RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 TRPC4Q9UBN4 977 aa14.66□□□□□ -0.06
TRIM13-202ENST00000378182 CNTNAP2Q9UHC6 1331 aa14.66□□□□□ -0.06
TRIM13-202ENST00000378182 SLC12A8A0AV02 714 aa14.66□□□□□ -0.06
TRIM13-202ENST00000378182 AP3B1O00203 1094 aa14.66□□□□□ -0.06
TRIM13-202ENST00000378182 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.66□□□□□ -0.06
TRIM13-202ENST00000378182 ATXN3LQ9H3M9 355 aa14.66□□□□□ -0.06
TRIM13-202ENST00000378182 GNG14A0A1W2PPG7 69 aa14.66□□□□□ -0.06
TRIM13-202ENST00000378182 FAM107AO95990 144 aa14.66□□□□□ -0.06
TRIM13-202ENST00000378182 PPP2R2AP63151 447 aa14.66□□□□□ -0.06
TRIM13-202ENST00000378182 CLIP3Q96DZ5 547 aa14.66□□□□□ -0.06
TRIM13-202ENST00000378182 RNPC3Q96LT9 517 aaKnown RBP14.66□□□□□ -0.06
TRIM13-202ENST00000378182 ADGRL2O95490 1459 aa14.66□□□□□ -0.06
TRIM13-202ENST00000378182 ZNF200P98182 395 aaPredicted RBP14.66□□□□□ -0.06
TRIM13-202ENST00000378182 C16orf59Q7L2K0 433 aa14.66□□□□□ -0.06
TRIM13-202ENST00000378182 PPP1R13LQ8WUF5 828 aa14.66□□□□□ -0.06
TRIM13-202ENST00000378182 IPCEF1Q8WWN9 437 aaPredicted RBP14.66□□□□□ -0.06
TRIM13-202ENST00000378182 ACTR5Q9H9F9 607 aaPredicted RBP14.66□□□□□ -0.06
TRIM13-202ENST00000378182 CRB1P82279 1406 aa14.66□□□□□ -0.06
TRIM13-202ENST00000378182 MOXD2PA6NHM9 499 aa14.66□□□□□ -0.06
TRIM13-202ENST00000378182 PARNO95453 639 aaKnown RBP14.66□□□□□ -0.06
TRIM13-202ENST00000378182 IGKV5-2P06315 115 aa14.66□□□□□ -0.06
TRIM13-202ENST00000378182 CTSEP14091 401 aa14.66□□□□□ -0.06
TRIM13-202ENST00000378182 CLCN6P51797 869 aa14.66□□□□□ -0.06
TRIM13-202ENST00000378182 MROH9Q5TGP6 573 aa14.66□□□□□ -0.06
TRIM13-202ENST00000378182 C3orf62Q6ZUJ4 267 aa14.66□□□□□ -0.06
TRIM13-202ENST00000378182 ADGRF2Q8IZF7 708 aa14.66□□□□□ -0.06
TRIM13-202ENST00000378182 C4orf33Q8N1A6 199 aa14.66□□□□□ -0.06
TRIM13-202ENST00000378182 CALR3Q96L12 384 aaKnown RBP14.66□□□□□ -0.06
TRIM13-202ENST00000378182 ECSITQ9BQ95 431 aa14.66□□□□□ -0.06
TRIM13-202ENST00000378182 SMPD4Q9NXE4 827 aa14.66□□□□□ -0.06
TRIM13-202ENST00000378182 HECW2Q9P2P5 1572 aa14.66□□□□□ -0.06
TRIM13-202ENST00000378182 IFRD1O00458 451 aaPredicted RBP14.65□□□□□ -0.06
TRIM13-202ENST00000378182 RFC5P40937 340 aa14.65□□□□□ -0.06
TRIM13-202ENST00000378182 KCNK10P57789 538 aa14.65□□□□□ -0.06
TRIM13-202ENST00000378182 RABGAP1LQ5R372 815 aa14.65□□□□□ -0.06
TRIM13-202ENST00000378182 CAPRIN2Q6IMN6 1127 aaKnown RBP14.65□□□□□ -0.06
TRIM13-202ENST00000378182 BBS7Q8IWZ6 715 aa14.65□□□□□ -0.06
TRIM13-202ENST00000378182 DNAJC1Q96KC8 554 aaKnown RBP14.65□□□□□ -0.06
TRIM13-202ENST00000378182 TRABDQ9H4I3 376 aa14.65□□□□□ -0.06
TRIM13-202ENST00000378182 LNPEPQ9UIQ6 1025 aa14.65□□□□□ -0.06
TRIM13-202ENST00000378182 RUVBL2Q9Y230 463 aaKnown RBP14.65□□□□□ -0.06
TRIM13-202ENST00000378182 POLBP06746 335 aa14.65□□□□□ -0.06
TRIM13-202ENST00000378182 CLCN3P51790 818 aa14.65□□□□□ -0.06
TRIM13-202ENST00000378182 SPIRE2Q8WWL2 714 aa14.65□□□□□ -0.06
TRIM13-202ENST00000378182 TSC22D3Q99576 134 aa14.65□□□□□ -0.06
TRIM13-202ENST00000378182 THUMPD3Q9BV44 507 aaKnown RBP14.65□□□□□ -0.06
TRIM13-202ENST00000378182 RHBGQ9H310 441 aa14.65□□□□□ -0.06
TRIM13-202ENST00000378182 LINC00854A0A1B0GVQ3 168 aa14.65□□□□□ -0.06
TRIM13-202ENST00000378182 PGM1P36871 562 aa14.65□□□□□ -0.06
TRIM13-202ENST00000378182 BTG3Q14201 252 aaPredicted RBP14.65□□□□□ -0.06
TRIM13-202ENST00000378182 PDK1Q15118 436 aa14.65□□□□□ -0.06
TRIM13-202ENST00000378182 NECTIN1Q15223 517 aa14.65□□□□□ -0.06
TRIM13-202ENST00000378182 ICE2Q659A1 982 aa14.65□□□□□ -0.06
TRIM13-202ENST00000378182 RIN2Q8WYP3 895 aaPredicted RBP14.65□□□□□ -0.06
TRIM13-202ENST00000378182 TARS2Q9BW92 718 aaKnown RBP14.65□□□□□ -0.06
TRIM13-202ENST00000378182 ADARB2Q9NS39 739 aaKnown RBP14.65□□□□□ -0.06
TRIM13-202ENST00000378182 NCKAP1Q9Y2A7 1128 aa14.65□□□□□ -0.06
TRIM13-202ENST00000378182 MTFR1Q15390 333 aa14.65□□□□□ -0.06
TRIM13-202ENST00000378182 EFHC1Q5JVL4 640 aa14.65□□□□□ -0.06
TRIM13-202ENST00000378182 NSUN4Q96CB9 384 aaKnown RBP14.65□□□□□ -0.06
TRIM13-202ENST00000378182 TUBE1Q9UJT0 475 aa14.65□□□□□ -0.06
TRIM13-202ENST00000378182 EXTL3O43909 919 aa14.65□□□□□ -0.06
TRIM13-202ENST00000378182 GYS1P13807 737 aa14.65□□□□□ -0.06
TRIM13-202ENST00000378182 CYP2C19P33261 490 aa14.65□□□□□ -0.06
TRIM13-202ENST00000378182 FOXO4P98177 505 aa14.65□□□□□ -0.06
TRIM13-202ENST00000378182 ZNF543Q08ER8 600 aa14.65□□□□□ -0.06
TRIM13-202ENST00000378182 MIIPQ5JXC2 388 aa14.65□□□□□ -0.06
TRIM13-202ENST00000378182 C12orf60Q5U649 245 aa14.65□□□□□ -0.06
TRIM13-202ENST00000378182 MXRA8Q9BRK3 442 aa14.65□□□□□ -0.06
TRIM13-202ENST00000378182 MRFAP1Q9Y605 127 aa14.65□□□□□ -0.06
TRIM13-202ENST00000378182 GJB7Q6PEY0 223 aa14.65□□□□□ -0.06
TRIM13-202ENST00000378182 BTN2A1Q7KYR7 527 aa14.65□□□□□ -0.06
TRIM13-202ENST00000378182 UNKQ9C0B0 810 aaKnown RBP14.65□□□□□ -0.06
TRIM13-202ENST00000378182 VCPKMTQ9H867 229 aa14.65□□□□□ -0.06
TRIM13-202ENST00000378182 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.65□□□□□ -0.065e-8■■□□□ 12
TRIM13-202ENST00000378182 AKAP7Q9P0M2 348 aaPredicted RBP14.65□□□□□ -0.06
TRIM13-202ENST00000378182 ZCCHC11Q5TAX3 1644 aaKnown RBP14.65□□□□□ -0.07
TRIM13-202ENST00000378182 CCDC22O60826 627 aa14.64□□□□□ -0.07
TRIM13-202ENST00000378182 RHOCP08134 193 aa14.64□□□□□ -0.07
TRIM13-202ENST00000378182 DSG3P32926 999 aa14.64□□□□□ -0.07
TRIM13-202ENST00000378182 PCYT1AP49585 367 aa14.64□□□□□ -0.07
TRIM13-202ENST00000378182 PTK7Q13308 1070 aa14.64□□□□□ -0.07
TRIM13-202ENST00000378182 CYP51A1Q16850 503 aa14.64□□□□□ -0.07
TRIM13-202ENST00000378182 KLF6Q99612 283 aaPredicted RBP14.64□□□□□ -0.07
TRIM13-202ENST00000378182 PRPF18Q99633 342 aaKnown RBP14.64□□□□□ -0.07
TRIM13-202ENST00000378182 MSRAQ9UJ68 235 aa14.64□□□□□ -0.07
TRIM13-202ENST00000378182 CHURC1-FNTBB4DL54 471 aa14.64□□□□□ -0.07
TRIM13-202ENST00000378182 FNTAP49354 379 aa14.64□□□□□ -0.07
TRIM13-202ENST00000378182 PRKAA1Q13131 559 aa14.64□□□□□ -0.07
TRIM13-202ENST00000378182 STX3Q13277 289 aa14.64□□□□□ -0.07
TRIM13-202ENST00000378182 PTK6Q13882 451 aa14.64□□□□□ -0.07
TRIM13-202ENST00000378182 E2F4Q16254 413 aa14.64□□□□□ -0.07
TRIM13-202ENST00000378182 EMILIN2Q9BXX0 1053 aa14.64□□□□□ -0.07
TRIM13-202ENST00000378182 MTMR12Q9C0I1 747 aa14.64□□□□□ -0.07
TRIM13-202ENST00000378182 PDGFDQ9GZP0 370 aaPredicted RBP14.64□□□□□ -0.07
TRIM13-202ENST00000378182 TAF1DQ9H5J8 278 aaPredicted RBP14.64□□□□□ -0.07
TRIM13-202ENST00000378182 SPATS2LQ9NUQ6 558 aaKnown RBP14.64□□□□□ -0.07
TRIM13-202ENST00000378182 SOHLH2Q9NX45 425 aa14.64□□□□□ -0.07
TRIM13-202ENST00000378182 NEU2Q9Y3R4 380 aa14.64□□□□□ -0.07
TRIM13-202ENST00000378182 APOA1P02647 267 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms