RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 PIAS4Q8N2W9 510 aaPredicted RBP12.27□□□□□ -0.45
NPHP4-202ENST00000378161 MYCT1Q8N699 235 aa12.27□□□□□ -0.45
NPHP4-202ENST00000378161 ZNF512BQ96KM6 892 aaPredicted RBP12.27□□□□□ -0.45
NPHP4-202ENST00000378161 TRABDQ9H4I3 376 aa12.27□□□□□ -0.45
NPHP4-202ENST00000378161 IP6K2Q9UHH9 426 aa12.27□□□□□ -0.45
NPHP4-202ENST00000378161 ANAPC5Q9UJX4 755 aa12.27□□□□□ -0.45
NPHP4-202ENST00000378161 A0A0G2JLW4 131 aa12.27□□□□□ -0.45
NPHP4-202ENST00000378161 LRRC53A6NM62 1247 aa12.27□□□□□ -0.45
NPHP4-202ENST00000378161 F8W8V4 182 aa12.27□□□□□ -0.45
NPHP4-202ENST00000378161 ECE2O60344 883 aa12.27□□□□□ -0.45
NPHP4-202ENST00000378161 BMP10O95393 424 aa12.27□□□□□ -0.45
NPHP4-202ENST00000378161 CALB1P05937 261 aa12.27□□□□□ -0.45
NPHP4-202ENST00000378161 VCPP55072 806 aaKnown RBP12.27□□□□□ -0.45
NPHP4-202ENST00000378161 PTPAQ15257 358 aa12.27□□□□□ -0.45
NPHP4-202ENST00000378161 ATG14Q6ZNE5 492 aa12.27□□□□□ -0.45
NPHP4-202ENST00000378161 RIPOR1Q6ZS17 1223 aa12.27□□□□□ -0.45
NPHP4-202ENST00000378161 TMC4Q7Z404 712 aa12.27□□□□□ -0.45
NPHP4-202ENST00000378161 GRK7Q8WTQ7 553 aa12.27□□□□□ -0.45
NPHP4-202ENST00000378161 ANKRD49Q8WVL7 239 aa12.27□□□□□ -0.45
NPHP4-202ENST00000378161 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.27□□□□□ -0.45
NPHP4-202ENST00000378161 SIK3Q9Y2K2 1263 aa12.27□□□□□ -0.45
NPHP4-202ENST00000378161 REXO2Q9Y3B8 237 aaKnown RBP12.27□□□□□ -0.45
NPHP4-202ENST00000378161 TTLL1O95922 423 aa12.26□□□□□ -0.45
NPHP4-202ENST00000378161 ATF6P18850 670 aa12.26□□□□□ -0.45
NPHP4-202ENST00000378161 KRR1Q13601 381 aaKnown RBP12.26□□□□□ -0.45
NPHP4-202ENST00000378161 PPM1LQ5SGD2 360 aa12.26□□□□□ -0.45
NPHP4-202ENST00000378161 ATG16L1Q676U5 607 aa12.26□□□□□ -0.45
NPHP4-202ENST00000378161 TTC33Q6PID6 262 aaPredicted RBP12.26□□□□□ -0.45
NPHP4-202ENST00000378161 ADCK1Q86TW2 530 aa12.26□□□□□ -0.45
NPHP4-202ENST00000378161 ALLCQ8N6M5 410 aa12.26□□□□□ -0.45
NPHP4-202ENST00000378161 POU5F2Q8N7G0 328 aa12.26□□□□□ -0.45
NPHP4-202ENST00000378161 FAM136AQ96C01 138 aa12.26□□□□□ -0.45
NPHP4-202ENST00000378161 KCNK16Q96T55 309 aa12.26□□□□□ -0.45
NPHP4-202ENST00000378161 PHF20Q9BVI0 1012 aa12.26□□□□□ -0.45
NPHP4-202ENST00000378161 TSSK1BQ9BXA7 367 aa12.26□□□□□ -0.45
NPHP4-202ENST00000378161 ARHGAP26Q9UNA1 814 aa12.26□□□□□ -0.45
NPHP4-202ENST00000378161 CLTCQ00610 1675 aaKnown RBP12.26□□□□□ -0.45
NPHP4-202ENST00000378161 ZNF804BA4D1E1 1349 aa12.26□□□□□ -0.45
NPHP4-202ENST00000378161 LOC102724428A0A0B4J2F2 783 aa12.26□□□□□ -0.45
NPHP4-202ENST00000378161 ARHGEF35A5YM69 484 aa12.26□□□□□ -0.45
NPHP4-202ENST00000378161 hCG_1984214I3L0E3 225 aa12.26□□□□□ -0.45
NPHP4-202ENST00000378161 APOL1O14791 398 aa12.26□□□□□ -0.45
NPHP4-202ENST00000378161 SRGNP10124 158 aa12.26□□□□□ -0.45
NPHP4-202ENST00000378161 SIK1P57059 783 aa12.26□□□□□ -0.45
NPHP4-202ENST00000378161 POU5F1Q01860 360 aaKnown RBP12.26□□□□□ -0.45
NPHP4-202ENST00000378161 MAP3K10Q02779 954 aa12.26□□□□□ -0.45
NPHP4-202ENST00000378161 UTS2BQ765I0 119 aa12.26□□□□□ -0.45
NPHP4-202ENST00000378161 SYNE4Q8N205 404 aa12.26□□□□□ -0.45
NPHP4-202ENST00000378161 FBXL16Q8N461 479 aa12.26□□□□□ -0.45
NPHP4-202ENST00000378161 CCDC24Q8N4L8 307 aa12.26□□□□□ -0.45
NPHP4-202ENST00000378161 PYDC1Q8WXC3 89 aa12.26□□□□□ -0.45
NPHP4-202ENST00000378161 TRPV6Q9H1D0 765 aa12.26□□□□□ -0.45
NPHP4-202ENST00000378161 IPPQ9Y573 584 aa12.26□□□□□ -0.45
NPHP4-202ENST00000378161 A0A087WXM4 84 aa12.26□□□□□ -0.45
NPHP4-202ENST00000378161 H3BNX3 289 aa12.26□□□□□ -0.45
NPHP4-202ENST00000378161 SNPHO15079 494 aa12.26□□□□□ -0.45
NPHP4-202ENST00000378161 USP1O94782 785 aa12.26□□□□□ -0.45
NPHP4-202ENST00000378161 ABCB4P21439 1286 aa12.26□□□□□ -0.45
NPHP4-202ENST00000378161 CRKLP46109 303 aaKnown RBP12.26□□□□□ -0.45
NPHP4-202ENST00000378161 STAT4Q14765 748 aa12.26□□□□□ -0.45
NPHP4-202ENST00000378161 RFWD3Q6PCD5 774 aa12.26□□□□□ -0.45
NPHP4-202ENST00000378161 POTEAQ6S8J7 498 aa12.26□□□□□ -0.45
NPHP4-202ENST00000378161 SLFN12Q8IYM2 578 aa12.26□□□□□ -0.45
NPHP4-202ENST00000378161 NEDD1Q8NHV4 660 aa12.26□□□□□ -0.45
NPHP4-202ENST00000378161 KRT35Q92764 455 aa12.26□□□□□ -0.45
NPHP4-202ENST00000378161 BTBD9Q96Q07 612 aa12.26□□□□□ -0.45
NPHP4-202ENST00000378161 PRM3Q9NNZ6 103 aa12.26□□□□□ -0.45
NPHP4-202ENST00000378161 CRNNQ9UBG3 495 aaPredicted RBP12.26□□□□□ -0.45
NPHP4-202ENST00000378161 SQORQ9Y6N5 450 aa12.26□□□□□ -0.45
NPHP4-202ENST00000378161 NUDT17P0C025 328 aa12.25□□□□□ -0.45
NPHP4-202ENST00000378161 RPA1P27694 616 aa12.25□□□□□ -0.45
NPHP4-202ENST00000378161 CHRNA3P32297 505 aa12.25□□□□□ -0.45
NPHP4-202ENST00000378161 TRADDQ15628 312 aa12.25□□□□□ -0.45
NPHP4-202ENST00000378161 KCNJ8Q15842 424 aa12.25□□□□□ -0.45
NPHP4-202ENST00000378161 KLHDC7AQ5VTJ3 777 aa12.25□□□□□ -0.45
NPHP4-202ENST00000378161 SIGIRRQ6IA17 410 aa12.25□□□□□ -0.45
NPHP4-202ENST00000378161 PPP4R4Q6NUP7 873 aa12.25□□□□□ -0.45
NPHP4-202ENST00000378161 ITIH5Q86UX2 942 aa12.25□□□□□ -0.45
NPHP4-202ENST00000378161 DNAJC5Q9H3Z4 198 aa12.25□□□□□ -0.45
NPHP4-202ENST00000378161 JMJD4Q9H9V9 463 aa12.25□□□□□ -0.45
NPHP4-202ENST00000378161 VANGL2Q9ULK5 521 aa12.25□□□□□ -0.45
NPHP4-202ENST00000378161 SNAP23O00161 211 aa12.25□□□□□ -0.45
NPHP4-202ENST00000378161 NR2F2P24468 414 aa12.25□□□□□ -0.45
NPHP4-202ENST00000378161 ADSLP30566 484 aaPredicted RBP12.25□□□□□ -0.45
NPHP4-202ENST00000378161 GPD2P43304 727 aa12.25□□□□□ -0.45
NPHP4-202ENST00000378161 FAM122CQ6P4D5 195 aa12.25□□□□□ -0.45
NPHP4-202ENST00000378161 DGLUCYQ7Z3D6 616 aa12.25□□□□□ -0.45
NPHP4-202ENST00000378161 ZNF786Q8N393 782 aa12.25□□□□□ -0.45
NPHP4-202ENST00000378161 HSD3B7Q9H2F3 369 aa12.25□□□□□ -0.45
NPHP4-202ENST00000378161 TLK1Q9UKI8 766 aa12.25□□□□□ -0.45
NPHP4-202ENST00000378161 IFT52Q9Y366 437 aa12.25□□□□□ -0.45
NPHP4-202ENST00000378161 H3BSA7 217 aa12.25□□□□□ -0.45
NPHP4-202ENST00000378161 SERPINH1P50454 418 aaKnown RBP12.25□□□□□ -0.45
NPHP4-202ENST00000378161 NIPAL4Q0D2K0 466 aa12.25□□□□□ -0.45
NPHP4-202ENST00000378161 DPYDQ12882 1025 aa12.25□□□□□ -0.45
NPHP4-202ENST00000378161 LAMC2Q13753 1193 aa12.25□□□□□ -0.45
NPHP4-202ENST00000378161 TRIM25Q14258 630 aaKnown RBP12.25□□□□□ -0.45
NPHP4-202ENST00000378161 TRAPPC3LQ5T215 181 aa12.25□□□□□ -0.45
NPHP4-202ENST00000378161 ZCCHC8Q6NZY4 707 aaKnown RBP12.25□□□□□ -0.45
NPHP4-202ENST00000378161 FAM117BQ6P1L5 589 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms