RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 C2orf40Q9H1Z8 148 aa6.83□□□□□ -1.32
SMC1A-202ENST00000375340 TASP1Q9H6P5 420 aa6.83□□□□□ -1.32
SMC1A-202ENST00000375340 SARS2Q9NP81 518 aaKnown RBP6.83□□□□□ -1.32
SMC1A-202ENST00000375340 C20orf96Q9NUD7 363 aaPredicted RBP6.83□□□□□ -1.32
SMC1A-202ENST00000375340 ORC6Q9Y5N6 252 aa6.83□□□□□ -1.32
SMC1A-202ENST00000375340 SNX9Q9Y5X1 595 aa6.83□□□□□ -1.32
SMC1A-202ENST00000375340 FRMPD4Q14CM0 1322 aa6.83□□□□□ -1.32
SMC1A-202ENST00000375340 EEF2KO00418 725 aaKnown RBP6.83□□□□□ -1.32
SMC1A-202ENST00000375340 SH3BGRP55822 239 aaPredicted RBP6.83□□□□□ -1.32
SMC1A-202ENST00000375340 PTK6Q13882 451 aa6.83□□□□□ -1.32
SMC1A-202ENST00000375340 RASA2Q15283 850 aa6.83□□□□□ -1.32
SMC1A-202ENST00000375340 TRIP10Q15642 601 aa6.83□□□□□ -1.32
SMC1A-202ENST00000375340 PTF1AQ7RTS3 328 aa6.83□□□□□ -1.32
SMC1A-202ENST00000375340 PID1Q7Z2X4 250 aa6.83□□□□□ -1.32
SMC1A-202ENST00000375340 NUP93Q8N1F7 819 aa6.83□□□□□ -1.32
SMC1A-202ENST00000375340 FAM193BQ96PV7 902 aaPredicted RBP6.83□□□□□ -1.32
SMC1A-202ENST00000375340 PLEKHA5Q9HAU0 1116 aa6.83□□□□□ -1.32
SMC1A-202ENST00000375340 CSDE1O75534 798 aaKnown RBP6.83□□□□□ -1.32
SMC1A-202ENST00000375340 ATP6V1B1P15313 513 aa6.83□□□□□ -1.32
SMC1A-202ENST00000375340 TCF7P36402 384 aaPredicted RBP6.83□□□□□ -1.32
SMC1A-202ENST00000375340 KPNA2P52292 529 aaKnown RBP6.83□□□□□ -1.32
SMC1A-202ENST00000375340 TPI1P60174 286 aa6.83□□□□□ -1.32
SMC1A-202ENST00000375340 PGM5Q15124 567 aa6.83□□□□□ -1.32
SMC1A-202ENST00000375340 TCHHL1Q5QJ38 904 aaPredicted RBP6.83□□□□□ -1.32
SMC1A-202ENST00000375340 HGSNATQ68CP4 663 aa6.83□□□□□ -1.32
SMC1A-202ENST00000375340 EP400NLQ6ZTU2 488 aa6.83□□□□□ -1.32
SMC1A-202ENST00000375340 ANO5Q75V66 913 aa6.83□□□□□ -1.32
SMC1A-202ENST00000375340 SCUBE1Q8IWY4 988 aa6.83□□□□□ -1.32
SMC1A-202ENST00000375340 TEKT4Q8WW24 435 aa6.83□□□□□ -1.32
SMC1A-202ENST00000375340 SHISA4Q96DD7 197 aa6.83□□□□□ -1.32
SMC1A-202ENST00000375340 IRAK4Q9NWZ3 460 aa6.83□□□□□ -1.32
SMC1A-202ENST00000375340 NID2Q14112 1375 aa6.82□□□□□ -1.32
SMC1A-202ENST00000375340 SNRPAP09012 282 aaKnown RBP6.82□□□□□ -1.32
SMC1A-202ENST00000375340 GYS1P13807 737 aa6.82□□□□□ -1.32
SMC1A-202ENST00000375340 MOXD1Q6UVY6 613 aa6.82□□□□□ -1.32
SMC1A-202ENST00000375340 KRT82Q9NSB4 513 aa6.82□□□□□ -1.32
SMC1A-202ENST00000375340 ATP8B3O60423 1300 aa6.82□□□□□ -1.32
SMC1A-202ENST00000375340 DDX3YO15523 660 aaKnown RBP6.82□□□□□ -1.32
SMC1A-202ENST00000375340 SUPT3HO75486 399 aa6.82□□□□□ -1.32
SMC1A-202ENST00000375340 NPTXRO95502 500 aa6.82□□□□□ -1.32
SMC1A-202ENST00000375340 GNAT1P11488 350 aa6.82□□□□□ -1.32
SMC1A-202ENST00000375340 NUDT2P50583 147 aa6.82□□□□□ -1.32
SMC1A-202ENST00000375340 NME5P56597 212 aa6.82□□□□□ -1.32
SMC1A-202ENST00000375340 PPP3CAQ08209 521 aa6.82□□□□□ -1.32
SMC1A-202ENST00000375340 RRP1BQ14684 758 aaKnown RBP6.82□□□□□ -1.32
SMC1A-202ENST00000375340 IRF2BP2Q7Z5L9 587 aa6.82□□□□□ -1.32
SMC1A-202ENST00000375340 NDUFAF2Q8N183 169 aa6.82□□□□□ -1.32
SMC1A-202ENST00000375340 CNOT7Q9UIV1 285 aaKnown RBP6.82□□□□□ -1.32
SMC1A-202ENST00000375340 COL1A1P02452 1464 aaPredicted RBP6.82□□□□□ -1.32
SMC1A-202ENST00000375340 DDX60Q8IY21 1712 aaKnown RBP6.82□□□□□ -1.32
SMC1A-202ENST00000375340 HUS1O60921 280 aa6.82□□□□□ -1.32
SMC1A-202ENST00000375340 PROSCO94903 275 aa6.82□□□□□ -1.32
SMC1A-202ENST00000375340 CYP1A2P05177 515 aa6.82□□□□□ -1.32
SMC1A-202ENST00000375340 AP3M2P53677 418 aa6.82□□□□□ -1.32
SMC1A-202ENST00000375340 MYL6P60660 151 aa6.82□□□□□ -1.32
SMC1A-202ENST00000375340 DNAL1Q4LDG9 190 aa6.82□□□□□ -1.32
SMC1A-202ENST00000375340 IZUMO2Q6UXV1 221 aa6.82□□□□□ -1.32
SMC1A-202ENST00000375340 ZNF662Q6ZS27 426 aa6.82□□□□□ -1.32
SMC1A-202ENST00000375340 ATXN2LQ8WWM7 1075 aaKnown RBP6.82□□□□□ -1.32
SMC1A-202ENST00000375340 ART4Q93070 314 aa6.82□□□□□ -1.32
SMC1A-202ENST00000375340 CGRRF1Q99675 332 aa6.82□□□□□ -1.32
SMC1A-202ENST00000375340 UPF3AQ9H1J1 476 aaKnown RBP6.82□□□□□ -1.32
SMC1A-202ENST00000375340 COG5Q9UP83 839 aa6.82□□□□□ -1.32
SMC1A-202ENST00000375340 NWD2Q9ULI1 1742 aa6.82□□□□□ -1.32
SMC1A-202ENST00000375340 C2orf71A6NGG8 1288 aa6.82□□□□□ -1.32
SMC1A-202ENST00000375340 PECAM1P16284 738 aaPredicted RBP6.82□□□□□ -1.32
SMC1A-202ENST00000375340 CRYMQ14894 314 aa6.82□□□□□ -1.32
SMC1A-202ENST00000375340 PDCD2Q16342 344 aaPredicted RBP6.82□□□□□ -1.32
SMC1A-202ENST00000375340 SUPT20HL1Q3ZLR7 823 aa6.82□□□□□ -1.32
SMC1A-202ENST00000375340 XKR3Q5GH77 459 aa6.82□□□□□ -1.32
SMC1A-202ENST00000375340 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.82□□□□□ -1.32
SMC1A-202ENST00000375340 MREGQ8N565 214 aa6.82□□□□□ -1.32
SMC1A-202ENST00000375340 ZDHHC15Q96MV8 337 aa6.82□□□□□ -1.32
SMC1A-202ENST00000375340 AJAP1Q9UKB5 411 aaPredicted RBP6.82□□□□□ -1.32
SMC1A-202ENST00000375340 TCRBV7S2A1N4TA0A589 114 aa6.82□□□□□ -1.32
SMC1A-202ENST00000375340 XPOTO43592 962 aaKnown RBP6.82□□□□□ -1.32
SMC1A-202ENST00000375340 ADCY3O60266 1144 aa6.82□□□□□ -1.32
SMC1A-202ENST00000375340 HNRNPCL1O60812 293 aaKnown RBP6.82□□□□□ -1.32
SMC1A-202ENST00000375340 SHOX2O60902 331 aaPredicted RBP6.82□□□□□ -1.32
SMC1A-202ENST00000375340 IREB2P48200 963 aaKnown RBP6.82□□□□□ -1.32
SMC1A-202ENST00000375340 PLOD1Q02809 727 aaPredicted RBP6.82□□□□□ -1.32
SMC1A-202ENST00000375340 AUHQ13825 339 aaKnown RBP6.82□□□□□ -1.32
SMC1A-202ENST00000375340 MORF4L2Q15014 288 aa6.82□□□□□ -1.32
SMC1A-202ENST00000375340 ERMARDQ5T6L9 678 aa6.82□□□□□ -1.32
SMC1A-202ENST00000375340 LAYNQ6UX15 382 aa6.82□□□□□ -1.32
SMC1A-202ENST00000375340 ARMCX2Q7L311 632 aa6.82□□□□□ -1.32
SMC1A-202ENST00000375340 PPHLN1Q8NEY8 458 aaKnown RBP6.82□□□□□ -1.32
SMC1A-202ENST00000375340 KAT2BQ92831 832 aa6.82□□□□□ -1.32
SMC1A-202ENST00000375340 WDR27A2RRH5 827 aa6.82□□□□□ -1.32
SMC1A-202ENST00000375340 GTPBP10A4D1E9 387 aaKnown RBP6.82□□□□□ -1.32
SMC1A-202ENST00000375340 TLR2O60603 784 aa6.82□□□□□ -1.32
SMC1A-202ENST00000375340 ENTPD3O75355 529 aa6.82□□□□□ -1.32
SMC1A-202ENST00000375340 RABGAP1LQ5R372 815 aa6.82□□□□□ -1.32
SMC1A-202ENST00000375340 EFCAB12Q6NXP0 572 aa6.82□□□□□ -1.32
SMC1A-202ENST00000375340 TCP10LQ8TDR4 215 aa6.82□□□□□ -1.32
SMC1A-202ENST00000375340 MTBPQ96DY7 904 aa6.82□□□□□ -1.32
SMC1A-202ENST00000375340 DRC3Q9H069 523 aa6.82□□□□□ -1.32
SMC1A-202ENST00000375340 OLFML3Q9NRN5 406 aa6.82□□□□□ -1.32
SMC1A-202ENST00000375340 RHBDL2Q9NX52 303 aa6.82□□□□□ -1.32
SMC1A-202ENST00000375340 USP18Q9UMW8 372 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms