RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 LRCH4O75427 683 aa13.27□□□□□ -0.28
PRPF4-202ENST00000374199 RPS6KA5O75582 802 aa13.27□□□□□ -0.28
PRPF4-202ENST00000374199 ECM2O94769 699 aaPredicted RBP13.27□□□□□ -0.28
PRPF4-202ENST00000374199 TTMPQ5BVD1 217 aa13.27□□□□□ -0.28
PRPF4-202ENST00000374199 DDX42Q86XP3 938 aaKnown RBP eCLIP13.27□□□□□ -0.28
PRPF4-202ENST00000374199 TOP6BLQ8N6T0 577 aa13.27□□□□□ -0.28
PRPF4-202ENST00000374199 FAM49AQ9H0Q0 323 aaPredicted RBP13.27□□□□□ -0.28
PRPF4-202ENST00000374199 PCNTO95613 3336 aa13.27□□□□□ -0.29
PRPF4-202ENST00000374199 hCG_1818297A0A087WSY0 165 aa13.27□□□□□ -0.29
PRPF4-202ENST00000374199 C2CD4BA6NLJ0 364 aa13.27□□□□□ -0.29
PRPF4-202ENST00000374199 F8VP50 259 aa13.27□□□□□ -0.29
PRPF4-202ENST00000374199 RNF40O75150 1001 aa13.27□□□□□ -0.29
PRPF4-202ENST00000374199 GJB6O95452 261 aa13.27□□□□□ -0.29
PRPF4-202ENST00000374199 KRT19P08727 400 aa13.27□□□□□ -0.29
PRPF4-202ENST00000374199 RFC1P35251 1148 aaPredicted RBP13.27□□□□□ -0.29
PRPF4-202ENST00000374199 CACNB2Q08289 660 aaPredicted RBP13.27□□□□□ -0.29
PRPF4-202ENST00000374199 OASLQ15646 514 aaKnown RBP13.27□□□□□ -0.29
PRPF4-202ENST00000374199 MFSD14CQ5VZR4 134 aa13.27□□□□□ -0.29
PRPF4-202ENST00000374199 TTC30AQ86WT1 665 aa13.27□□□□□ -0.29
PRPF4-202ENST00000374199 ZDHHC17Q8IUH5 632 aa13.27□□□□□ -0.29
PRPF4-202ENST00000374199 SMC1BQ8NDV3 1235 aa13.27□□□□□ -0.29
PRPF4-202ENST00000374199 CENPIQ92674 756 aaPredicted RBP13.27□□□□□ -0.29
PRPF4-202ENST00000374199 NKD2Q969F2 451 aaPredicted RBP13.27□□□□□ -0.29
PRPF4-202ENST00000374199 ADAM21Q9UKJ8 722 aa13.27□□□□□ -0.29
PRPF4-202ENST00000374199 DRG1Q9Y295 367 aaKnown RBP13.27□□□□□ -0.29
PRPF4-202ENST00000374199 R3HDM2Q9Y2K5 976 aaKnown RBP13.27□□□□□ -0.29
PRPF4-202ENST00000374199 CAND2O75155 1236 aa13.26□□□□□ -0.29
PRPF4-202ENST00000374199 ZNF143P52747 638 aaPredicted RBP13.26□□□□□ -0.29
PRPF4-202ENST00000374199 YARSP54577 528 aaKnown RBP13.26□□□□□ -0.29
PRPF4-202ENST00000374199 TMEM62Q0P6H9 643 aa13.26□□□□□ -0.29
PRPF4-202ENST00000374199 NFX1Q12986 1120 aaKnown RBP13.26□□□□□ -0.29
PRPF4-202ENST00000374199 SLC43A3Q8NBI5 491 aa13.26□□□□□ -0.29
PRPF4-202ENST00000374199 JOSD2Q8TAC2 188 aa13.26□□□□□ -0.29
PRPF4-202ENST00000374199 SPATA18Q8TC71 538 aa13.26□□□□□ -0.29
PRPF4-202ENST00000374199 MAGOHBQ96A72 148 aaKnown RBP13.26□□□□□ -0.29
PRPF4-202ENST00000374199 LRRC45Q96CN5 670 aa13.26□□□□□ -0.29
PRPF4-202ENST00000374199 OSBPL8Q9BZF1 889 aa13.26□□□□□ -0.29
PRPF4-202ENST00000374199 RNF39Q9H2S5 420 aa13.26□□□□□ -0.29
PRPF4-202ENST00000374199 PARP2Q9UGN5 583 aa13.26□□□□□ -0.29
PRPF4-202ENST00000374199 RASAL2Q9UJF2 1139 aa13.26□□□□□ -0.29
PRPF4-202ENST00000374199 PRDM4Q9UKN5 801 aa13.26□□□□□ -0.29
PRPF4-202ENST00000374199 ZNF623O75123 536 aa13.26□□□□□ -0.29
PRPF4-202ENST00000374199 SSTR3P32745 418 aaPredicted RBP13.26□□□□□ -0.29
PRPF4-202ENST00000374199 SKOR1P84550 965 aa13.26□□□□□ -0.29
PRPF4-202ENST00000374199 MTMR3Q13615 1198 aa13.26□□□□□ -0.29
PRPF4-202ENST00000374199 TMEM132AQ24JP5 1023 aa13.26□□□□□ -0.29
PRPF4-202ENST00000374199 NBPF20Q3BBV1 942 aa13.26□□□□□ -0.29
PRPF4-202ENST00000374199 ZNF394Q53GI3 561 aa13.26□□□□□ -0.29
PRPF4-202ENST00000374199 DAB2IPQ5VWQ8 1189 aa13.26□□□□□ -0.29
PRPF4-202ENST00000374199 TRAF7Q6Q0C0 670 aa13.26□□□□□ -0.29
PRPF4-202ENST00000374199 C7orf31Q8N865 590 aa13.26□□□□□ -0.29
PRPF4-202ENST00000374199 AAASQ9NRG9 546 aa13.26□□□□□ -0.29
PRPF4-202ENST00000374199 CHST7Q9NS84 486 aa13.26□□□□□ -0.29
PRPF4-202ENST00000374199 FAN1Q9Y2M0 1017 aa13.26□□□□□ -0.29
PRPF4-202ENST00000374199 TANC1Q9C0D5 1861 aa13.26□□□□□ -0.29
PRPF4-202ENST00000374199 RALAP11233 206 aa13.26□□□□□ -0.29
PRPF4-202ENST00000374199 FGFR1P11362 822 aa13.26□□□□□ -0.29
PRPF4-202ENST00000374199 IL1R2P27930 398 aa13.26□□□□□ -0.29
PRPF4-202ENST00000374199 PSMC4P43686 418 aa13.26□□□□□ -0.29
PRPF4-202ENST00000374199 ADCY2Q08462 1091 aa13.26□□□□□ -0.29
PRPF4-202ENST00000374199 TXNRD3NBQ6F5E7 133 aa13.26□□□□□ -0.29
PRPF4-202ENST00000374199 SPOCD1Q6ZMY3 1216 aa13.26□□□□□ -0.29
PRPF4-202ENST00000374199 TSPAN16Q9UKR8 245 aa13.26□□□□□ -0.29
PRPF4-202ENST00000374199 LIASO43766 372 aa13.25□□□□□ -0.29
PRPF4-202ENST00000374199 TNNT3P45378 269 aaPredicted RBP13.25□□□□□ -0.29
PRPF4-202ENST00000374199 FLT3LGP49771 235 aa13.25□□□□□ -0.29
PRPF4-202ENST00000374199 FBXO47Q5MNV8 452 aa13.25□□□□□ -0.29
PRPF4-202ENST00000374199 CYP4A22Q5TCH4 519 aa13.25□□□□□ -0.29
PRPF4-202ENST00000374199 SLC35B2Q8TB61 432 aa13.25□□□□□ -0.29
PRPF4-202ENST00000374199 IFT81Q8WYA0 676 aa13.25□□□□□ -0.29
PRPF4-202ENST00000374199 ZNF560Q96MR9 790 aa13.25□□□□□ -0.29
PRPF4-202ENST00000374199 MIS12Q9H081 205 aa13.25□□□□□ -0.29
PRPF4-202ENST00000374199 HES2Q9Y543 173 aa13.25□□□□□ -0.29
PRPF4-202ENST00000374199 DCAF8L1A6NGE4 600 aa13.25□□□□□ -0.29
PRPF4-202ENST00000374199 KRT3P12035 628 aa13.25□□□□□ -0.29
PRPF4-202ENST00000374199 PRKCZQ05513 592 aa13.25□□□□□ -0.29
PRPF4-202ENST00000374199 PPP1R26Q5T8A7 1209 aaPredicted RBP13.25□□□□□ -0.29
PRPF4-202ENST00000374199 FAF2Q96CS3 445 aa13.25□□□□□ -0.29
PRPF4-202ENST00000374199 HINFPQ9BQA5 517 aa13.25□□□□□ -0.29
PRPF4-202ENST00000374199 PHACTR1Q9C0D0 580 aa13.25□□□□□ -0.29
PRPF4-202ENST00000374199 TMBIM4Q9HC24 238 aa13.25□□□□□ -0.29
PRPF4-202ENST00000374199 PIN4Q9Y237 131 aaKnown RBP13.25□□□□□ -0.29
PRPF4-202ENST00000374199 PLXNA3P51805 1871 aa13.25□□□□□ -0.29
PRPF4-202ENST00000374199 ITGAVP06756 1048 aa13.24□□□□□ -0.29
PRPF4-202ENST00000374199 TFDP3Q5H9I0 405 aa13.24□□□□□ -0.29
PRPF4-202ENST00000374199 FAM43BQ6ZT52 329 aaPredicted RBP13.24□□□□□ -0.29
PRPF4-202ENST00000374199 ATL2Q8NHH9 583 aa13.24□□□□□ -0.29
PRPF4-202ENST00000374199 GRK7Q8WTQ7 553 aa13.24□□□□□ -0.29
PRPF4-202ENST00000374199 CDY2AQ9Y6F7 541 aa13.24□□□□□ -0.29
PRPF4-202ENST00000374199 KPNA7A9QM74 516 aa13.24□□□□□ -0.29
PRPF4-202ENST00000374199 XPOTO43592 962 aaKnown RBP13.24□□□□□ -0.29
PRPF4-202ENST00000374199 OPA1O60313 960 aa13.24□□□□□ -0.29
PRPF4-202ENST00000374199 ECEL1O95672 775 aa13.24□□□□□ -0.29
PRPF4-202ENST00000374199 ATF7P17544 494 aaPredicted RBP13.24□□□□□ -0.29
PRPF4-202ENST00000374199 ZNF844Q08AG5 666 aa13.24□□□□□ -0.29
PRPF4-202ENST00000374199 TEKT4Q8WW24 435 aa13.24□□□□□ -0.29
PRPF4-202ENST00000374199 GDAP1L1Q96MZ0 367 aa13.24□□□□□ -0.29
PRPF4-202ENST00000374199 FMO2Q99518 471 aa13.24□□□□□ -0.29
PRPF4-202ENST00000374199 FAM170AA1A519 330 aa13.24□□□□□ -0.29
PRPF4-202ENST00000374199 M0QYV0 167 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms