RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 SOX10P56693 466 aa16.63■□□□□ 0.25
CKAP4-201ENST00000378026 TMPRSS15P98073 1019 aa16.63■□□□□ 0.25
CKAP4-201ENST00000378026 SFT2D3Q587I9 215 aa16.63■□□□□ 0.25
CKAP4-201ENST00000378026 MON1BQ7L1V2 547 aa16.63■□□□□ 0.25
CKAP4-201ENST00000378026 SLC26A7Q8TE54 656 aa16.63■□□□□ 0.25
CKAP4-201ENST00000378026 NAT14Q8WUY8 206 aa16.63■□□□□ 0.25
CKAP4-201ENST00000378026 CCDC17Q96LX7 622 aa16.63■□□□□ 0.25
CKAP4-201ENST00000378026 SLC13A1Q9BZW2 595 aa16.63■□□□□ 0.25
CKAP4-201ENST00000378026 ABCA3Q99758 1704 aa16.63■□□□□ 0.25
CKAP4-201ENST00000378026 ZNFX1Q9P2E3 1918 aaKnown RBP16.62■□□□□ 0.25
CKAP4-201ENST00000378026 PRR5-ARHGAP8B1AHC4 643 aa16.62■□□□□ 0.25
CKAP4-201ENST00000378026 ARHGAP8P85298 464 aa16.62■□□□□ 0.25
CKAP4-201ENST00000378026 SLC25A3Q00325 362 aa16.62■□□□□ 0.25
CKAP4-201ENST00000378026 LSAMPQ13449 338 aa16.62■□□□□ 0.25
CKAP4-201ENST00000378026 MED21Q13503 144 aa16.62■□□□□ 0.25
CKAP4-201ENST00000378026 OGFOD1Q8N543 542 aa16.62■□□□□ 0.25
CKAP4-201ENST00000378026 MZB1Q8WU39 189 aa16.62■□□□□ 0.25
CKAP4-201ENST00000378026 C1orf112Q9NSG2 853 aa16.62■□□□□ 0.25
CKAP4-201ENST00000378026 KCND2Q9NZV8 630 aa16.62■□□□□ 0.25
CKAP4-201ENST00000378026 ZHX2Q9Y6X8 837 aa16.62■□□□□ 0.25
CKAP4-201ENST00000378026 TM7SF2O76062 418 aa16.62■□□□□ 0.25
CKAP4-201ENST00000378026 CRABP2P29373 138 aa16.62■□□□□ 0.25
CKAP4-201ENST00000378026 HIRAP54198 1017 aaPredicted RBP16.62■□□□□ 0.25
CKAP4-201ENST00000378026 AQP5P55064 265 aa16.62■□□□□ 0.25
CKAP4-201ENST00000378026 ACTR3P61158 418 aa16.62■□□□□ 0.25
CKAP4-201ENST00000378026 IRX4P78413 519 aa16.62■□□□□ 0.25
CKAP4-201ENST00000378026 ASPHQ12797 758 aa16.62■□□□□ 0.25
CKAP4-201ENST00000378026 CDHR3Q6ZTQ4 885 aa16.62■□□□□ 0.25
CKAP4-201ENST00000378026 NET1Q7Z628 596 aaPredicted RBP16.62■□□□□ 0.25
CKAP4-201ENST00000378026 MYLK4Q86YV6 388 aaPredicted RBP16.62■□□□□ 0.25
CKAP4-201ENST00000378026 CTAGE3PQ8IX95 158 aa16.62■□□□□ 0.25
CKAP4-201ENST00000378026 OR6Y1Q8NGX8 325 aa16.62■□□□□ 0.25
CKAP4-201ENST00000378026 CYB561D2O14569 222 aa16.61■□□□□ 0.25
CKAP4-201ENST00000378026 MAGEC1O60732 1142 aa16.61■□□□□ 0.25
CKAP4-201ENST00000378026 PFDN1O60925 122 aa16.61■□□□□ 0.25
CKAP4-201ENST00000378026 RPS6KA4O75676 772 aa16.61■□□□□ 0.25
CKAP4-201ENST00000378026 POLR2MP0CAP2 368 aa16.61■□□□□ 0.25
CKAP4-201ENST00000378026 VAV1P15498 845 aa16.61■□□□□ 0.25
CKAP4-201ENST00000378026 VCPP55072 806 aaKnown RBP16.61■□□□□ 0.25
CKAP4-201ENST00000378026 BASP1P80723 227 aaKnown RBP16.61■□□□□ 0.25
CKAP4-201ENST00000378026 MYBPC3Q14896 1274 aa16.61■□□□□ 0.25
CKAP4-201ENST00000378026 SMTNL2Q2TAL5 461 aa16.61■□□□□ 0.25
CKAP4-201ENST00000378026 TRMT5Q32P41 509 aaKnown RBP16.61■□□□□ 0.25
CKAP4-201ENST00000378026 PABPC1LQ4VXU2 614 aaKnown RBP16.61■□□□□ 0.25
CKAP4-201ENST00000378026 TMEM270Q6UE05 265 aa16.61■□□□□ 0.25
CKAP4-201ENST00000378026 POU5F2Q8N7G0 328 aa16.61■□□□□ 0.25
CKAP4-201ENST00000378026 WDR11Q9BZH6 1224 aa16.61■□□□□ 0.25
CKAP4-201ENST00000378026 ACSS3Q9H6R3 686 aa16.61■□□□□ 0.25
CKAP4-201ENST00000378026 NYAP2Q9P242 653 aa16.61■□□□□ 0.25
CKAP4-201ENST00000378026 PHF24Q9UPV7 400 aa16.61■□□□□ 0.25
CKAP4-201ENST00000378026 PCDHB2Q9Y5E7 798 aa16.61■□□□□ 0.25
CKAP4-201ENST00000378026 COMMD3-BMI1R4GMX3 469 aa16.61■□□□□ 0.25
CKAP4-201ENST00000378026 AQP4P55087 323 aa16.61■□□□□ 0.25
CKAP4-201ENST00000378026 YWHAGP61981 247 aaKnown RBP eCLIP16.61■□□□□ 0.25
CKAP4-201ENST00000378026 PSMC5P62195 406 aa16.61■□□□□ 0.25
CKAP4-201ENST00000378026 DLG1Q12959 904 aa16.61■□□□□ 0.25
CKAP4-201ENST00000378026 ZYXQ15942 572 aaKnown RBP16.61■□□□□ 0.25
CKAP4-201ENST00000378026 KLHL38Q2WGJ6 581 aa16.61■□□□□ 0.25
CKAP4-201ENST00000378026 HSF5Q4G112 596 aaPredicted RBP16.61■□□□□ 0.25
CKAP4-201ENST00000378026 PLA2G4FQ68DD2 849 aa16.61■□□□□ 0.25
CKAP4-201ENST00000378026 SPOCD1Q6ZMY3 1216 aa16.61■□□□□ 0.25
CKAP4-201ENST00000378026 LARGE2Q8N3Y3 721 aa16.61■□□□□ 0.25
CKAP4-201ENST00000378026 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.61■□□□□ 0.25
CKAP4-201ENST00000378026 KLHL23Q8NBE8 558 aa16.61■□□□□ 0.25
CKAP4-201ENST00000378026 CPT1BQ92523 772 aa16.61■□□□□ 0.25
CKAP4-201ENST00000378026 DNAAF2Q9NVR5 837 aaKnown RBP16.61■□□□□ 0.25
CKAP4-201ENST00000378026 SHOC2Q9UQ13 582 aa16.61■□□□□ 0.25
CKAP4-201ENST00000378026 F8W8V4 182 aa16.61■□□□□ 0.25
CKAP4-201ENST00000378026 I3L4J1 428 aa16.61■□□□□ 0.25
CKAP4-201ENST00000378026 ZNF862O60290 1169 aa16.61■□□□□ 0.25
CKAP4-201ENST00000378026 PDE5AO76074 875 aa16.61■□□□□ 0.25
CKAP4-201ENST00000378026 INHBAP08476 426 aa16.61■□□□□ 0.25
CKAP4-201ENST00000378026 RARRES1P49788 294 aa16.61■□□□□ 0.25
CKAP4-201ENST00000378026 PTP4A2Q12974 167 aa16.61■□□□□ 0.25
CKAP4-201ENST00000378026 KBTBD12Q3ZCT8 623 aa16.61■□□□□ 0.25
CKAP4-201ENST00000378026 IGDCC3Q8IVU1 814 aa16.61■□□□□ 0.25
CKAP4-201ENST00000378026 RCOR2Q8IZ40 523 aa16.61■□□□□ 0.25
CKAP4-201ENST00000378026 OLFM3Q96PB7 478 aa16.61■□□□□ 0.25
CKAP4-201ENST00000378026 FAM213AQ9BRX8 229 aa16.61■□□□□ 0.25
CKAP4-201ENST00000378026 CYP4F11Q9HBI6 524 aa16.61■□□□□ 0.25
CKAP4-201ENST00000378026 MRPL47Q9HD33 250 aaKnown RBP16.61■□□□□ 0.25
CKAP4-201ENST00000378026 DDX18Q9NVP1 670 aaKnown RBP16.61■□□□□ 0.25
CKAP4-201ENST00000378026 STK32BQ9NY57 414 aa16.61■□□□□ 0.25
CKAP4-201ENST00000378026 FAM200BP0CF97 657 aa16.6■□□□□ 0.25
CKAP4-201ENST00000378026 PDE1BQ01064 536 aa16.6■□□□□ 0.25
CKAP4-201ENST00000378026 BST1Q10588 318 aa16.6■□□□□ 0.25
CKAP4-201ENST00000378026 ZCCHC23Q6ZST2 131 aa16.6■□□□□ 0.25
CKAP4-201ENST00000378026 TRIM11Q96F44 468 aa16.6■□□□□ 0.25
CKAP4-201ENST00000378026 SSU72Q9NP77 194 aaKnown RBP16.6■□□□□ 0.25
CKAP4-201ENST00000378026 AGTPBP1Q9UPW5 1226 aa16.6■□□□□ 0.25
CKAP4-201ENST00000378026 PCDHB4Q9Y5E5 795 aa16.6■□□□□ 0.25
CKAP4-201ENST00000378026 COPEO14579 308 aa16.6■□□□□ 0.25
CKAP4-201ENST00000378026 ETV4P43268 484 aa16.6■□□□□ 0.25
CKAP4-201ENST00000378026 JAG1P78504 1218 aa16.6■□□□□ 0.25
CKAP4-201ENST00000378026 NCOA4Q13772 614 aa16.6■□□□□ 0.25
CKAP4-201ENST00000378026 KCNT1Q5JUK3 1230 aa16.6■□□□□ 0.25
CKAP4-201ENST00000378026 C15orf52Q6ZUT6 534 aaKnown RBP16.6■□□□□ 0.25
CKAP4-201ENST00000378026 FEZF2Q8TBJ5 459 aa16.6■□□□□ 0.25
CKAP4-201ENST00000378026 MCEEQ96PE7 176 aa16.6■□□□□ 0.25
CKAP4-201ENST00000378026 EBF4Q9BQW3 602 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms