RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 CCDC142Q17RM4 750 aa14.79□□□□□ -0.04
LMX1B-202ENST00000373474 CENPPQ6IPU0 288 aa14.79□□□□□ -0.04
LMX1B-202ENST00000373474 FASTKD5Q7L8L6 764 aaKnown RBP14.79□□□□□ -0.04
LMX1B-202ENST00000373474 SZRD1Q7Z422 152 aa14.79□□□□□ -0.04
LMX1B-202ENST00000373474 ARHGEF38Q9NXL2 777 aa14.79□□□□□ -0.04
LMX1B-202ENST00000373474 ARHGEF28Q8N1W1 1705 aaKnown RBP14.79□□□□□ -0.04
LMX1B-202ENST00000373474 TECPR2O15040 1411 aa14.79□□□□□ -0.04
LMX1B-202ENST00000373474 TRIM71Q2Q1W2 868 aaKnown RBP14.79□□□□□ -0.04
LMX1B-202ENST00000373474 TNIP2Q8NFZ5 429 aa14.79□□□□□ -0.04
LMX1B-202ENST00000373474 PTPRN2Q92932 1015 aa14.79□□□□□ -0.04
LMX1B-202ENST00000373474 CD248Q9HCU0 757 aa14.79□□□□□ -0.04
LMX1B-202ENST00000373474 ARHGAP20Q9P2F6 1191 aa14.79□□□□□ -0.04
LMX1B-202ENST00000373474 DCDC2Q9UHG0 476 aa14.79□□□□□ -0.04
LMX1B-202ENST00000373474 PIN4Q9Y237 131 aaKnown RBP14.79□□□□□ -0.04
LMX1B-202ENST00000373474 ENO3P13929 434 aaPredicted RBP14.79□□□□□ -0.04
LMX1B-202ENST00000373474 ANO4Q32M45 955 aa14.79□□□□□ -0.04
LMX1B-202ENST00000373474 KHDRBS2Q5VWX1 349 aaKnown RBP14.79□□□□□ -0.04
LMX1B-202ENST00000373474 OR6J1Q8NGC5 347 aa14.79□□□□□ -0.04
LMX1B-202ENST00000373474 ZBTB10Q96DT7 871 aa14.79□□□□□ -0.04
LMX1B-202ENST00000373474 AGLP35573 1532 aa14.78□□□□□ -0.04
LMX1B-202ENST00000373474 RECQLP46063 649 aaPredicted RBP14.78□□□□□ -0.04
LMX1B-202ENST00000373474 SCTRP47872 440 aa14.78□□□□□ -0.04
LMX1B-202ENST00000373474 VCPP55072 806 aaKnown RBP14.78□□□□□ -0.04
LMX1B-202ENST00000373474 TP53BP2Q13625 1128 aa14.78□□□□□ -0.04
LMX1B-202ENST00000373474 MICU2Q8IYU8 434 aa14.78□□□□□ -0.04
LMX1B-202ENST00000373474 SIKE1Q9BRV8 207 aa14.78□□□□□ -0.04
LMX1B-202ENST00000373474 KCND1Q9NSA2 647 aa14.78□□□□□ -0.04
LMX1B-202ENST00000373474 C20orf96Q9NUD7 363 aaPredicted RBP14.78□□□□□ -0.04
LMX1B-202ENST00000373474 ZNRF3Q9ULT6 936 aa14.78□□□□□ -0.04
LMX1B-202ENST00000373474 TARSP26639 723 aaKnown RBP14.78□□□□□ -0.04
LMX1B-202ENST00000373474 BBS7Q8IWZ6 715 aa14.78□□□□□ -0.04
LMX1B-202ENST00000373474 OMA1Q96E52 524 aa14.78□□□□□ -0.04
LMX1B-202ENST00000373474 KLHL31Q9H511 634 aa14.78□□□□□ -0.04
LMX1B-202ENST00000373474 NDFIP2Q9NV92 336 aa14.78□□□□□ -0.04
LMX1B-202ENST00000373474 XPO1O14980 1071 aaKnown RBP14.78□□□□□ -0.04
LMX1B-202ENST00000373474 RARGP13631 454 aa14.78□□□□□ -0.04
LMX1B-202ENST00000373474 EZH2Q15910 746 aaKnown RBP14.78□□□□□ -0.04
LMX1B-202ENST00000373474 LRRC36Q1X8D7 754 aa14.78□□□□□ -0.04
LMX1B-202ENST00000373474 C2orf69Q8N8R5 385 aa14.78□□□□□ -0.04
LMX1B-202ENST00000373474 LACRTQ9GZZ8 138 aa14.78□□□□□ -0.04
LMX1B-202ENST00000373474 CDY2AQ9Y6F7 541 aa14.78□□□□□ -0.04
LMX1B-202ENST00000373474 CDY1Q9Y6F8 540 aa14.78□□□□□ -0.04
LMX1B-202ENST00000373474 AK9Q5TCS8 1911 aa14.78□□□□□ -0.04
LMX1B-202ENST00000373474 CAND2O75155 1236 aa14.78□□□□□ -0.04
LMX1B-202ENST00000373474 ERFP50548 548 aa14.78□□□□□ -0.04
LMX1B-202ENST00000373474 PDAP1Q13442 181 aaKnown RBP14.78□□□□□ -0.04
LMX1B-202ENST00000373474 KRT33BQ14525 404 aa14.78□□□□□ -0.04
LMX1B-202ENST00000373474 ZNF571Q7Z3V5 609 aaPredicted RBP14.78□□□□□ -0.04
LMX1B-202ENST00000373474 GPRASP2Q96D09 838 aa14.78□□□□□ -0.04
LMX1B-202ENST00000373474 LMCD1Q9NZU5 365 aa14.78□□□□□ -0.04
LMX1B-202ENST00000373474 RAB21Q9UL25 225 aa14.78□□□□□ -0.04
LMX1B-202ENST00000373474 FAM205AQ6ZU69 1335 aa14.78□□□□□ -0.04
LMX1B-202ENST00000373474 O00370 1275 aa14.77□□□□□ -0.04
LMX1B-202ENST00000373474 CD4P01730 458 aa14.77□□□□□ -0.04
LMX1B-202ENST00000373474 RALBP11234 206 aa14.77□□□□□ -0.04
LMX1B-202ENST00000373474 GRIK1P39086 918 aa14.77□□□□□ -0.04
LMX1B-202ENST00000373474 DNAJC3Q13217 504 aa14.77□□□□□ -0.04
LMX1B-202ENST00000373474 IER5Q5VY09 327 aa14.77□□□□□ -0.04
LMX1B-202ENST00000373474 TTC33Q6PID6 262 aaPredicted RBP14.77□□□□□ -0.04
LMX1B-202ENST00000373474 SPATA2LQ8IUW3 424 aaPredicted RBP14.77□□□□□ -0.04
LMX1B-202ENST00000373474 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.77□□□□□ -0.04
LMX1B-202ENST00000373474 RMDN1Q96DB5 314 aa14.77□□□□□ -0.04
LMX1B-202ENST00000373474 AGBL1Q96MI9 1066 aa14.77□□□□□ -0.04
LMX1B-202ENST00000373474 VPS33BQ9H267 617 aa14.77□□□□□ -0.04
LMX1B-202ENST00000373474 KDELC2Q7Z4H8 507 aa14.77□□□□□ -0.04
LMX1B-202ENST00000373474 ILDR1Q86SU0 546 aaPredicted RBP14.77□□□□□ -0.04
LMX1B-202ENST00000373474 C1orf131Q8NDD1 294 aaKnown RBP14.77□□□□□ -0.04
LMX1B-202ENST00000373474 UBA3Q8TBC4 463 aa14.77□□□□□ -0.04
LMX1B-202ENST00000373474 SCFD1Q8WVM8 642 aa14.77□□□□□ -0.04
LMX1B-202ENST00000373474 CASS4Q9NQ75 786 aa14.77□□□□□ -0.04
LMX1B-202ENST00000373474 CES2O00748 559 aa14.77□□□□□ -0.04
LMX1B-202ENST00000373474 MAGEB2O15479 319 aa14.77□□□□□ -0.04
LMX1B-202ENST00000373474 TLR2O60603 784 aa14.77□□□□□ -0.04
LMX1B-202ENST00000373474 GRAP2O75791 330 aa14.77□□□□□ -0.04
LMX1B-202ENST00000373474 RBP3P10745 1247 aa14.77□□□□□ -0.04
LMX1B-202ENST00000373474 TCF3P15923 654 aa14.77□□□□□ -0.04
LMX1B-202ENST00000373474 SOX6P35712 828 aa14.77□□□□□ -0.04
LMX1B-202ENST00000373474 SREBF1P36956 1147 aa14.77□□□□□ -0.04
LMX1B-202ENST00000373474 GJD4Q96KN9 370 aaPredicted RBP14.77□□□□□ -0.04
LMX1B-202ENST00000373474 FAM32AQ9Y421 112 aaKnown RBP14.77□□□□□ -0.04
LMX1B-202ENST00000373474 CHRNA5P30532 468 aa14.77□□□□□ -0.05
LMX1B-202ENST00000373474 TMC5Q6UXY8 1006 aa14.77□□□□□ -0.05
LMX1B-202ENST00000373474 ELMOD1Q8N336 334 aa14.77□□□□□ -0.05
LMX1B-202ENST00000373474 TRIM54Q9BYV2 358 aa14.77□□□□□ -0.05
LMX1B-202ENST00000373474 KRT87PA6NCN2 255 aa14.77□□□□□ -0.05
LMX1B-202ENST00000373474 F8VZ95 297 aa14.77□□□□□ -0.05
LMX1B-202ENST00000373474 ST13P5Q8NFI4 369 aaPredicted RBP14.77□□□□□ -0.05
LMX1B-202ENST00000373474 ATP8B4Q8TF62 1192 aa14.77□□□□□ -0.05
LMX1B-202ENST00000373474 MMTAG2Q9BU76 263 aaKnown RBP14.77□□□□□ -0.05
LMX1B-202ENST00000373474 BBS2Q9BXC9 721 aa14.77□□□□□ -0.05
LMX1B-202ENST00000373474 AIM2O14862 343 aa14.76□□□□□ -0.05
LMX1B-202ENST00000373474 ZC3H11AO75152 810 aaKnown RBP eCLIP14.76□□□□□ -0.05
LMX1B-202ENST00000373474 CYP11B1P15538 503 aa14.76□□□□□ -0.05
LMX1B-202ENST00000373474 INAQ16352 499 aa14.76□□□□□ -0.05
LMX1B-202ENST00000373474 RBM46Q8TBY0 533 aaKnown RBP14.76□□□□□ -0.05
LMX1B-202ENST00000373474 USP33Q8TEY7 942 aa14.76□□□□□ -0.05
LMX1B-202ENST00000373474 RSPH1Q8WYR4 309 aa14.76□□□□□ -0.05
LMX1B-202ENST00000373474 INPP5DQ92835 1189 aa14.76□□□□□ -0.05
LMX1B-202ENST00000373474 ABHD8Q96I13 439 aa14.76□□□□□ -0.05
LMX1B-202ENST00000373474 EPS8L2Q9H6S3 715 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms