RNA–Protein interactions for RNA: ENST00000373433.8

RPRD1B-201, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1B, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-201ENST00000373433 MAGEA13PA6NCF6 341 aa11.75□□□□□ -0.53
RPRD1B-201ENST00000373433 SOWAHBA6NEL2 793 aa11.75□□□□□ -0.53
RPRD1B-201ENST00000373433 HBP1O60381 514 aa11.75□□□□□ -0.53
RPRD1B-201ENST00000373433 CCNE2O96020 404 aa11.75□□□□□ -0.53
RPRD1B-201ENST00000373433 ATF2P15336 505 aa11.75□□□□□ -0.53
RPRD1B-201ENST00000373433 ABCD1P33897 745 aa11.75□□□□□ -0.53
RPRD1B-201ENST00000373433 SCNN1BP51168 640 aa11.75□□□□□ -0.53
RPRD1B-201ENST00000373433 ZBTB16Q05516 673 aa11.75□□□□□ -0.53
RPRD1B-201ENST00000373433 SPARCL1Q14515 664 aa11.75□□□□□ -0.53
RPRD1B-201ENST00000373433 DGKDQ16760 1214 aa11.75□□□□□ -0.53
RPRD1B-201ENST00000373433 PRAMEF19Q5SWL8 479 aa11.75□□□□□ -0.53
RPRD1B-201ENST00000373433 HHATQ5VTY9 493 aa11.75□□□□□ -0.53
RPRD1B-201ENST00000373433 C4orf50Q6ZRC1 276 aa11.75□□□□□ -0.53
RPRD1B-201ENST00000373433 NLRP9Q7RTR0 991 aa11.75□□□□□ -0.53
RPRD1B-201ENST00000373433 MBOAT7Q96N66 472 aa11.75□□□□□ -0.53
RPRD1B-201ENST00000373433 FAM118BQ9BPY3 351 aa11.75□□□□□ -0.53
RPRD1B-201ENST00000373433 PDGFCQ9NRA1 345 aa11.75□□□□□ -0.53
RPRD1B-201ENST00000373433 NINJ2Q9NZG7 142 aa11.75□□□□□ -0.53
RPRD1B-201ENST00000373433 ZNF394Q53GI3 561 aa11.75□□□□□ -0.53
RPRD1B-201ENST00000373433 C7orf31Q8N865 590 aa11.75□□□□□ -0.53
RPRD1B-201ENST00000373433 STK33Q9BYT3 514 aa11.75□□□□□ -0.53
RPRD1B-201ENST00000373433 OCEL1Q9H607 264 aa11.75□□□□□ -0.53
RPRD1B-201ENST00000373433 STARD13Q9Y3M8 1113 aa11.75□□□□□ -0.53
RPRD1B-201ENST00000373433 A0A0G2JND7 137 aa11.75□□□□□ -0.53
RPRD1B-201ENST00000373433 GYG2O15488 501 aa11.75□□□□□ -0.53
RPRD1B-201ENST00000373433 CHRNB2P17787 502 aa11.75□□□□□ -0.53
RPRD1B-201ENST00000373433 MXI1P50539 228 aa11.75□□□□□ -0.53
RPRD1B-201ENST00000373433 OVGP1Q12889 678 aa11.75□□□□□ -0.53
RPRD1B-201ENST00000373433 ARSHQ5FYA8 562 aa11.75□□□□□ -0.53
RPRD1B-201ENST00000373433 SPOUT1Q5T280 376 aaKnown RBP11.75□□□□□ -0.53
RPRD1B-201ENST00000373433 EFCAB12Q6NXP0 572 aa11.75□□□□□ -0.53
RPRD1B-201ENST00000373433 PDCD7Q8N8D1 485 aaKnown RBP11.75□□□□□ -0.53
RPRD1B-201ENST00000373433 VCX3BQ9H321 246 aa11.75□□□□□ -0.53
RPRD1B-201ENST00000373433 VCX3AQ9NNX9 186 aa11.75□□□□□ -0.53
RPRD1B-201ENST00000373433 VTA1Q9NP79 307 aa11.75□□□□□ -0.53
RPRD1B-201ENST00000373433 EXOC1LA0A1B0GW35 172 aa11.74□□□□□ -0.53
RPRD1B-201ENST00000373433 TMEM191BP0C7N4 346 aa11.74□□□□□ -0.53
RPRD1B-201ENST00000373433 GCLMP48507 274 aa11.74□□□□□ -0.53
RPRD1B-201ENST00000373433 MCL1Q07820 350 aa11.74□□□□□ -0.53
RPRD1B-201ENST00000373433 UGCGQ16739 394 aa11.74□□□□□ -0.53
RPRD1B-201ENST00000373433 KLHL23Q8NBE8 558 aa11.74□□□□□ -0.53
RPRD1B-201ENST00000373433 NRG4Q8WWG1 115 aa11.74□□□□□ -0.53
RPRD1B-201ENST00000373433 SNF8Q96H20 258 aa11.74□□□□□ -0.53
RPRD1B-201ENST00000373433 TRAF3IP3Q9Y228 551 aa11.74□□□□□ -0.53
RPRD1B-201ENST00000373433 UNCXA6NJT0 531 aa11.74□□□□□ -0.53
RPRD1B-201ENST00000373433 ZNF286BP0CG31 522 aa11.74□□□□□ -0.53
RPRD1B-201ENST00000373433 ACSBG2Q5FVE4 666 aa11.74□□□□□ -0.53
RPRD1B-201ENST00000373433 FYB2Q5VWT5 728 aa11.74□□□□□ -0.53
RPRD1B-201ENST00000373433 SLFN12LQ6IEE8 588 aa11.74□□□□□ -0.53
RPRD1B-201ENST00000373433 C1orf186Q6ZWK4 172 aa11.74□□□□□ -0.53
RPRD1B-201ENST00000373433 CATSPER4Q7RTX7 472 aa11.74□□□□□ -0.53
RPRD1B-201ENST00000373433 ZNF720Q7Z2F6 126 aa11.74□□□□□ -0.53
RPRD1B-201ENST00000373433 NXF1Q9UBU9 619 aaKnown RBP11.74□□□□□ -0.53
RPRD1B-201ENST00000373433 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.74□□□□□ -0.53
RPRD1B-201ENST00000373433 H3BRB1 525 aa11.74□□□□□ -0.53
RPRD1B-201ENST00000373433 FOXN3O00409 490 aaPredicted RBP11.74□□□□□ -0.53
RPRD1B-201ENST00000373433 EDIL3O43854 480 aa11.74□□□□□ -0.53
RPRD1B-201ENST00000373433 TBX10O75333 385 aa11.74□□□□□ -0.53
RPRD1B-201ENST00000373433 PHKA2P46019 1235 aa11.74□□□□□ -0.53
RPRD1B-201ENST00000373433 NPTX2P47972 431 aa11.74□□□□□ -0.53
RPRD1B-201ENST00000373433 TFAMQ00059 246 aaKnown RBP11.74□□□□□ -0.53
RPRD1B-201ENST00000373433 TMEM62Q0P6H9 643 aa11.74□□□□□ -0.53
RPRD1B-201ENST00000373433 HSDL1Q3SXM5 330 aa11.74□□□□□ -0.53
RPRD1B-201ENST00000373433 CMPK2Q5EBM0 449 aa11.74□□□□□ -0.53
RPRD1B-201ENST00000373433 RSPH3Q86UC2 560 aa11.74□□□□□ -0.53
RPRD1B-201ENST00000373433 MIPEPQ99797 713 aa11.74□□□□□ -0.53
RPRD1B-201ENST00000373433 CADM1Q9BY67 442 aaKnown RBP11.74□□□□□ -0.53
RPRD1B-201ENST00000373433 TUT1Q9H6E5 874 aaKnown RBP11.74□□□□□ -0.53
RPRD1B-201ENST00000373433 ADGRA3Q8IWK6 1321 aa11.73□□□□□ -0.53
RPRD1B-201ENST00000373433 KCNA2P16389 499 aa11.73□□□□□ -0.53
RPRD1B-201ENST00000373433 CLCN3P51790 818 aa11.73□□□□□ -0.53
RPRD1B-201ENST00000373433 GPC5P78333 572 aa11.73□□□□□ -0.53
RPRD1B-201ENST00000373433 SLC34A1Q06495 639 aa11.73□□□□□ -0.53
RPRD1B-201ENST00000373433 MXD4Q14582 209 aaPredicted RBP11.73□□□□□ -0.53
RPRD1B-201ENST00000373433 HYIQ5T013 277 aa11.73□□□□□ -0.53
RPRD1B-201ENST00000373433 SMC6Q96SB8 1091 aa11.73□□□□□ -0.53
RPRD1B-201ENST00000373433 AGPAT1Q99943 283 aa11.73□□□□□ -0.53
RPRD1B-201ENST00000373433 DMAP1Q9NPF5 467 aaPredicted RBP11.73□□□□□ -0.53
RPRD1B-201ENST00000373433 OLFML3Q9NRN5 406 aa11.73□□□□□ -0.53
RPRD1B-201ENST00000373433 CHST7Q9NS84 486 aa11.73□□□□□ -0.53
RPRD1B-201ENST00000373433 SLC15A5A6NIM6 579 aa11.73□□□□□ -0.53
RPRD1B-201ENST00000373433 EIF3DO15371 548 aaKnown RBP eCLIP11.73□□□□□ -0.53
RPRD1B-201ENST00000373433 GAS8O95995 478 aa11.73□□□□□ -0.53
RPRD1B-201ENST00000373433 ITIH2P19823 946 aa11.73□□□□□ -0.53
RPRD1B-201ENST00000373433 HOXD13P35453 343 aa11.73□□□□□ -0.53
RPRD1B-201ENST00000373433 GJA5P36382 358 aa11.73□□□□□ -0.53
RPRD1B-201ENST00000373433 FMO5P49326 533 aa11.73□□□□□ -0.53
RPRD1B-201ENST00000373433 CFAP157Q5JU67 520 aa11.73□□□□□ -0.53
RPRD1B-201ENST00000373433 CELF3Q5SZQ8 465 aaKnown RBP11.73□□□□□ -0.53
RPRD1B-201ENST00000373433 TRAPPC12Q8WVT3 735 aa11.73□□□□□ -0.53
RPRD1B-201ENST00000373433 CCDC97Q96F63 343 aaPredicted RBP11.73□□□□□ -0.53
RPRD1B-201ENST00000373433 CYTH2Q99418 400 aa11.73□□□□□ -0.53
RPRD1B-201ENST00000373433 INTS2Q9H0H0 1204 aaKnown RBP11.73□□□□□ -0.53
RPRD1B-201ENST00000373433 TRABDQ9H4I3 376 aa11.73□□□□□ -0.53
RPRD1B-201ENST00000373433 C1orf112Q9NSG2 853 aa11.73□□□□□ -0.53
RPRD1B-201ENST00000373433 WHRNQ9P202 907 aa11.73□□□□□ -0.53
RPRD1B-201ENST00000373433 ASTN1O14525 1302 aa11.73□□□□□ -0.53
RPRD1B-201ENST00000373433 FRMPD4Q14CM0 1322 aa11.73□□□□□ -0.53
RPRD1B-201ENST00000373433 BAG2O95816 211 aa11.73□□□□□ -0.53
RPRD1B-201ENST00000373433 MOGSQ13724 837 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms