RNA–Protein interactions for RNA: ENST00000373839.7

PHACTR4-202, Transcript of phosphatase and actin regulator 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHACTR4, Length 6,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-202ENST00000373839 H2AFY2Q9P0M6 372 aaPredicted RBP11.54□□□□□ -0.56
PHACTR4-202ENST00000373839 CEMIPQ8WUJ3 1361 aa11.54□□□□□ -0.56
PHACTR4-202ENST00000373839 TTLL13PA6NNM8 815 aa11.54□□□□□ -0.56
PHACTR4-202ENST00000373839 LZTS3O60299 673 aaPredicted RBP11.54□□□□□ -0.56
PHACTR4-202ENST00000373839 VPS26AO75436 327 aa11.54□□□□□ -0.56
PHACTR4-202ENST00000373839 FGFR4P22455 802 aa11.54□□□□□ -0.56
PHACTR4-202ENST00000373839 AXLP30530 894 aa11.54□□□□□ -0.56
PHACTR4-202ENST00000373839 POU4F1Q01851 419 aa11.54□□□□□ -0.56
PHACTR4-202ENST00000373839 NR1I3Q14994 352 aa11.54□□□□□ -0.56
PHACTR4-202ENST00000373839 SH2D3AQ9BRG2 576 aa11.54□□□□□ -0.56
PHACTR4-202ENST00000373839 SMARCAL1Q9NZC9 954 aa11.54□□□□□ -0.56
PHACTR4-202ENST00000373839 ABCA9Q8IUA7 1624 aa11.54□□□□□ -0.56
PHACTR4-202ENST00000373839 M0QYT0 321 aa11.54□□□□□ -0.56
PHACTR4-202ENST00000373839 ALOX15P16050 662 aaPredicted RBP11.54□□□□□ -0.56
PHACTR4-202ENST00000373839 ACO1P21399 889 aaKnown RBP11.54□□□□□ -0.56
PHACTR4-202ENST00000373839 AVPR1AP37288 418 aa11.54□□□□□ -0.56
PHACTR4-202ENST00000373839 TGM3Q08188 693 aa11.54□□□□□ -0.56
PHACTR4-202ENST00000373839 TROAPQ12815 778 aa11.54□□□□□ -0.56
PHACTR4-202ENST00000373839 Q4G0T1 1027 aa11.54□□□□□ -0.56
PHACTR4-202ENST00000373839 PRAMEF18Q5VWM3 479 aa11.54□□□□□ -0.56
PHACTR4-202ENST00000373839 JAMLQ86YT9 394 aa11.54□□□□□ -0.56
PHACTR4-202ENST00000373839 WDR49Q8IV35 697 aa11.54□□□□□ -0.56
PHACTR4-202ENST00000373839 ZNF669Q96BR6 464 aaPredicted RBP11.54□□□□□ -0.56
PHACTR4-202ENST00000373839 WDR41Q9HAD4 459 aa11.54□□□□□ -0.56
PHACTR4-202ENST00000373839 VTA1Q9NP79 307 aa11.54□□□□□ -0.56
PHACTR4-202ENST00000373839 SFMBT1Q9UHJ3 866 aa11.54□□□□□ -0.56
PHACTR4-202ENST00000373839 DBR1Q9UK59 544 aaKnown RBP11.54□□□□□ -0.56
PHACTR4-202ENST00000373839 MTO1Q9Y2Z2 717 aaKnown RBP11.54□□□□□ -0.56
PHACTR4-202ENST00000373839 NCAM2O15394 837 aa11.54□□□□□ -0.56
PHACTR4-202ENST00000373839 NPM3O75607 178 aaKnown RBP11.54□□□□□ -0.56
PHACTR4-202ENST00000373839 MAPTP10636 758 aaKnown RBP11.54□□□□□ -0.56
PHACTR4-202ENST00000373839 NBPF20Q3BBV1 942 aa11.54□□□□□ -0.56
PHACTR4-202ENST00000373839 AGAP9Q5VTM2 703 aa11.54□□□□□ -0.56
PHACTR4-202ENST00000373839 HS6ST3Q8IZP7 471 aa11.54□□□□□ -0.56
PHACTR4-202ENST00000373839 SLC25A41Q8N5S1 370 aa11.54□□□□□ -0.56
PHACTR4-202ENST00000373839 OSCP1Q8WVF1 389 aa11.54□□□□□ -0.56
PHACTR4-202ENST00000373839 HES6Q96HZ4 224 aa11.54□□□□□ -0.56
PHACTR4-202ENST00000373839 UBE2OQ9C0C9 1292 aaKnown RBP11.54□□□□□ -0.56
PHACTR4-202ENST00000373839 ALG6Q9Y672 507 aa11.54□□□□□ -0.56
PHACTR4-202ENST00000373839 RAP1GDS1P52306 607 aa11.53□□□□□ -0.56
PHACTR4-202ENST00000373839 UNC45BQ8IWX7 931 aa11.53□□□□□ -0.56
PHACTR4-202ENST00000373839 SUGP1Q8IWZ8 645 aaKnown RBP11.53□□□□□ -0.56
PHACTR4-202ENST00000373839 NRXN1Q9ULB1 1477 aa11.53□□□□□ -0.56
PHACTR4-202ENST00000373839 MADDQ8WXG6 1647 aa11.53□□□□□ -0.56
PHACTR4-202ENST00000373839 FAM205CA6NFA0 338 aa11.53□□□□□ -0.56
PHACTR4-202ENST00000373839 H0Y3Z8 333 aa11.53□□□□□ -0.56
PHACTR4-202ENST00000373839 CYB561D2O14569 222 aa11.53□□□□□ -0.56
PHACTR4-202ENST00000373839 GSNP06396 782 aa11.53□□□□□ -0.56
PHACTR4-202ENST00000373839 SLC9A1P19634 815 aa11.53□□□□□ -0.56
PHACTR4-202ENST00000373839 PGM1P36871 562 aa11.53□□□□□ -0.56
PHACTR4-202ENST00000373839 RENBPP51606 427 aa11.53□□□□□ -0.56
PHACTR4-202ENST00000373839 MCL1Q07820 350 aa11.53□□□□□ -0.56
PHACTR4-202ENST00000373839 NT5DC4Q86YG4 428 aa11.53□□□□□ -0.56
PHACTR4-202ENST00000373839 ADGRF2Q8IZF7 708 aa11.53□□□□□ -0.56
PHACTR4-202ENST00000373839 UBA3Q8TBC4 463 aa11.53□□□□□ -0.56
PHACTR4-202ENST00000373839 FAM167BQ9BTA0 163 aa11.53□□□□□ -0.56
PHACTR4-202ENST00000373839 CHST12Q9NRB3 414 aa11.53□□□□□ -0.56
PHACTR4-202ENST00000373839 WWOXQ9NZC7 414 aa11.53□□□□□ -0.56
PHACTR4-202ENST00000373839 SYNPO2Q9UMS6 1093 aa11.53□□□□□ -0.56
PHACTR4-202ENST00000373839 TRAF3IP3Q9Y228 551 aa11.53□□□□□ -0.56
PHACTR4-202ENST00000373839 CDC42BPAQ5VT25 1732 aa11.53□□□□□ -0.56
PHACTR4-202ENST00000373839 SALL1Q9NSC2 1324 aa11.53□□□□□ -0.56
PHACTR4-202ENST00000373839 IGF2BP3O00425 579 aaKnown RBP eCLIP11.53□□□□□ -0.56
PHACTR4-202ENST00000373839 APOA1P02647 267 aa11.53□□□□□ -0.56
PHACTR4-202ENST00000373839 SSTR3P32745 418 aaPredicted RBP11.53□□□□□ -0.56
PHACTR4-202ENST00000373839 MAGEA4P43358 317 aa11.53□□□□□ -0.56
PHACTR4-202ENST00000373839 MAGEA9P43362 315 aa11.53□□□□□ -0.56
PHACTR4-202ENST00000373839 ITGA9Q13797 1035 aa11.53□□□□□ -0.56
PHACTR4-202ENST00000373839 ZKSCAN4Q969J2 545 aaPredicted RBP11.53□□□□□ -0.56
PHACTR4-202ENST00000373839 THG1LQ9NWX6 298 aaKnown RBP11.53□□□□□ -0.56
PHACTR4-202ENST00000373839 C6orf203Q9P0P8 240 aaPredicted RBP11.53□□□□□ -0.56
PHACTR4-202ENST00000373839 TIMM44O43615 452 aa11.53□□□□□ -0.56
PHACTR4-202ENST00000373839 MAN1A2O60476 641 aa11.53□□□□□ -0.56
PHACTR4-202ENST00000373839 BRD2P25440 801 aaKnown RBP11.53□□□□□ -0.56
PHACTR4-202ENST00000373839 GRK3P35626 688 aa11.53□□□□□ -0.56
PHACTR4-202ENST00000373839 POLE2P56282 527 aa11.53□□□□□ -0.56
PHACTR4-202ENST00000373839 CNTN1Q12860 1018 aa11.53□□□□□ -0.56
PHACTR4-202ENST00000373839 STARD3Q14849 445 aa11.53□□□□□ -0.56
PHACTR4-202ENST00000373839 AGGF1Q8N302 714 aaeCLIP11.53□□□□□ -0.56
PHACTR4-202ENST00000373839 SKA1Q96BD8 255 aa11.53□□□□□ -0.56
PHACTR4-202ENST00000373839 KIAA1683Q9H0B3 1180 aa11.53□□□□□ -0.56
PHACTR4-202ENST00000373839 MLXIPLQ9NP71 852 aa11.53□□□□□ -0.56
PHACTR4-202ENST00000373839 KRCC1Q9NPI7 259 aaPredicted RBP11.53□□□□□ -0.56
PHACTR4-202ENST00000373839 TUBGCP4Q9UGJ1 667 aa11.53□□□□□ -0.56
PHACTR4-202ENST00000373839 RASSF10A6NK89 507 aa11.53□□□□□ -0.56
PHACTR4-202ENST00000373839 RSPH10B2B2RC85 870 aa11.53□□□□□ -0.56
PHACTR4-202ENST00000373839 GRAP2O75791 330 aa11.53□□□□□ -0.56
PHACTR4-202ENST00000373839 RSPH10BP0C881 870 aa11.53□□□□□ -0.56
PHACTR4-202ENST00000373839 DMC1Q14565 340 aa11.53□□□□□ -0.56
PHACTR4-202ENST00000373839 TRIM69Q86WT6 500 aa11.53□□□□□ -0.56
PHACTR4-202ENST00000373839 PRMT6Q96LA8 375 aaPredicted RBP11.53□□□□□ -0.56
PHACTR4-202ENST00000373839 BRD8Q9H0E9 1235 aa11.53□□□□□ -0.56
PHACTR4-202ENST00000373839 ITGA11Q9UKX5 1188 aa11.53□□□□□ -0.56
PHACTR4-202ENST00000373839 CHMP2BQ9UQN3 213 aa11.53□□□□□ -0.56
PHACTR4-202ENST00000373839 CRTAMO95727 393 aa11.52□□□□□ -0.56
PHACTR4-202ENST00000373839 GZMAP12544 262 aa11.52□□□□□ -0.56
PHACTR4-202ENST00000373839 LRRC74AQ0VAA2 488 aa11.52□□□□□ -0.56
PHACTR4-202ENST00000373839 RETSATQ6NUM9 610 aa11.52□□□□□ -0.56
PHACTR4-202ENST00000373839 C1orf131Q8NDD1 294 aaKnown RBP11.52□□□□□ -0.56
PHACTR4-202ENST00000373839 EIF3LQ9Y262 564 aaKnown RBP11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms