RNA–Protein interactions for RNA: ENST00000375887.8

TNFSF13B-201, Transcript of TNF superfamily member 13b, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13B, Length 2,582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-201ENST00000375887 NAT8LQ8N9F0 302 aa13.03□□□□□ -0.32
TNFSF13B-201ENST00000375887 KCNV2Q8TDN2 545 aa13.03□□□□□ -0.32
TNFSF13B-201ENST00000375887 PRPF31Q8WWY3 499 aaKnown RBP13.03□□□□□ -0.32
TNFSF13B-201ENST00000375887 TCHPQ9BT92 498 aa13.03□□□□□ -0.32
TNFSF13B-201ENST00000375887 IMPG2Q9BZV3 1241 aa13.03□□□□□ -0.32
TNFSF13B-201ENST00000375887 ALG13Q9NP73 1137 aaKnown RBP13.03□□□□□ -0.32
TNFSF13B-201ENST00000375887 KANSL3Q9P2N6 904 aa13.03□□□□□ -0.32
TNFSF13B-201ENST00000375887 SLC17A7Q9P2U7 560 aa13.03□□□□□ -0.32
TNFSF13B-201ENST00000375887 PSMC3IPQ9P2W1 217 aaPredicted RBP13.03□□□□□ -0.32
TNFSF13B-201ENST00000375887 PPP1R1BQ9UD71 204 aaPredicted RBP13.03□□□□□ -0.32
TNFSF13B-201ENST00000375887 MSCO60682 206 aa13.03□□□□□ -0.32
TNFSF13B-201ENST00000375887 TMEM63AO94886 807 aa13.03□□□□□ -0.32
TNFSF13B-201ENST00000375887 LSM8O95777 96 aaKnown RBP13.03□□□□□ -0.32
TNFSF13B-201ENST00000375887 GEMIN4P57678 1058 aaKnown RBP13.03□□□□□ -0.32
TNFSF13B-201ENST00000375887 LACTBP83111 547 aaPredicted RBP13.03□□□□□ -0.32
TNFSF13B-201ENST00000375887 NAA25Q14CX7 972 aa13.03□□□□□ -0.32
TNFSF13B-201ENST00000375887 SETDB1Q15047 1291 aa13.03□□□□□ -0.32
TNFSF13B-201ENST00000375887 TARBP2Q15633 366 aaKnown RBP13.03□□□□□ -0.32
TNFSF13B-201ENST00000375887 GNPTABQ3T906 1256 aa13.03□□□□□ -0.32
TNFSF13B-201ENST00000375887 HHATQ5VTY9 493 aa13.03□□□□□ -0.32
TNFSF13B-201ENST00000375887 RHPN2Q8IUC4 686 aa13.03□□□□□ -0.32
TNFSF13B-201ENST00000375887 IGDCC3Q8IVU1 814 aa13.03□□□□□ -0.32
TNFSF13B-201ENST00000375887 NIPA2Q8N8Q9 360 aa13.03□□□□□ -0.32
TNFSF13B-201ENST00000375887 PYROXD1Q8WU10 500 aa13.03□□□□□ -0.32
TNFSF13B-201ENST00000375887 MZB1Q8WU39 189 aa13.03□□□□□ -0.32
TNFSF13B-201ENST00000375887 TBC1D10AQ9BXI6 508 aa13.03□□□□□ -0.32
TNFSF13B-201ENST00000375887 NIFKQ9BYG3 293 aaKnown RBP13.03□□□□□ -0.32
TNFSF13B-201ENST00000375887 TXLNGQ9NUQ3 528 aa13.03□□□□□ -0.32
TNFSF13B-201ENST00000375887 SLC5A4Q9NY91 659 aa13.03□□□□□ -0.32
TNFSF13B-201ENST00000375887 SLC24A2Q9UI40 661 aa13.03□□□□□ -0.32
TNFSF13B-201ENST00000375887 ZMYND8Q9ULU4 1186 aaPredicted RBP13.03□□□□□ -0.32
TNFSF13B-201ENST00000375887 PPP1R12AO14974 1030 aaPredicted RBP13.02□□□□□ -0.32
TNFSF13B-201ENST00000375887 PSMA2P25787 234 aa13.02□□□□□ -0.32
TNFSF13B-201ENST00000375887 ABCD1P33897 745 aa13.02□□□□□ -0.32
TNFSF13B-201ENST00000375887 ATP11AP98196 1134 aa13.02□□□□□ -0.32
TNFSF13B-201ENST00000375887 OVGP1Q12889 678 aa13.02□□□□□ -0.32
TNFSF13B-201ENST00000375887 TNFAIP1Q13829 316 aa13.02□□□□□ -0.32
TNFSF13B-201ENST00000375887 MAB21L3Q8N8X9 362 aa13.02□□□□□ -0.32
TNFSF13B-201ENST00000375887 FAM13CQ8NE31 585 aa13.02□□□□□ -0.32
TNFSF13B-201ENST00000375887 PTPRN2Q92932 1015 aa13.02□□□□□ -0.32
TNFSF13B-201ENST00000375887 RSRC1Q96IZ7 334 aaKnown RBP13.02□□□□□ -0.32
TNFSF13B-201ENST00000375887 DHRS4Q9BTZ2 278 aa13.02□□□□□ -0.32
TNFSF13B-201ENST00000375887 TEX13BQ9BXU2 312 aa13.02□□□□□ -0.32
TNFSF13B-201ENST00000375887 NIF3L1Q9GZT8 377 aa13.02□□□□□ -0.32
TNFSF13B-201ENST00000375887 XYLT2Q9H1B5 865 aa13.02□□□□□ -0.32
TNFSF13B-201ENST00000375887 ACAD9Q9H845 621 aa13.02□□□□□ -0.32
TNFSF13B-201ENST00000375887 NPHS2Q9NP85 383 aa13.02□□□□□ -0.32
TNFSF13B-201ENST00000375887 SENP1Q9P0U3 644 aa13.02□□□□□ -0.32
TNFSF13B-201ENST00000375887 KCNG1Q9UIX4 513 aa13.02□□□□□ -0.32
TNFSF13B-201ENST00000375887 HACL1Q9UJ83 578 aa13.02□□□□□ -0.32
TNFSF13B-201ENST00000375887 GJA3Q9Y6H8 435 aa13.02□□□□□ -0.32
TNFSF13B-201ENST00000375887 IGKV6D-21A0A0A0MT36 114 aa13.02□□□□□ -0.33
TNFSF13B-201ENST00000375887 GJB1P08034 283 aa13.02□□□□□ -0.33
TNFSF13B-201ENST00000375887 EIF4BP23588 611 aaKnown RBP13.02□□□□□ -0.33
TNFSF13B-201ENST00000375887 MARK3P27448 753 aa13.02□□□□□ -0.33
TNFSF13B-201ENST00000375887 EPHB2P29323 1055 aa13.02□□□□□ -0.33
TNFSF13B-201ENST00000375887 CDH5P33151 784 aaPredicted RBP13.02□□□□□ -0.33
TNFSF13B-201ENST00000375887 ASPAP45381 313 aa13.02□□□□□ -0.33
TNFSF13B-201ENST00000375887 RAP1GAPP47736 663 aa13.02□□□□□ -0.33
TNFSF13B-201ENST00000375887 TFAMQ00059 246 aaKnown RBP13.02□□□□□ -0.33
TNFSF13B-201ENST00000375887 TAF1BQ53T94 588 aaPredicted RBP13.02□□□□□ -0.33
TNFSF13B-201ENST00000375887 ANKRD20A2Q5SQ80 823 aa13.02□□□□□ -0.33
TNFSF13B-201ENST00000375887 ANKRD20A1Q5TYW2 823 aa13.02□□□□□ -0.33
TNFSF13B-201ENST00000375887 ANKRD20A3Q5VUR7 823 aa13.02□□□□□ -0.33
TNFSF13B-201ENST00000375887 WDR49Q8IV35 697 aa13.02□□□□□ -0.33
TNFSF13B-201ENST00000375887 SCYL3Q8IZE3 742 aa13.02□□□□□ -0.33
TNFSF13B-201ENST00000375887 FBXO36Q8NEA4 188 aa13.02□□□□□ -0.33
TNFSF13B-201ENST00000375887 TCP10LQ8TDR4 215 aa13.02□□□□□ -0.33
TNFSF13B-201ENST00000375887 WRNIP1Q96S55 665 aa13.02□□□□□ -0.33
TNFSF13B-201ENST00000375887 PAFAH2Q99487 392 aa13.02□□□□□ -0.33
TNFSF13B-201ENST00000375887 TMEM134Q9H6X4 195 aa13.02□□□□□ -0.33
TNFSF13B-201ENST00000375887 DDX56Q9NY93 547 aaKnown RBP13.02□□□□□ -0.33
TNFSF13B-201ENST00000375887 PCSK1NQ9UHG2 260 aa13.02□□□□□ -0.33
TNFSF13B-201ENST00000375887 DCTN4Q9UJW0 460 aa13.02□□□□□ -0.33
TNFSF13B-201ENST00000375887 POLIQ9UNA4 740 aa13.02□□□□□ -0.33
TNFSF13B-201ENST00000375887 AGTPBP1Q9UPW5 1226 aa13.02□□□□□ -0.33
TNFSF13B-201ENST00000375887 PIK3R2O00459 728 aa13.01□□□□□ -0.33
TNFSF13B-201ENST00000375887 ABLIM1O14639 778 aa13.01□□□□□ -0.33
TNFSF13B-201ENST00000375887 SRGAP2CP0DJJ0 459 aa13.01□□□□□ -0.33
TNFSF13B-201ENST00000375887 KRT3P12035 628 aa13.01□□□□□ -0.33
TNFSF13B-201ENST00000375887 ATP2A2P16615 1042 aaKnown RBP13.01□□□□□ -0.33
TNFSF13B-201ENST00000375887 OAZ1P54368 228 aa13.01□□□□□ -0.33
TNFSF13B-201ENST00000375887 ZNF280AP59817 542 aaPredicted RBP13.01□□□□□ -0.33
TNFSF13B-201ENST00000375887 RASA2Q15283 850 aa13.01□□□□□ -0.33
TNFSF13B-201ENST00000375887 PARP6Q2NL67 630 aa13.01□□□□□ -0.33
TNFSF13B-201ENST00000375887 PPP1R2P3Q6NXS1 205 aa13.01□□□□□ -0.33
TNFSF13B-201ENST00000375887 ADGRD1Q6QNK2 874 aa13.01□□□□□ -0.33
TNFSF13B-201ENST00000375887 BZW1Q7L1Q6 419 aaKnown RBP13.01□□□□□ -0.33
TNFSF13B-201ENST00000375887 MTDHQ86UE4 582 aaKnown RBP13.01□□□□□ -0.33
TNFSF13B-201ENST00000375887 PPIL6Q8IXY8 311 aa13.01□□□□□ -0.33
TNFSF13B-201ENST00000375887 CEP120Q8N960 986 aa13.01□□□□□ -0.33
TNFSF13B-201ENST00000375887 FAM71DQ8N9W8 422 aa13.01□□□□□ -0.33
TNFSF13B-201ENST00000375887 RFWD2Q8NHY2 731 aa13.01□□□□□ -0.33
TNFSF13B-201ENST00000375887 LRRN4Q8WUT4 740 aa13.01□□□□□ -0.33
TNFSF13B-201ENST00000375887 DCAKDQ8WVC6 231 aa13.01□□□□□ -0.33
TNFSF13B-201ENST00000375887 LBHD1Q9BQE6 289 aaPredicted RBP13.01□□□□□ -0.33
TNFSF13B-201ENST00000375887 R3HDMLQ9H3Y0 253 aa13.01□□□□□ -0.33
TNFSF13B-201ENST00000375887 AFG3L2Q9Y4W6 797 aa13.01□□□□□ -0.33
TNFSF13B-201ENST00000375887 ATP2A1O14983 1001 aa13.01□□□□□ -0.33
TNFSF13B-201ENST00000375887 PEX11AO75192 247 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms