RNA–Protein interactions for RNA: ENST00000373888.8

SMPDL3B-201, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMPDL3B, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-201ENST00000373888 PALB2Q86YC2 1186 aa15.53■□□□□ 0.08
SMPDL3B-201ENST00000373888 REXO1L1PQ8IX06 675 aa15.53■□□□□ 0.08
SMPDL3B-201ENST00000373888 RIN2Q8WYP3 895 aaPredicted RBP15.53■□□□□ 0.08
SMPDL3B-201ENST00000373888 CYFIP2Q96F07 1278 aa15.53■□□□□ 0.08
SMPDL3B-201ENST00000373888 TMEM209Q96SK2 561 aa15.53■□□□□ 0.08
SMPDL3B-201ENST00000373888 EIF3CQ99613 913 aaKnown RBP15.53■□□□□ 0.08
SMPDL3B-201ENST00000373888 HNRNPABQ99729 332 aaKnown RBP15.53■□□□□ 0.08
SMPDL3B-201ENST00000373888 C11orf84Q9BUA3 381 aaPredicted RBP15.53■□□□□ 0.08
SMPDL3B-201ENST00000373888 ZBP1Q9H171 429 aa15.53■□□□□ 0.08
SMPDL3B-201ENST00000373888 LHX5Q9H2C1 402 aa15.53■□□□□ 0.08
SMPDL3B-201ENST00000373888 MSRAQ9UJ68 235 aa15.53■□□□□ 0.08
SMPDL3B-201ENST00000373888 NAGPAQ9UK23 515 aa15.53■□□□□ 0.08
SMPDL3B-201ENST00000373888 GTF3C4Q9UKN8 822 aa15.53■□□□□ 0.08
SMPDL3B-201ENST00000373888 TSPAN16Q9UKR8 245 aa15.53■□□□□ 0.08
SMPDL3B-201ENST00000373888 PDE4DIPQ5VU43 2346 aa15.52■□□□□ 0.08
SMPDL3B-201ENST00000373888 UQCRHLA0A096LP55 91 aa15.52■□□□□ 0.07
SMPDL3B-201ENST00000373888 LSM8O95777 96 aaKnown RBP15.52■□□□□ 0.07
SMPDL3B-201ENST00000373888 CYP1A1P04798 512 aaPredicted RBP15.52■□□□□ 0.07
SMPDL3B-201ENST00000373888 UQCRHP07919 91 aa15.52■□□□□ 0.07
SMPDL3B-201ENST00000373888 GZMAP12544 262 aa15.52■□□□□ 0.07
SMPDL3B-201ENST00000373888 CCDC130P13994 396 aa15.52■□□□□ 0.07
SMPDL3B-201ENST00000373888 CDH5P33151 784 aaPredicted RBP15.52■□□□□ 0.07
SMPDL3B-201ENST00000373888 ETF1P62495 437 aaKnown RBP15.52■□□□□ 0.07
SMPDL3B-201ENST00000373888 UBE3AQ05086 875 aa15.52■□□□□ 0.07
SMPDL3B-201ENST00000373888 CCDC142Q17RM4 750 aa15.52■□□□□ 0.07
SMPDL3B-201ENST00000373888 SLC8B1Q6J4K2 584 aa15.52■□□□□ 0.07
SMPDL3B-201ENST00000373888 CHRDL2Q6WN34 429 aa15.52■□□□□ 0.07
SMPDL3B-201ENST00000373888 SPRED2Q7Z698 418 aa15.52■□□□□ 0.07
SMPDL3B-201ENST00000373888 LRRTM3Q86VH5 581 aa15.52■□□□□ 0.07
SMPDL3B-201ENST00000373888 DCP1BQ8IZD4 617 aaKnown RBP15.52■□□□□ 0.07
SMPDL3B-201ENST00000373888 FUKQ8N0W3 1084 aa15.52■□□□□ 0.07
SMPDL3B-201ENST00000373888 SLC2A14Q8TDB8 520 aa15.52■□□□□ 0.07
SMPDL3B-201ENST00000373888 PCED1BQ96HM7 432 aa15.52■□□□□ 0.07
SMPDL3B-201ENST00000373888 PDCL3Q9H2J4 239 aa15.52■□□□□ 0.07
SMPDL3B-201ENST00000373888 SEPT11Q9NVA2 429 aaKnown RBP15.52■□□□□ 0.07
SMPDL3B-201ENST00000373888 LAMA2P24043 3122 aaKnown RBP15.51■□□□□ 0.07
SMPDL3B-201ENST00000373888 DYNC1I1O14576 645 aa15.51■□□□□ 0.07
SMPDL3B-201ENST00000373888 ZNF263O14978 683 aa15.51■□□□□ 0.07
SMPDL3B-201ENST00000373888 MICAL2O94851 1124 aa15.51■□□□□ 0.07
SMPDL3B-201ENST00000373888 CTSAP10619 480 aa15.51■□□□□ 0.07
SMPDL3B-201ENST00000373888 UNGP13051 313 aaPredicted RBP15.51■□□□□ 0.07
SMPDL3B-201ENST00000373888 CLEC16AQ2KHT3 1053 aa15.51■□□□□ 0.07
SMPDL3B-201ENST00000373888 GOLGA7BQ2TAP0 167 aa15.51■□□□□ 0.07
SMPDL3B-201ENST00000373888 PKDCCQ504Y2 493 aa15.51■□□□□ 0.07
SMPDL3B-201ENST00000373888 ALKBH5Q6P6C2 394 aaKnown RBP15.51■□□□□ 0.07
SMPDL3B-201ENST00000373888 RSPO2Q6UXX9 243 aaPredicted RBP15.51■□□□□ 0.07
SMPDL3B-201ENST00000373888 TOGARAM2Q6ZUX3 1019 aa15.51■□□□□ 0.07
SMPDL3B-201ENST00000373888 PAQR9Q6ZVX9 377 aa15.51■□□□□ 0.07
SMPDL3B-201ENST00000373888 SPPL3Q8TCT6 385 aa15.51■□□□□ 0.07
SMPDL3B-201ENST00000373888 MYLPFQ96A32 169 aa15.51■□□□□ 0.07
SMPDL3B-201ENST00000373888 B3GNT5Q9BYG0 378 aa15.51■□□□□ 0.07
SMPDL3B-201ENST00000373888 ZNF518BQ9C0D4 1074 aa15.51■□□□□ 0.07
SMPDL3B-201ENST00000373888 NKX2-4Q9H2Z4 354 aa15.51■□□□□ 0.07
SMPDL3B-201ENST00000373888 TMLHEQ9NVH6 421 aa15.51■□□□□ 0.07
SMPDL3B-201ENST00000373888 HESX1Q9UBX0 185 aa15.51■□□□□ 0.07
SMPDL3B-201ENST00000373888 SSX2IPQ9Y2D8 614 aa15.51■□□□□ 0.07
SMPDL3B-201ENST00000373888 ADGRG1Q9Y653 693 aa15.51■□□□□ 0.07
SMPDL3B-201ENST00000373888 PLXNA4Q9HCM2 1894 aa15.5■□□□□ 0.07
SMPDL3B-201ENST00000373888 M0QYV0 167 aa15.5■□□□□ 0.07
SMPDL3B-201ENST00000373888 LILRB3O75022 631 aa15.5■□□□□ 0.07
SMPDL3B-201ENST00000373888 OR4Q2P0C623 313 aa15.5■□□□□ 0.07
SMPDL3B-201ENST00000373888 ADORA2BP29275 332 aa15.5■□□□□ 0.07
SMPDL3B-201ENST00000373888 SSTR3P32745 418 aaPredicted RBP15.5■□□□□ 0.07
SMPDL3B-201ENST00000373888 NOMO3P69849 1222 aa15.5■□□□□ 0.07
SMPDL3B-201ENST00000373888 SMAD3P84022 425 aaKnown RBP15.5■□□□□ 0.07
SMPDL3B-201ENST00000373888 CREMQ03060 361 aa15.5■□□□□ 0.07
SMPDL3B-201ENST00000373888 CENPCQ03188 943 aa15.5■□□□□ 0.07
SMPDL3B-201ENST00000373888 SMARCB1Q12824 385 aa15.5■□□□□ 0.07
SMPDL3B-201ENST00000373888 GPR17Q13304 367 aa15.5■□□□□ 0.07
SMPDL3B-201ENST00000373888 SPA17Q15506 151 aa15.5■□□□□ 0.07
SMPDL3B-201ENST00000373888 NFE2Q16621 373 aaPredicted RBP15.5■□□□□ 0.07
SMPDL3B-201ENST00000373888 DENND1BQ6P3S1 775 aa15.5■□□□□ 0.07
SMPDL3B-201ENST00000373888 C4orf50Q6ZRC1 276 aa15.5■□□□□ 0.07
SMPDL3B-201ENST00000373888 TTC30AQ86WT1 665 aa15.5■□□□□ 0.07
SMPDL3B-201ENST00000373888 PASD1Q8IV76 773 aa15.5■□□□□ 0.07
SMPDL3B-201ENST00000373888 ANKRD52Q8NB46 1076 aa15.5■□□□□ 0.07
SMPDL3B-201ENST00000373888 TMEM35BQ8NCS4 154 aa15.5■□□□□ 0.07
SMPDL3B-201ENST00000373888 FBXO22Q8NEZ5 403 aa15.5■□□□□ 0.07
SMPDL3B-201ENST00000373888 ALG13Q9NP73 1137 aaKnown RBP15.5■□□□□ 0.07
SMPDL3B-201ENST00000373888 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.5■□□□□ 0.07
SMPDL3B-201ENST00000373888 MRPL17Q9NRX2 175 aaKnown RBP15.5■□□□□ 0.07
SMPDL3B-201ENST00000373888 MTUS1Q9ULD2 1270 aa15.5■□□□□ 0.07
SMPDL3B-201ENST00000373888 CEP83Q9Y592 693 aa15.5■□□□□ 0.07
SMPDL3B-201ENST00000373888 CDY1Q9Y6F8 540 aa15.5■□□□□ 0.07
SMPDL3B-201ENST00000373888 C2CD2LO14523 706 aa15.49■□□□□ 0.07
SMPDL3B-201ENST00000373888 IPO7O95373 1038 aaKnown RBP15.49■□□□□ 0.07
SMPDL3B-201ENST00000373888 GPD2P43304 727 aa15.49■□□□□ 0.07
SMPDL3B-201ENST00000373888 BCAT1P54687 386 aa15.49■□□□□ 0.07
SMPDL3B-201ENST00000373888 KRT83P78385 493 aa15.49■□□□□ 0.07
SMPDL3B-201ENST00000373888 CYP27A1Q02318 531 aa15.49■□□□□ 0.07
SMPDL3B-201ENST00000373888 CFAP221Q4G0U5 840 aa15.49■□□□□ 0.07
SMPDL3B-201ENST00000373888 SLC39A12Q504Y0 691 aa15.49■□□□□ 0.07
SMPDL3B-201ENST00000373888 CCDC122Q5T0U0 273 aa15.49■□□□□ 0.07
SMPDL3B-201ENST00000373888 C10orf76Q5T2E6 689 aa15.49■□□□□ 0.07
SMPDL3B-201ENST00000373888 PPP2R2DQ66LE6 453 aa15.49■□□□□ 0.07
SMPDL3B-201ENST00000373888 PPP1R2P3Q6NXS1 205 aa15.49■□□□□ 0.07
SMPDL3B-201ENST00000373888 FAM35AQ86V20 835 aa15.49■□□□□ 0.07
SMPDL3B-201ENST00000373888 WDTC1Q8N5D0 677 aa15.49■□□□□ 0.07
SMPDL3B-201ENST00000373888 C1orf131Q8NDD1 294 aaKnown RBP15.49■□□□□ 0.07
SMPDL3B-201ENST00000373888 ACRBPQ8NEB7 543 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms