RNA–Protein interactions for RNA: ENST00000378676.1

SHROOM1-202, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-202ENST00000378676 RXFP1Q9HBX9 757 aa20.53■□□□□ 0.88
SHROOM1-202ENST00000378676 CLUHO75153 1309 aa20.52■□□□□ 0.88
SHROOM1-202ENST00000378676 LTBP3Q9NS15 1303 aa20.52■□□□□ 0.88
SHROOM1-202ENST00000378676 IGF2BP3O00425 579 aaKnown RBP eCLIP20.52■□□□□ 0.88
SHROOM1-202ENST00000378676 KIF1CO43896 1103 aaKnown RBP20.52■□□□□ 0.88
SHROOM1-202ENST00000378676 CD48P09326 243 aa20.52■□□□□ 0.88
SHROOM1-202ENST00000378676 IBSPP21815 317 aaPredicted RBP20.52■□□□□ 0.88
SHROOM1-202ENST00000378676 PROZP22891 400 aa20.52■□□□□ 0.88
SHROOM1-202ENST00000378676 EFTUD2Q15029 972 aaKnown RBP eCLIP20.52■□□□□ 0.882e-7■■■■■ 38.2
SHROOM1-202ENST00000378676 WLSQ5T9L3 541 aa20.52■□□□□ 0.88
SHROOM1-202ENST00000378676 NCAPG2Q86XI2 1143 aa20.52■□□□□ 0.88
SHROOM1-202ENST00000378676 CEP57Q86XR8 500 aa20.52■□□□□ 0.88
SHROOM1-202ENST00000378676 RIOX2Q8IUF8 465 aa20.52■□□□□ 0.88
SHROOM1-202ENST00000378676 KIF2BQ8N4N8 673 aa20.52■□□□□ 0.88
SHROOM1-202ENST00000378676 EMC1Q8N766 993 aa20.52■□□□□ 0.88
SHROOM1-202ENST00000378676 MAGEC3Q8TD91 643 aa20.52■□□□□ 0.88
SHROOM1-202ENST00000378676 THOC1Q96FV9 657 aaKnown RBP20.52■□□□□ 0.88
SHROOM1-202ENST00000378676 DONSONQ9NYP3 566 aa20.52■□□□□ 0.88
SHROOM1-202ENST00000378676 TRIM33Q9UPN9 1127 aa20.52■□□□□ 0.88
SHROOM1-202ENST00000378676 CEP83Q9Y592 693 aa20.52■□□□□ 0.88
SHROOM1-202ENST00000378676 ZSWIM8A7E2V4 1837 aa20.52■□□□□ 0.88
SHROOM1-202ENST00000378676 PRPF4O43172 522 aaKnown RBP eCLIP20.52■□□□□ 0.88
SHROOM1-202ENST00000378676 KRT15P19012 456 aa20.52■□□□□ 0.88
SHROOM1-202ENST00000378676 LACTBP83111 547 aaPredicted RBP20.52■□□□□ 0.88
SHROOM1-202ENST00000378676 NR1H3Q13133 447 aa20.52■□□□□ 0.88
SHROOM1-202ENST00000378676 HSDL1Q3SXM5 330 aa20.52■□□□□ 0.88
SHROOM1-202ENST00000378676 CENPUQ71F23 418 aa20.52■□□□□ 0.88
SHROOM1-202ENST00000378676 POLNQ7Z5Q5 900 aa20.52■□□□□ 0.88
SHROOM1-202ENST00000378676 RHPN2Q8IUC4 686 aa20.52■□□□□ 0.88
SHROOM1-202ENST00000378676 TAB3Q8N5C8 712 aaPredicted RBP20.52■□□□□ 0.88
SHROOM1-202ENST00000378676 WDR83Q9BRX9 315 aaKnown RBP20.52■□□□□ 0.88
SHROOM1-202ENST00000378676 SDCBP2Q9H190 292 aa20.52■□□□□ 0.88
SHROOM1-202ENST00000378676 AGTPBP1Q9UPW5 1226 aa20.52■□□□□ 0.88
SHROOM1-202ENST00000378676 A0A1W2PPM1 405 aa20.51■□□□□ 0.87
SHROOM1-202ENST00000378676 CLGNO14967 610 aa20.51■□□□□ 0.87
SHROOM1-202ENST00000378676 CDH8P55286 799 aa20.51■□□□□ 0.87
SHROOM1-202ENST00000378676 DNAJC3Q13217 504 aa20.51■□□□□ 0.87
SHROOM1-202ENST00000378676 VGLL4Q14135 290 aa20.51■□□□□ 0.87
SHROOM1-202ENST00000378676 MSS51Q4VC12 460 aa20.51■□□□□ 0.87
SHROOM1-202ENST00000378676 MPZL3Q6UWV2 235 aa20.51■□□□□ 0.87
SHROOM1-202ENST00000378676 CPXM1Q96SM3 734 aa20.51■□□□□ 0.87
SHROOM1-202ENST00000378676 PITPNM3Q9BZ71 974 aa20.51■□□□□ 0.87
SHROOM1-202ENST00000378676 PTPRHQ9HD43 1115 aa20.51■□□□□ 0.87
SHROOM1-202ENST00000378676 UBN1Q9NPG3 1134 aa20.51■□□□□ 0.87
SHROOM1-202ENST00000378676 METTL5Q9NRN9 209 aaKnown RBP20.51■□□□□ 0.87
SHROOM1-202ENST00000378676 HMGXB4Q9UGU5 601 aa20.51■□□□□ 0.87
SHROOM1-202ENST00000378676 CST8O60676 142 aa20.51■□□□□ 0.87
SHROOM1-202ENST00000378676 KRT3P12035 628 aa20.51■□□□□ 0.87
SHROOM1-202ENST00000378676 RPA3P35244 121 aaPredicted RBP20.51■□□□□ 0.87
SHROOM1-202ENST00000378676 CTCFP49711 727 aaPredicted RBP20.51■□□□□ 0.87
SHROOM1-202ENST00000378676 SURF1Q15526 300 aa20.51■□□□□ 0.87
SHROOM1-202ENST00000378676 RNF43Q68DV7 783 aa20.51■□□□□ 0.87
SHROOM1-202ENST00000378676 CPT1BQ92523 772 aa20.51■□□□□ 0.87
SHROOM1-202ENST00000378676 FAM167AQ96KS9 214 aa20.51■□□□□ 0.87
SHROOM1-202ENST00000378676 NLRP4Q96MN2 994 aa20.51■□□□□ 0.87
SHROOM1-202ENST00000378676 GPR20Q99678 358 aa20.51■□□□□ 0.87
SHROOM1-202ENST00000378676 STRIP2Q9ULQ0 834 aa20.51■□□□□ 0.87
SHROOM1-202ENST00000378676 IGKV6-21A0A0C4DH24 114 aa20.5■□□□□ 0.87
SHROOM1-202ENST00000378676 SIGLEC16A6NMB1 481 aa20.5■□□□□ 0.87
SHROOM1-202ENST00000378676 USP2O75604 605 aaPredicted RBP20.5■□□□□ 0.87
SHROOM1-202ENST00000378676 PIAS1O75925 651 aa20.5■□□□□ 0.87
SHROOM1-202ENST00000378676 TNNC2P02585 160 aa20.5■□□□□ 0.87
SHROOM1-202ENST00000378676 CXCL8P10145 99 aa20.5■□□□□ 0.87
SHROOM1-202ENST00000378676 PSMC1P62191 440 aaKnown RBP20.5■□□□□ 0.87
SHROOM1-202ENST00000378676 SLC1A5Q15758 541 aa20.5■□□□□ 0.87
SHROOM1-202ENST00000378676 HIF1AQ16665 826 aa20.5■□□□□ 0.87
SHROOM1-202ENST00000378676 FNBP1LQ5T0N5 605 aa20.5■□□□□ 0.87
SHROOM1-202ENST00000378676 ATF7IP2Q5U623 682 aa20.5■□□□□ 0.87
SHROOM1-202ENST00000378676 GBP7Q8N8V2 638 aaPredicted RBP20.5■□□□□ 0.87
SHROOM1-202ENST00000378676 TWNKQ96RR1 684 aa20.5■□□□□ 0.87
SHROOM1-202ENST00000378676 SPATC1LQ9H0A9 340 aa20.5■□□□□ 0.87
SHROOM1-202ENST00000378676 SLCO1B3Q9NPD5 702 aa20.5■□□□□ 0.87
SHROOM1-202ENST00000378676 SIX4Q9UIU6 781 aa20.5■□□□□ 0.87
SHROOM1-202ENST00000378676 ERBB2P04626 1255 aa20.5■□□□□ 0.87
SHROOM1-202ENST00000378676 KRT19P08727 400 aa20.5■□□□□ 0.87
SHROOM1-202ENST00000378676 KRT16P08779 473 aa20.5■□□□□ 0.87
SHROOM1-202ENST00000378676 RAD23BP54727 409 aa20.5■□□□□ 0.87
SHROOM1-202ENST00000378676 YWHAEP62258 255 aaKnown RBP20.5■□□□□ 0.87
SHROOM1-202ENST00000378676 MTM1Q13496 603 aa20.5■□□□□ 0.87
SHROOM1-202ENST00000378676 ACVR2BQ13705 512 aa20.5■□□□□ 0.87
SHROOM1-202ENST00000378676 MXD4Q14582 209 aaPredicted RBP20.5■□□□□ 0.87
SHROOM1-202ENST00000378676 TAF5Q15542 800 aa20.5■□□□□ 0.87
SHROOM1-202ENST00000378676 EFHC2Q5JST6 749 aa20.5■□□□□ 0.87
SHROOM1-202ENST00000378676 TSHZ1Q6ZSZ6 1077 aa20.5■□□□□ 0.87
SHROOM1-202ENST00000378676 BBS12Q6ZW61 710 aa20.5■□□□□ 0.87
SHROOM1-202ENST00000378676 ANKRD36BP1Q96IX9 119 aa20.5■□□□□ 0.87
SHROOM1-202ENST00000378676 PLCD4Q9BRC7 762 aa20.5■□□□□ 0.87
SHROOM1-202ENST00000378676 MAK16Q9BXY0 300 aaKnown RBP20.5■□□□□ 0.87
SHROOM1-202ENST00000378676 KLHL14Q9P2G3 628 aa20.5■□□□□ 0.87
SHROOM1-202ENST00000378676 TCRBV7S3A2A0A539 114 aa20.49■□□□□ 0.87
SHROOM1-202ENST00000378676 B4GALT4O60513 344 aa20.49■□□□□ 0.87
SHROOM1-202ENST00000378676 KDELR1P24390 212 aa20.49■□□□□ 0.87
SHROOM1-202ENST00000378676 SSTR1P30872 391 aa20.49■□□□□ 0.87
SHROOM1-202ENST00000378676 XYLT1Q86Y38 959 aa20.49■□□□□ 0.87
SHROOM1-202ENST00000378676 NLGN2Q8NFZ4 835 aa20.49■□□□□ 0.87
SHROOM1-202ENST00000378676 KLHL29Q96CT2 875 aa20.49■□□□□ 0.87
SHROOM1-202ENST00000378676 TBC1D31Q96DN5 1066 aa20.49■□□□□ 0.87
SHROOM1-202ENST00000378676 SMC6Q96SB8 1091 aa20.49■□□□□ 0.87
SHROOM1-202ENST00000378676 CDT1Q9H211 546 aa20.49■□□□□ 0.87
SHROOM1-202ENST00000378676 SMYD3Q9H7B4 428 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms