RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 SNCAIPQ9Y6H5 919 aa17.32■□□□□ 0.36
TRIM39-201ENST00000376656 LRRC37AA6NMS7 1700 aa17.31■□□□□ 0.36
TRIM39-201ENST00000376656 ACO1P21399 889 aaKnown RBP17.31■□□□□ 0.36
TRIM39-201ENST00000376656 GNA15P30679 374 aa17.31■□□□□ 0.36
TRIM39-201ENST00000376656 AOC3Q16853 763 aa17.31■□□□□ 0.36
TRIM39-201ENST00000376656 BRDTQ58F21 947 aaPredicted RBP17.31■□□□□ 0.36
TRIM39-201ENST00000376656 TMEM270Q6UE05 265 aa17.31■□□□□ 0.36
TRIM39-201ENST00000376656 C15orf39Q6ZRI6 1047 aa17.31■□□□□ 0.36
TRIM39-201ENST00000376656 AZIN2Q96A70 460 aa17.31■□□□□ 0.36
TRIM39-201ENST00000376656 NR1H4Q96RI1 486 aaPredicted RBP17.31■□□□□ 0.36
TRIM39-201ENST00000376656 DBNDD1Q9H9R9 158 aa17.31■□□□□ 0.36
TRIM39-201ENST00000376656 ZC3H11AO75152 810 aaKnown RBP eCLIP17.31■□□□□ 0.36
TRIM39-201ENST00000376656 WNT7BP56706 349 aa17.31■□□□□ 0.36
TRIM39-201ENST00000376656 DYNLT1P63172 113 aa17.31■□□□□ 0.36
TRIM39-201ENST00000376656 CNPY1Q3B7I2 92 aa17.31■□□□□ 0.36
TRIM39-201ENST00000376656 BBS9Q3SYG4 887 aa17.31■□□□□ 0.36
TRIM39-201ENST00000376656 CHSY1Q86X52 802 aa17.31■□□□□ 0.36
TRIM39-201ENST00000376656 PALM2Q8IXS6 379 aa17.31■□□□□ 0.36
TRIM39-201ENST00000376656 GPD1LQ8N335 351 aa17.31■□□□□ 0.36
TRIM39-201ENST00000376656 RBM15BQ8NDT2 890 aaKnown RBP17.31■□□□□ 0.36
TRIM39-201ENST00000376656 CCDC110Q8TBZ0 833 aa17.31■□□□□ 0.36
TRIM39-201ENST00000376656 EZH1Q92800 747 aaPredicted RBP17.31■□□□□ 0.36
TRIM39-201ENST00000376656 PANX3Q96QZ0 392 aa17.31■□□□□ 0.36
TRIM39-201ENST00000376656 PHACTR1Q9C0D0 580 aa17.31■□□□□ 0.36
TRIM39-201ENST00000376656 KMT5AQ9NQR1 393 aa17.31■□□□□ 0.36
TRIM39-201ENST00000376656 PARVAQ9NVD7 372 aa17.31■□□□□ 0.36
TRIM39-201ENST00000376656 PCDHB4Q9Y5E5 795 aa17.31■□□□□ 0.36
TRIM39-201ENST00000376656 USP1O94782 785 aa17.31■□□□□ 0.36
TRIM39-201ENST00000376656 HLA-DRAP01903 254 aa17.31■□□□□ 0.36
TRIM39-201ENST00000376656 PSMC5P62195 406 aa17.31■□□□□ 0.36
TRIM39-201ENST00000376656 RIPOR1Q6ZS17 1223 aa17.31■□□□□ 0.36
TRIM39-201ENST00000376656 USP37Q86T82 979 aa17.31■□□□□ 0.36
TRIM39-201ENST00000376656 PPIL6Q8IXY8 311 aa17.31■□□□□ 0.36
TRIM39-201ENST00000376656 ARHGAP24Q8N264 748 aa17.31■□□□□ 0.36
TRIM39-201ENST00000376656 OGDHQ02218 1023 aa17.3■□□□□ 0.36
TRIM39-201ENST00000376656 MCL1Q07820 350 aa17.3■□□□□ 0.36
TRIM39-201ENST00000376656 ZYXQ15942 572 aaKnown RBP17.3■□□□□ 0.36
TRIM39-201ENST00000376656 HSF5Q4G112 596 aaPredicted RBP17.3■□□□□ 0.36
TRIM39-201ENST00000376656 TFDP3Q5H9I0 405 aa17.3■□□□□ 0.36
TRIM39-201ENST00000376656 WDR44Q5JSH3 913 aa17.3■□□□□ 0.36
TRIM39-201ENST00000376656 RASIP1Q5U651 963 aa17.3■□□□□ 0.36
TRIM39-201ENST00000376656 LDHDQ86WU2 507 aa17.3■□□□□ 0.36
TRIM39-201ENST00000376656 NAT8LQ8N9F0 302 aa17.3■□□□□ 0.36
TRIM39-201ENST00000376656 DRAXINQ8NBI3 349 aaPredicted RBP17.3■□□□□ 0.36
TRIM39-201ENST00000376656 B4GALNT2Q8NHY0 566 aa17.3■□□□□ 0.36
TRIM39-201ENST00000376656 VCPIP1Q96JH7 1222 aa17.3■□□□□ 0.36
TRIM39-201ENST00000376656 AGO4Q9HCK5 861 aaKnown RBP17.3■□□□□ 0.36
TRIM39-201ENST00000376656 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.3■□□□□ 0.36
TRIM39-201ENST00000376656 TMEM191CA6NGB0 347 aa17.3■□□□□ 0.36
TRIM39-201ENST00000376656 MAGEC1O60732 1142 aa17.3■□□□□ 0.36
TRIM39-201ENST00000376656 TMEM63AO94886 807 aa17.3■□□□□ 0.36
TRIM39-201ENST00000376656 TMEM191BP0C7N4 346 aa17.3■□□□□ 0.36
TRIM39-201ENST00000376656 PYGBP11216 843 aa17.3■□□□□ 0.36
TRIM39-201ENST00000376656 RTP1P59025 263 aa17.3■□□□□ 0.36
TRIM39-201ENST00000376656 DMP1Q13316 513 aaPredicted RBP17.3■□□□□ 0.36
TRIM39-201ENST00000376656 SLC35B2Q8TB61 432 aa17.3■□□□□ 0.36
TRIM39-201ENST00000376656 CYTH2Q99418 400 aa17.3■□□□□ 0.36
TRIM39-201ENST00000376656 TTC1Q99614 292 aa17.3■□□□□ 0.36
TRIM39-201ENST00000376656 ECSITQ9BQ95 431 aa17.3■□□□□ 0.36
TRIM39-201ENST00000376656 LYPLA2O95372 231 aa17.29■□□□□ 0.36
TRIM39-201ENST00000376656 CDKN2BP42772 138 aa17.29■□□□□ 0.36
TRIM39-201ENST00000376656 DSG1Q02413 1049 aa17.29■□□□□ 0.36
TRIM39-201ENST00000376656 FAAP100Q0VG06 881 aa17.29■□□□□ 0.36
TRIM39-201ENST00000376656 PTK7Q13308 1070 aa17.29■□□□□ 0.36
TRIM39-201ENST00000376656 TDRD10Q5VZ19 366 aaKnown RBP17.29■□□□□ 0.36
TRIM39-201ENST00000376656 ARHGAP22Q7Z5H3 698 aa17.29■□□□□ 0.36
TRIM39-201ENST00000376656 TMPRSS6Q8IU80 811 aa17.29■□□□□ 0.36
TRIM39-201ENST00000376656 SCUBE1Q8IWY4 988 aa17.29■□□□□ 0.36
TRIM39-201ENST00000376656 APOPT1Q96IL0 206 aa17.29■□□□□ 0.36
TRIM39-201ENST00000376656 MCEEQ96PE7 176 aa17.29■□□□□ 0.36
TRIM39-201ENST00000376656 FNBP1Q96RU3 617 aa17.29■□□□□ 0.36
TRIM39-201ENST00000376656 APOBEC3GQ9HC16 384 aaKnown RBP17.29■□□□□ 0.36
TRIM39-201ENST00000376656 FBXO28Q9NVF7 368 aa17.29■□□□□ 0.36
TRIM39-201ENST00000376656 STRIP2Q9ULQ0 834 aa17.29■□□□□ 0.36
TRIM39-201ENST00000376656 ZNRF3Q9ULT6 936 aa17.29■□□□□ 0.36
TRIM39-201ENST00000376656 CHMP2BQ9UQN3 213 aa17.29■□□□□ 0.36
TRIM39-201ENST00000376656 SLX4Q8IY92 1834 aa17.29■□□□□ 0.36
TRIM39-201ENST00000376656 F8W8V4 182 aa17.29■□□□□ 0.36
TRIM39-201ENST00000376656 HNRNPDLO14979 420 aaKnown RBP17.29■□□□□ 0.36
TRIM39-201ENST00000376656 BAG2O95816 211 aa17.29■□□□□ 0.36
TRIM39-201ENST00000376656 C1QBPQ07021 282 aaKnown RBP17.29■□□□□ 0.36
TRIM39-201ENST00000376656 CIAPIN1Q6FI81 312 aa17.29■□□□□ 0.36
TRIM39-201ENST00000376656 TRIM72Q6ZMU5 477 aa17.29■□□□□ 0.36
TRIM39-201ENST00000376656 IGDCC3Q8IVU1 814 aa17.29■□□□□ 0.36
TRIM39-201ENST00000376656 DMAP1Q9NPF5 467 aaPredicted RBP17.29■□□□□ 0.36
TRIM39-201ENST00000376656 CNTN3Q9P232 1028 aa17.29■□□□□ 0.36
TRIM39-201ENST00000376656 CAPN14A8MX76 684 aa17.29■□□□□ 0.36
TRIM39-201ENST00000376656 KDSRQ06136 332 aa17.29■□□□□ 0.36
TRIM39-201ENST00000376656 DYNC1I2Q13409 638 aaKnown RBP17.29■□□□□ 0.36
TRIM39-201ENST00000376656 TKFCQ3LXA3 575 aa17.29■□□□□ 0.36
TRIM39-201ENST00000376656 PCGF5Q86SE9 256 aa17.29■□□□□ 0.36
TRIM39-201ENST00000376656 MYLK4Q86YV6 388 aaPredicted RBP17.29■□□□□ 0.36
TRIM39-201ENST00000376656 THTPAQ9BU02 230 aa17.29■□□□□ 0.36
TRIM39-201ENST00000376656 IRAK4Q9NWZ3 460 aa17.29■□□□□ 0.36
TRIM39-201ENST00000376656 PPM1HQ9ULR3 514 aa17.29■□□□□ 0.36
TRIM39-201ENST00000376656 PLA2G4CQ9UP65 541 aa17.29■□□□□ 0.36
TRIM39-201ENST00000376656 PTPRJQ12913 1337 aa17.28■□□□□ 0.36
TRIM39-201ENST00000376656 TNNI1P19237 187 aa17.28■□□□□ 0.36
TRIM39-201ENST00000376656 RPL22P35268 128 aaKnown RBP17.28■□□□□ 0.36
TRIM39-201ENST00000376656 FAM91A1Q658Y4 838 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms