□ -1.16
CDKL5-201ENST00000379989 ETV3P41162 512 aa7.83□□□□□ -1.16
CDKL5-201ENST00000379989 CRKP46108 304 aa7.83□□□□□ -1.16
CDKL5-201ENST00000379989 KCNQ4P56696 695 aa7.83□□□□□ -1.16
CDKL5-201ENST00000379989 RPL26P61254 145 aaKnown RBP7.83□□□□□ -1.16
CDKL5-201ENST00000379989 FOLH1Q04609 750 aa7.83□□□□□ -1.16
CDKL5-201ENST00000379989 ZNF543Q08ER8 600 aa7.83□□□□□ -1.16
CDKL5-201ENST00000379989 RRP1BQ14684 758 aaKnown RBP7.83□□□□□ -1.16
CDKL5-201ENST00000379989 TLR1Q15399 786 aa7.83□□□□□ -1.16
CDKL5-201ENST00000379989 CYP2A13Q16696 494 aa7.83□□□□□ -1.16
CDKL5-201ENST00000379989 BOLA3Q53S33 107 aa7.83□□□□□ -1.16
CDKL5-201ENST00000379989 TMCO4Q5TGY1 634 aa7.83□□□□□ -1.16
CDKL5-201ENST00000379989 ILDR2Q71H61 639 aa7.83□□□□□ -1.16
CDKL5-201ENST00000379989 NET1Q7Z628 596 aaPredicted RBP7.83□□□□□ -1.16
CDKL5-201ENST00000379989 ADGRG6Q86SQ4 1221 aa7.83□□□□□ -1.16
CDKL5-201ENST00000379989 MAPKAPK5Q8IW41 473 aa7.83□□□□□ -1.16
CDKL5-201ENST00000379989 ELMOD1Q8N336 334 aa7.83□□□□□ -1.16
CDKL5-201ENST00000379989 MARVELD2Q8N4S9 558 aa7.83□□□□□ -1.16
CDKL5-201ENST00000379989 C4orf32Q8N8J7 132 aa7.83□□□□□ -1.16
CDKL5-201ENST00000379989 BORCS5Q969J3 196 aa7.83□□□□□ -1.16
CDKL5-201ENST00000379989 AS3MTQ9HBK9 375 aa7.83□□□□□ -1.16
CDKL5-201ENST00000379989 GPSM3Q9Y4H4 160 aa7.83□□□□□ -1.16
CDKL5-201ENST00000379989 BRCA1P38398 1863 aaKnown RBP7.82□□□□□ -1.16
CDKL5-201ENST00000379989 A0A087X0T9 212 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 BICDL2A1A5D9 508 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 PSMA7O14818 248 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 FOXD2O60548 495 aaPredicted RBP7.82□□□□□ -1.16
CDKL5-201ENST00000379989 FAM228BP0C875 321 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 FDX1P10109 184 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 THRAP10827 490 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 ADSLP30566 484 aaPredicted RBP7.82□□□□□ -1.16
CDKL5-201ENST00000379989 CDK9P50750 372 aaKnown RBP7.82□□□□□ -1.16
CDKL5-201ENST00000379989 ZNF132P52740 706 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 TGFB2P61812 414 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 PTGDRQ13258 359 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 TRMT5Q32P41 509 aaKnown RBP7.82□□□□□ -1.16
CDKL5-201ENST00000379989 ZNF568Q3ZCX4 644 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 FAM47AQ5JRC9 791 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 FAM83AQ86UY5 434 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 JAMLQ86YT9 394 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 MMAAQ8IVH4 418 aaKnown RBP7.82□□□□□ -1.16
CDKL5-201ENST00000379989 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.82□□□□□ -1.16
CDKL5-201ENST00000379989 REXO1Q8N1G1 1221 aaKnown RBP7.82□□□□□ -1.16
CDKL5-201ENST00000379989 NATD1Q8N6N6 113 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 C12orf50Q8NA57 414 aaPredicted RBP7.82□□□□□ -1.16
CDKL5-201ENST00000379989 PDZD8Q8NEN9 1154 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 BRSK1Q8TDC3 778 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 CAMKK2Q96RR4 588 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 PAIP1Q9H074 479 aaKnown RBP7.82□□□□□ -1.16
CDKL5-201ENST00000379989 EHMT1Q9H9B1 1298 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 ZNF304Q9HCX3 659 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 ERVK-5Q9HDB9 667 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms