RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 GPC2Q8N158 579 aa15.68■□□□□ 0.1
NPHP4-201ENST00000378156 CERS5Q8N5B7 392 aa15.68■□□□□ 0.1
NPHP4-201ENST00000378156 ASAP3Q8TDY4 903 aa15.68■□□□□ 0.1
NPHP4-201ENST00000378156 DNAJC19Q96DA6 116 aa15.68■□□□□ 0.1
NPHP4-201ENST00000378156 ERP27Q96DN0 273 aa15.68■□□□□ 0.1
NPHP4-201ENST00000378156 LBHD1Q9BQE6 289 aaPredicted RBP15.68■□□□□ 0.1
NPHP4-201ENST00000378156 METTL5Q9NRN9 209 aaKnown RBP15.68■□□□□ 0.1
NPHP4-201ENST00000378156 PSMC3IPQ9P2W1 217 aaPredicted RBP15.68■□□□□ 0.1
NPHP4-201ENST00000378156 SYNPO2Q9UMS6 1093 aa15.68■□□□□ 0.1
NPHP4-201ENST00000378156 E5RI56 91 aa15.68■□□□□ 0.1
NPHP4-201ENST00000378156 H3BRB1 525 aa15.68■□□□□ 0.1
NPHP4-201ENST00000378156 EEF2KO00418 725 aaKnown RBP15.68■□□□□ 0.1
NPHP4-201ENST00000378156 TM4SF1P30408 202 aa15.68■□□□□ 0.1
NPHP4-201ENST00000378156 CENPCQ03188 943 aa15.68■□□□□ 0.1
NPHP4-201ENST00000378156 KCNMA1Q12791 1236 aa15.68■□□□□ 0.1
NPHP4-201ENST00000378156 TEX9Q8N6V9 391 aa15.68■□□□□ 0.1
NPHP4-201ENST00000378156 SLC7A14Q8TBB6 771 aa15.68■□□□□ 0.1
NPHP4-201ENST00000378156 TUT1Q9H6E5 874 aaKnown RBP15.68■□□□□ 0.1
NPHP4-201ENST00000378156 SLC40A1Q9NP59 571 aa15.68■□□□□ 0.1
NPHP4-201ENST00000378156 ZC3H7BQ9UGR2 993 aaKnown RBP15.68■□□□□ 0.1
NPHP4-201ENST00000378156 AP3B1O00203 1094 aa15.67■□□□□ 0.1
NPHP4-201ENST00000378156 MYBL2P10244 700 aa15.67■□□□□ 0.1
NPHP4-201ENST00000378156 HNRNPH1P31943 449 aaKnown RBP15.67■□□□□ 0.1
NPHP4-201ENST00000378156 C3orf62Q6ZUJ4 267 aa15.67■□□□□ 0.1
NPHP4-201ENST00000378156 ZNF512Q96ME7 567 aaPredicted RBP15.67■□□□□ 0.1
NPHP4-201ENST00000378156 CGRRF1Q99675 332 aa15.67■□□□□ 0.1
NPHP4-201ENST00000378156 XPO7Q9UIA9 1087 aaKnown RBP15.67■□□□□ 0.1
NPHP4-201ENST00000378156 FGRP09769 529 aa15.67■□□□□ 0.1
NPHP4-201ENST00000378156 KIF19Q2TAC6 998 aa15.67■□□□□ 0.1
NPHP4-201ENST00000378156 RARS2Q5T160 578 aaKnown RBP15.67■□□□□ 0.1
NPHP4-201ENST00000378156 SLC5A5Q92911 643 aa15.67■□□□□ 0.1
NPHP4-201ENST00000378156 PAK5Q9P286 719 aa15.67■□□□□ 0.1
NPHP4-201ENST00000378156 KIAA1257Q9ULG3 409 aa15.67■□□□□ 0.1
NPHP4-201ENST00000378156 UBA6A0AVT1 1052 aaPredicted RBP15.67■□□□□ 0.1
NPHP4-201ENST00000378156 TMEM150BA6NC51 233 aa15.67■□□□□ 0.1
NPHP4-201ENST00000378156 ARHGEF9O43307 516 aa15.67■□□□□ 0.1
NPHP4-201ENST00000378156 VTNP04004 478 aa15.67■□□□□ 0.1
NPHP4-201ENST00000378156 HNRNPCP07910 306 aaKnown RBP eCLIP15.67■□□□□ 0.1
NPHP4-201ENST00000378156 CYP2C8P10632 490 aa15.67■□□□□ 0.1
NPHP4-201ENST00000378156 THPOP40225 353 aa15.67■□□□□ 0.1
NPHP4-201ENST00000378156 NEK2P51955 445 aa15.67■□□□□ 0.1
NPHP4-201ENST00000378156 CYP24A1Q07973 514 aa15.67■□□□□ 0.1
NPHP4-201ENST00000378156 NBPF20Q3BBV1 942 aa15.67■□□□□ 0.1
NPHP4-201ENST00000378156 KDELC2Q7Z4H8 507 aa15.67■□□□□ 0.1
NPHP4-201ENST00000378156 AGGF1Q8N302 714 aaeCLIP15.67■□□□□ 0.1
NPHP4-201ENST00000378156 P2RX7Q99572 595 aaKnown RBP15.67■□□□□ 0.1
NPHP4-201ENST00000378156 PRG3Q9Y2Y8 225 aaPredicted RBP15.67■□□□□ 0.1
NPHP4-201ENST00000378156 B3GAT3O94766 335 aa15.67■□□□□ 0.1
NPHP4-201ENST00000378156 KLC1Q07866 573 aa15.67■□□□□ 0.1
NPHP4-201ENST00000378156 HSD3B7Q9H2F3 369 aa15.67■□□□□ 0.1
NPHP4-201ENST00000378156 SEMA4AQ9H3S1 761 aa15.67■□□□□ 0.1
NPHP4-201ENST00000378156 SUFUQ9UMX1 484 aa15.67■□□□□ 0.1
NPHP4-201ENST00000378156 SYCE1LA8MT33 242 aa15.66■□□□□ 0.1
NPHP4-201ENST00000378156 HMBSP08397 361 aa15.66■□□□□ 0.1
NPHP4-201ENST00000378156 RARGP13631 454 aa15.66■□□□□ 0.1
NPHP4-201ENST00000378156 AARSP49588 968 aaKnown RBP eCLIP15.66■□□□□ 0.1
NPHP4-201ENST00000378156 PTENP60484 403 aa15.66■□□□□ 0.1
NPHP4-201ENST00000378156 MORF4L2Q15014 288 aa15.66■□□□□ 0.1
NPHP4-201ENST00000378156 MAP1SQ66K74 1059 aaPredicted RBP15.66■□□□□ 0.1
NPHP4-201ENST00000378156 SLC4A7Q9Y6M7 1214 aa15.66■□□□□ 0.1
NPHP4-201ENST00000378156 LOC102724159A0A0B4J2E5 919 aa15.66■□□□□ 0.1
NPHP4-201ENST00000378156 RNF103-CHMP3A0A140T963 221 aa15.66■□□□□ 0.1
NPHP4-201ENST00000378156 DIAPH2O60879 1101 aa15.66■□□□□ 0.1
NPHP4-201ENST00000378156 STAG3L1P0CL83 205 aa15.66■□□□□ 0.1
NPHP4-201ENST00000378156 MAPTP10636 758 aaKnown RBP15.66■□□□□ 0.1
NPHP4-201ENST00000378156 KRT33BQ14525 404 aa15.66■□□□□ 0.1
NPHP4-201ENST00000378156 PDK1Q15118 436 aa15.66■□□□□ 0.1
NPHP4-201ENST00000378156 PWP2Q15269 919 aaKnown RBP15.66■□□□□ 0.1
NPHP4-201ENST00000378156 CBWD6Q4V339 395 aa15.66■□□□□ 0.1
NPHP4-201ENST00000378156 CBWD3Q5JTY5 395 aa15.66■□□□□ 0.1
NPHP4-201ENST00000378156 CBWD5Q5RIA9 395 aa15.66■□□□□ 0.1
NPHP4-201ENST00000378156 MTHFD1LQ6UB35 978 aa15.66■□□□□ 0.1
NPHP4-201ENST00000378156 ARHGEF19Q8IW93 802 aa15.66■□□□□ 0.1
NPHP4-201ENST00000378156 ATPAF2Q8N5M1 289 aa15.66■□□□□ 0.1
NPHP4-201ENST00000378156 BAP1Q92560 729 aa15.66■□□□□ 0.1
NPHP4-201ENST00000378156 ZBTB18Q99592 522 aa15.66■□□□□ 0.1
NPHP4-201ENST00000378156 CPA4Q9UI42 421 aa15.66■□□□□ 0.1
NPHP4-201ENST00000378156 SLIT3O75094 1523 aa15.66■□□□□ 0.1
NPHP4-201ENST00000378156 MGAT5BQ3V5L5 792 aa15.66■□□□□ 0.1
NPHP4-201ENST00000378156 NT5DC3Q86UY8 548 aa15.66■□□□□ 0.1
NPHP4-201ENST00000378156 RNF135Q8IUD6 432 aa15.66■□□□□ 0.1
NPHP4-201ENST00000378156 ATXN7L3BQ96GX2 97 aa15.66■□□□□ 0.1
NPHP4-201ENST00000378156 SEPT5Q99719 369 aaPredicted RBP15.66■□□□□ 0.1
NPHP4-201ENST00000378156 MRC1P22897 1456 aa15.66■□□□□ 0.1
NPHP4-201ENST00000378156 A0A087WZ62 844 aa15.66■□□□□ 0.1
NPHP4-201ENST00000378156 DNAJC3Q13217 504 aa15.66■□□□□ 0.1
NPHP4-201ENST00000378156 ANO4Q32M45 955 aa15.66■□□□□ 0.1
NPHP4-201ENST00000378156 FASTKD1Q53R41 847 aaKnown RBP15.66■□□□□ 0.1
NPHP4-201ENST00000378156 FAM117BQ6P1L5 589 aa15.66■□□□□ 0.1
NPHP4-201ENST00000378156 ULK4Q96C45 1275 aa15.66■□□□□ 0.1
NPHP4-201ENST00000378156 PABPC5Q96DU9 382 aaKnown RBP15.66■□□□□ 0.1
NPHP4-201ENST00000378156 SERPINB12Q96P63 405 aa15.66■□□□□ 0.1
NPHP4-201ENST00000378156 FDXACB1Q9BRP7 624 aaPredicted RBP15.66■□□□□ 0.1
NPHP4-201ENST00000378156 TMEM106CQ9BVX2 250 aa15.66■□□□□ 0.1
NPHP4-201ENST00000378156 CDC42EP4Q9H3Q1 356 aaKnown RBP15.66■□□□□ 0.1
NPHP4-201ENST00000378156 PCDHGC5Q9Y5F6 944 aa15.66■□□□□ 0.1
NPHP4-201ENST00000378156 VDRP11473 427 aa15.65■□□□□ 0.1
NPHP4-201ENST00000378156 NCAM1P13591 858 aa15.65■□□□□ 0.1
NPHP4-201ENST00000378156 CCND1P24385 295 aa15.65■□□□□ 0.1
NPHP4-201ENST00000378156 AMPD2Q01433 879 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms