RNA–Protein interactions for RNA: ENST00000376567.6

DDR1-224, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-224ENST00000376567 CDT1Q9H211 546 aa13.01□□□□□ -0.33
DDR1-224ENST00000376567 GOLGA2P5Q9HBQ8 144 aa13.01□□□□□ -0.33
DDR1-224ENST00000376567 CHD4Q14839 1912 aa13□□□□□ -0.33
DDR1-224ENST00000376567 CCDC88AQ3V6T2 1871 aa13□□□□□ -0.33
DDR1-224ENST00000376567 GOLGA8CPA6NN73 597 aa13□□□□□ -0.33
DDR1-224ENST00000376567 XPOTO43592 962 aaKnown RBP13□□□□□ -0.33
DDR1-224ENST00000376567 BMPR2Q13873 1038 aa13□□□□□ -0.33
DDR1-224ENST00000376567 HACE1Q8IYU2 909 aa13□□□□□ -0.33
DDR1-224ENST00000376567 ATP11CQ8NB49 1132 aa13□□□□□ -0.33
DDR1-224ENST00000376567 LPIN3Q9BQK8 851 aa13□□□□□ -0.33
DDR1-224ENST00000376567 C12orf65Q9H3J6 166 aaKnown RBP13□□□□□ -0.33
DDR1-224ENST00000376567 LPXNO60711 386 aa13□□□□□ -0.33
DDR1-224ENST00000376567 CPA2P48052 419 aa13□□□□□ -0.33
DDR1-224ENST00000376567 RABGGTBP53611 331 aa13□□□□□ -0.33
DDR1-224ENST00000376567 CORO7P57737 925 aa13□□□□□ -0.33
DDR1-224ENST00000376567 NOMO3P69849 1222 aa13□□□□□ -0.33
DDR1-224ENST00000376567 LAMC2Q13753 1193 aa13□□□□□ -0.33
DDR1-224ENST00000376567 WDR49Q8IV35 697 aa13□□□□□ -0.33
DDR1-224ENST00000376567 FBXO36Q8NEA4 188 aa13□□□□□ -0.33
DDR1-224ENST00000376567 CFAP61Q8NHU2 1237 aa13□□□□□ -0.33
DDR1-224ENST00000376567 B3GNT5Q9BYG0 378 aa13□□□□□ -0.33
DDR1-224ENST00000376567 SHCBP1LQ9BZQ2 653 aa13□□□□□ -0.33
DDR1-224ENST00000376567 TXNRD2Q9NNW7 524 aa13□□□□□ -0.33
DDR1-224ENST00000376567 UBP1Q9NZI7 540 aa13□□□□□ -0.33
DDR1-224ENST00000376567 PPARGC1AQ9UBK2 798 aaKnown RBP13□□□□□ -0.33
DDR1-224ENST00000376567 DDX20Q9UHI6 824 aaKnown RBP13□□□□□ -0.33
DDR1-224ENST00000376567 NUDT5Q9UKK9 219 aa13□□□□□ -0.33
DDR1-224ENST00000376567 USP18Q9UMW8 372 aa13□□□□□ -0.33
DDR1-224ENST00000376567 LGALS2P05162 132 aa13□□□□□ -0.33
DDR1-224ENST00000376567 SNRPFP62306 86 aaKnown RBP13□□□□□ -0.33
DDR1-224ENST00000376567 DUPD1Q68J44 220 aa13□□□□□ -0.33
DDR1-224ENST00000376567 LBX2Q6XYB7 198 aa13□□□□□ -0.33
DDR1-224ENST00000376567 TRMT10CQ7L0Y3 403 aaKnown RBP13□□□□□ -0.33
DDR1-224ENST00000376567 ZNF677Q86XU0 584 aa13□□□□□ -0.33
DDR1-224ENST00000376567 NDRG1Q92597 394 aaKnown RBP13□□□□□ -0.33
DDR1-224ENST00000376567 ATP2A3Q93084 1043 aa13□□□□□ -0.33
DDR1-224ENST00000376567 TMEM176AQ96HP8 235 aa13□□□□□ -0.33
DDR1-224ENST00000376567 FAM193BQ96PV7 902 aaPredicted RBP13□□□□□ -0.33
DDR1-224ENST00000376567 CDKN2AIPQ9NXV6 580 aaPredicted RBP13□□□□□ -0.33
DDR1-224ENST00000376567 CACNG4Q9UBN1 327 aa13□□□□□ -0.33
DDR1-224ENST00000376567 NOCTQ9UK39 431 aaKnown RBP13□□□□□ -0.33
DDR1-224ENST00000376567 PTPRJQ12913 1337 aa12.99□□□□□ -0.33
DDR1-224ENST00000376567 ACKR2O00590 384 aa12.99□□□□□ -0.33
DDR1-224ENST00000376567 TTC4O95801 387 aa12.99□□□□□ -0.33
DDR1-224ENST00000376567 GPD1P21695 349 aa12.99□□□□□ -0.33
DDR1-224ENST00000376567 MIPP30301 263 aa12.99□□□□□ -0.33
DDR1-224ENST00000376567 GNL1P36915 607 aaPredicted RBP12.99□□□□□ -0.33
DDR1-224ENST00000376567 WNT7BP56706 349 aa12.99□□□□□ -0.33
DDR1-224ENST00000376567 NFIL3Q16649 462 aa12.99□□□□□ -0.33
DDR1-224ENST00000376567 QPCTQ16769 361 aa12.99□□□□□ -0.33
DDR1-224ENST00000376567 AGBL2Q5U5Z8 902 aa12.99□□□□□ -0.33
DDR1-224ENST00000376567 LVRNQ6Q4G3 990 aa12.99□□□□□ -0.33
DDR1-224ENST00000376567 SPATA21Q7Z572 469 aa12.99□□□□□ -0.33
DDR1-224ENST00000376567 SDCCAG8Q86SQ7 713 aaPredicted RBP12.99□□□□□ -0.33
DDR1-224ENST00000376567 CCDC125Q86Z20 511 aa12.99□□□□□ -0.33
DDR1-224ENST00000376567 TTC13Q8NBP0 860 aa12.99□□□□□ -0.33
DDR1-224ENST00000376567 MICAL1Q8TDZ2 1067 aa12.99□□□□□ -0.33
DDR1-224ENST00000376567 PGBD4Q96DM1 585 aa12.99□□□□□ -0.33
DDR1-224ENST00000376567 FIZ1Q96SL8 496 aa12.99□□□□□ -0.33
DDR1-224ENST00000376567 ECT2Q9H8V3 914 aa12.99□□□□□ -0.33
DDR1-224ENST00000376567 ZC3H7BQ9UGR2 993 aaKnown RBP12.99□□□□□ -0.33
DDR1-224ENST00000376567 APOL1O14791 398 aa12.99□□□□□ -0.33
DDR1-224ENST00000376567 HMBSP08397 361 aa12.99□□□□□ -0.33
DDR1-224ENST00000376567 CCDC130P13994 396 aa12.99□□□□□ -0.33
DDR1-224ENST00000376567 ACO1P21399 889 aaKnown RBP12.99□□□□□ -0.33
DDR1-224ENST00000376567 SULT1E1P49888 294 aa12.99□□□□□ -0.33
DDR1-224ENST00000376567 TXNRD3NBQ6F5E7 133 aa12.99□□□□□ -0.33
DDR1-224ENST00000376567 KCNV1Q6PIU1 500 aa12.99□□□□□ -0.33
DDR1-224ENST00000376567 CES3Q6UWW8 571 aa12.99□□□□□ -0.33
DDR1-224ENST00000376567 RYBPQ8N488 228 aaPredicted RBP12.99□□□□□ -0.33
DDR1-224ENST00000376567 TFAP2BQ92481 460 aa12.99□□□□□ -0.33
DDR1-224ENST00000376567 EXT2Q93063 718 aa12.99□□□□□ -0.33
DDR1-224ENST00000376567 ERP27Q96DN0 273 aa12.99□□□□□ -0.33
DDR1-224ENST00000376567 L3MBTL3Q96JM7 780 aaPredicted RBP12.99□□□□□ -0.33
DDR1-224ENST00000376567 MFSD14AQ96MC6 490 aa12.99□□□□□ -0.33
DDR1-224ENST00000376567 UNKQ9C0B0 810 aaKnown RBP12.99□□□□□ -0.33
DDR1-224ENST00000376567 R3HDMLQ9H3Y0 253 aa12.99□□□□□ -0.33
DDR1-224ENST00000376567 CD248Q9HCU0 757 aa12.99□□□□□ -0.33
DDR1-224ENST00000376567 DDX56Q9NY93 547 aaKnown RBP12.99□□□□□ -0.33
DDR1-224ENST00000376567 TSR3Q9UJK0 312 aaKnown RBP12.99□□□□□ -0.33
DDR1-224ENST00000376567 NR2E3Q9Y5X4 410 aa12.99□□□□□ -0.33
DDR1-224ENST00000376567 A0A0B4J269 797 aa12.99□□□□□ -0.33
DDR1-224ENST00000376567 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.99□□□□□ -0.33
DDR1-224ENST00000376567 RGS20O76081 388 aa12.99□□□□□ -0.33
DDR1-224ENST00000376567 MICAL2O94851 1124 aa12.99□□□□□ -0.33
DDR1-224ENST00000376567 NCF2P19878 526 aaPredicted RBP12.99□□□□□ -0.33
DDR1-224ENST00000376567 TAF5Q15542 800 aa12.99□□□□□ -0.33
DDR1-224ENST00000376567 DGKDQ16760 1214 aa12.99□□□□□ -0.33
DDR1-224ENST00000376567 CELF3Q5SZQ8 465 aaKnown RBP12.99□□□□□ -0.33
DDR1-224ENST00000376567 SPATS2Q86XZ4 545 aaKnown RBP12.99□□□□□ -0.33
DDR1-224ENST00000376567 APPL2Q8NEU8 664 aa12.99□□□□□ -0.33
DDR1-224ENST00000376567 SLC7A14Q8TBB6 771 aa12.99□□□□□ -0.33
DDR1-224ENST00000376567 CCHCR1Q8TD31 782 aa12.99□□□□□ -0.33
DDR1-224ENST00000376567 CRYGNQ8WXF5 182 aa12.99□□□□□ -0.33
DDR1-224ENST00000376567 PCMTD2Q9NV79 361 aa12.99□□□□□ -0.33
DDR1-224ENST00000376567 NINJ2Q9NZG7 142 aa12.99□□□□□ -0.33
DDR1-224ENST00000376567 ARHGAP28Q9P2N2 729 aa12.99□□□□□ -0.33
DDR1-224ENST00000376567 SMCHD1A6NHR9 2005 aa12.99□□□□□ -0.33
DDR1-224ENST00000376567 ABCG1P45844 678 aa12.98□□□□□ -0.33
DDR1-224ENST00000376567 AP3M2P53677 418 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms