RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 TLR2O60603 784 aa14.86□□□□□ -0.03
SHROOM1-203ENST00000378679 SMIM10L2AP0DMW4 78 aa14.86□□□□□ -0.03
SHROOM1-203ENST00000378679 SMIM10L2BP0DMW5 78 aa14.86□□□□□ -0.03
SHROOM1-203ENST00000378679 SDCCAG8Q86SQ7 713 aaPredicted RBP14.86□□□□□ -0.03
SHROOM1-203ENST00000378679 SMC1BQ8NDV3 1235 aa14.86□□□□□ -0.03
SHROOM1-203ENST00000378679 LNX1Q8TBB1 728 aaPredicted RBP14.86□□□□□ -0.03
SHROOM1-203ENST00000378679 ZBTB10Q96DT7 871 aa14.86□□□□□ -0.03
SHROOM1-203ENST00000378679 GCNAQ96QF7 691 aa14.86□□□□□ -0.03
SHROOM1-203ENST00000378679 FSD1LQ9BXM9 530 aa14.86□□□□□ -0.03
SHROOM1-203ENST00000378679 ARHGAP28Q9P2N2 729 aa14.86□□□□□ -0.03
SHROOM1-203ENST00000378679 PCDHGC5Q9Y5F6 944 aa14.86□□□□□ -0.03
SHROOM1-203ENST00000378679 ITGB4P16144 1822 aa14.85□□□□□ -0.03
SHROOM1-203ENST00000378679 MROH7Q68CQ1 1323 aa14.85□□□□□ -0.03
SHROOM1-203ENST00000378679 ZSCAN5CA6NGD5 496 aaPredicted RBP14.85□□□□□ -0.03
SHROOM1-203ENST00000378679 PSTPIP1O43586 416 aa14.85□□□□□ -0.03
SHROOM1-203ENST00000378679 KRT38O76015 456 aa14.85□□□□□ -0.03
SHROOM1-203ENST00000378679 GLI1P08151 1106 aa14.85□□□□□ -0.03
SHROOM1-203ENST00000378679 HMBSP08397 361 aa14.85□□□□□ -0.03
SHROOM1-203ENST00000378679 FNTAP49354 379 aa14.85□□□□□ -0.03
SHROOM1-203ENST00000378679 BCAT1P54687 386 aa14.85□□□□□ -0.03
SHROOM1-203ENST00000378679 PPP2R2AP63151 447 aa14.85□□□□□ -0.03
SHROOM1-203ENST00000378679 C11orf63Q6NUN7 778 aa14.85□□□□□ -0.03
SHROOM1-203ENST00000378679 CREG2Q8IUH2 290 aa14.85□□□□□ -0.03
SHROOM1-203ENST00000378679 DCP1BQ8IZD4 617 aaKnown RBP14.85□□□□□ -0.03
SHROOM1-203ENST00000378679 GAD1Q99259 594 aa14.85□□□□□ -0.03
SHROOM1-203ENST00000378679 SEPT5Q99719 369 aaPredicted RBP14.85□□□□□ -0.03
SHROOM1-203ENST00000378679 CNPY3Q9BT09 278 aa14.85□□□□□ -0.03
SHROOM1-203ENST00000378679 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.85□□□□□ -0.034e-7■■■□□ 17.2
SHROOM1-203ENST00000378679 M0QYT0 321 aa14.85□□□□□ -0.03
SHROOM1-203ENST00000378679 DHX15O43143 795 aaKnown RBP14.85□□□□□ -0.03
SHROOM1-203ENST00000378679 ODC1P11926 461 aa14.85□□□□□ -0.03
SHROOM1-203ENST00000378679 NOVP48745 357 aa14.85□□□□□ -0.03
SHROOM1-203ENST00000378679 ITGA8P53708 1063 aa14.85□□□□□ -0.03
SHROOM1-203ENST00000378679 VEPH1Q14D04 833 aa14.85□□□□□ -0.03
SHROOM1-203ENST00000378679 SH3D19Q5HYK7 790 aa14.85□□□□□ -0.03
SHROOM1-203ENST00000378679 MTHFD1LQ6UB35 978 aa14.85□□□□□ -0.03
SHROOM1-203ENST00000378679 EPM2AIP1Q7L775 607 aaPredicted RBP14.85□□□□□ -0.03
SHROOM1-203ENST00000378679 ANKRD23Q86SG2 305 aa14.85□□□□□ -0.03
SHROOM1-203ENST00000378679 HDAC7Q8WUI4 952 aa14.85□□□□□ -0.03
SHROOM1-203ENST00000378679 SEMA4DQ92854 862 aa14.85□□□□□ -0.03
SHROOM1-203ENST00000378679 L3MBTL3Q96JM7 780 aaPredicted RBP14.85□□□□□ -0.03
SHROOM1-203ENST00000378679 ZIM3Q96PE6 472 aa14.85□□□□□ -0.03
SHROOM1-203ENST00000378679 GPATCH2LQ9NWQ4 482 aa14.85□□□□□ -0.03
SHROOM1-203ENST00000378679 KLHL38Q2WGJ6 581 aa14.85□□□□□ -0.03
SHROOM1-203ENST00000378679 APTXQ7Z2E3 356 aaKnown RBP14.85□□□□□ -0.03
SHROOM1-203ENST00000378679 FBXO25Q8TCJ0 367 aa14.85□□□□□ -0.03
SHROOM1-203ENST00000378679 CXorf56Q9H5V9 222 aa14.85□□□□□ -0.03
SHROOM1-203ENST00000378679 CPSF2Q9P2I0 782 aaKnown RBP14.85□□□□□ -0.03
SHROOM1-203ENST00000378679 ARF4P18085 180 aaPredicted RBP14.84□□□□□ -0.03
SHROOM1-203ENST00000378679 CENPCQ03188 943 aa14.84□□□□□ -0.03
SHROOM1-203ENST00000378679 FAM47EQ6ZV65 393 aa14.84□□□□□ -0.03
SHROOM1-203ENST00000378679 FAM131BQ86XD5 332 aa14.84□□□□□ -0.03
SHROOM1-203ENST00000378679 FAM71DQ8N9W8 422 aa14.84□□□□□ -0.03
SHROOM1-203ENST00000378679 TTC17Q96AE7 1141 aa14.84□□□□□ -0.03
SHROOM1-203ENST00000378679 VCPIP1Q96JH7 1222 aa14.84□□□□□ -0.03
SHROOM1-203ENST00000378679 MFSD14AQ96MC6 490 aa14.84□□□□□ -0.03
SHROOM1-203ENST00000378679 KIF9Q9HAQ2 790 aa14.84□□□□□ -0.03
SHROOM1-203ENST00000378679 TPX2Q9ULW0 747 aaKnown RBP14.84□□□□□ -0.03
SHROOM1-203ENST00000378679 MAFBQ9Y5Q3 323 aaPredicted RBP14.84□□□□□ -0.03
SHROOM1-203ENST00000378679 USP54Q70EL1 1684 aa14.84□□□□□ -0.03
SHROOM1-203ENST00000378679 DFFAO00273 331 aa14.84□□□□□ -0.03
SHROOM1-203ENST00000378679 NOL4O94818 638 aa14.84□□□□□ -0.03
SHROOM1-203ENST00000378679 PYGMP11217 842 aa14.84□□□□□ -0.03
SHROOM1-203ENST00000378679 FLT3LGP49771 235 aa14.84□□□□□ -0.03
SHROOM1-203ENST00000378679 SPATS2Q86XZ4 545 aaKnown RBP14.84□□□□□ -0.03
SHROOM1-203ENST00000378679 PPTC7Q8NI37 304 aa14.84□□□□□ -0.03
SHROOM1-203ENST00000378679 FAM172AQ8WUF8 416 aa14.84□□□□□ -0.03
SHROOM1-203ENST00000378679 ZNF512Q96ME7 567 aaPredicted RBP14.84□□□□□ -0.03
SHROOM1-203ENST00000378679 ANKZF1Q9H8Y5 726 aa14.84□□□□□ -0.03
SHROOM1-203ENST00000378679 CD248Q9HCU0 757 aa14.84□□□□□ -0.03
SHROOM1-203ENST00000378679 ZNF112Q9UJU3 913 aa14.84□□□□□ -0.03
SHROOM1-203ENST00000378679 PDE2AO00408 941 aaPredicted RBP14.84□□□□□ -0.03
SHROOM1-203ENST00000378679 RPLP2P05387 115 aaKnown RBP14.84□□□□□ -0.03
SHROOM1-203ENST00000378679 IRAK1P51617 712 aa14.84□□□□□ -0.03
SHROOM1-203ENST00000378679 LRRC14Q15048 493 aa14.84□□□□□ -0.03
SHROOM1-203ENST00000378679 RAB3IL1Q8TBN0 382 aa14.84□□□□□ -0.03
SHROOM1-203ENST00000378679 PDCD6IPQ8WUM4 868 aaKnown RBP14.84□□□□□ -0.03
SHROOM1-203ENST00000378679 KRT35Q92764 455 aa14.84□□□□□ -0.03
SHROOM1-203ENST00000378679 STMN2Q93045 179 aa14.84□□□□□ -0.03
SHROOM1-203ENST00000378679 ELAC2Q9BQ52 826 aaKnown RBP14.84□□□□□ -0.03
SHROOM1-203ENST00000378679 ST6GALNAC4Q9H4F1 302 aa14.84□□□□□ -0.03
SHROOM1-203ENST00000378679 PCDHB7Q9Y5E2 793 aa14.84□□□□□ -0.03
SHROOM1-203ENST00000378679 KPNA7A9QM74 516 aa14.83□□□□□ -0.03
SHROOM1-203ENST00000378679 COPEO14579 308 aa14.83□□□□□ -0.03
SHROOM1-203ENST00000378679 GSTA1P08263 222 aa14.83□□□□□ -0.03
SHROOM1-203ENST00000378679 GSTA2P09210 222 aa14.83□□□□□ -0.03
SHROOM1-203ENST00000378679 SPARCL1Q14515 664 aa14.83□□□□□ -0.03
SHROOM1-203ENST00000378679 SLC29A2Q14542 456 aa14.83□□□□□ -0.03
SHROOM1-203ENST00000378679 NXNQ6DKJ4 435 aa14.83□□□□□ -0.03
SHROOM1-203ENST00000378679 MCUQ8NE86 351 aa14.83□□□□□ -0.03
SHROOM1-203ENST00000378679 LRRC15Q8TF66 581 aa14.83□□□□□ -0.03
SHROOM1-203ENST00000378679 NIFKQ9BYG3 293 aaKnown RBP14.83□□□□□ -0.03
SHROOM1-203ENST00000378679 SMYD3Q9H7B4 428 aa14.83□□□□□ -0.03
SHROOM1-203ENST00000378679 TXNRD2Q9NNW7 524 aa14.83□□□□□ -0.03
SHROOM1-203ENST00000378679 TJP2Q9UDY2 1190 aa14.83□□□□□ -0.03
SHROOM1-203ENST00000378679 PLCH1Q4KWH8 1693 aa14.83□□□□□ -0.04
SHROOM1-203ENST00000378679 MYH13Q9UKX3 1938 aa14.83□□□□□ -0.04
SHROOM1-203ENST00000378679 EEF2KO00418 725 aaKnown RBP14.83□□□□□ -0.04
SHROOM1-203ENST00000378679 ZBTB48P10074 688 aaPredicted RBP14.83□□□□□ -0.04
SHROOM1-203ENST00000378679 MX2P20592 715 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms