RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 AMHR2Q16671 573 aa25.07■■□□□ 1.6
CDK9-201ENST00000373264 FAM133BQ5BKY9 247 aaKnown RBP25.07■■□□□ 1.6
CDK9-201ENST00000373264 SYCP2LQ5T4T6 812 aa25.07■■□□□ 1.6
CDK9-201ENST00000373264 RNASEH2BQ5TBB1 312 aaKnown RBP25.07■■□□□ 1.6
CDK9-201ENST00000373264 SAMD15Q9P1V8 674 aa25.07■■□□□ 1.6
CDK9-201ENST00000373264 SPDYE5A6NIY4 337 aa25.06■■□□□ 1.6
CDK9-201ENST00000373264 SIGLEC16A6NMB1 481 aa25.06■■□□□ 1.6
CDK9-201ENST00000373264 YWHAEP62258 255 aaKnown RBP25.06■■□□□ 1.6
CDK9-201ENST00000373264 TFDP1Q14186 410 aa25.06■■□□□ 1.6
CDK9-201ENST00000373264 SURF1Q15526 300 aa25.06■■□□□ 1.6
CDK9-201ENST00000373264 NIPA2Q8N8Q9 360 aa25.06■■□□□ 1.6
CDK9-201ENST00000373264 BBOF1Q8ND07 529 aa25.06■■□□□ 1.6
CDK9-201ENST00000373264 HSPH1Q92598 858 aa25.06■■□□□ 1.6
CDK9-201ENST00000373264 EXOC1LA0A1B0GW35 172 aa25.06■■□□□ 1.6
CDK9-201ENST00000373264 GAS2O43903 313 aaKnown RBP25.06■■□□□ 1.6
CDK9-201ENST00000373264 HBP1O60381 514 aa25.06■■□□□ 1.6
CDK9-201ENST00000373264 CDH16O75309 829 aa25.06■■□□□ 1.6
CDK9-201ENST00000373264 TCEA3O75764 348 aa25.06■■□□□ 1.6
CDK9-201ENST00000373264 MICAL2O94851 1124 aa25.06■■□□□ 1.6
CDK9-201ENST00000373264 MSS51Q4VC12 460 aa25.06■■□□□ 1.6
CDK9-201ENST00000373264 PPP1R2P3Q6NXS1 205 aa25.06■■□□□ 1.6
CDK9-201ENST00000373264 SLC35B2Q8TB61 432 aa25.06■■□□□ 1.6
CDK9-201ENST00000373264 MAML1Q92585 1016 aa25.06■■□□□ 1.6
CDK9-201ENST00000373264 CDCA5Q96FF9 252 aa25.06■■□□□ 1.6
CDK9-201ENST00000373264 PDZD7Q9H5P4 517 aa25.06■■□□□ 1.6
CDK9-201ENST00000373264 LGALS13Q9UHV8 139 aa25.06■■□□□ 1.6
CDK9-201ENST00000373264 TCRBV7S3A2A0A539 114 aa25.05■■□□□ 1.6
CDK9-201ENST00000373264 RASA4BC9J798 803 aa25.05■■□□□ 1.6
CDK9-201ENST00000373264 RASA4O43374 803 aa25.05■■□□□ 1.6
CDK9-201ENST00000373264 SNX3O60493 162 aa25.05■■□□□ 1.6
CDK9-201ENST00000373264 GRAP2O75791 330 aa25.05■■□□□ 1.6
CDK9-201ENST00000373264 POLR2BP30876 1174 aaKnown RBP25.05■■□□□ 1.6
CDK9-201ENST00000373264 GJA5P36382 358 aa25.05■■□□□ 1.6
CDK9-201ENST00000373264 MMRN1Q13201 1228 aa25.05■■□□□ 1.6
CDK9-201ENST00000373264 EFTUD2Q15029 972 aaKnown RBP eCLIP25.05■■□□□ 1.61e-6■■■■■ 29.4
CDK9-201ENST00000373264 SLC10A6Q3KNW5 377 aa25.05■■□□□ 1.6
CDK9-201ENST00000373264 VPS37BQ9H9H4 285 aa25.05■■□□□ 1.6
CDK9-201ENST00000373264 AKT3Q9Y243 479 aa25.05■■□□□ 1.6
CDK9-201ENST00000373264 M0QYV0 167 aa25.05■■□□□ 1.6
CDK9-201ENST00000373264 CYP3A5P20815 502 aa25.05■■□□□ 1.6
CDK9-201ENST00000373264 PTPN11Q06124 597 aaPredicted RBP25.05■■□□□ 1.6
CDK9-201ENST00000373264 ARHGAP1Q07960 439 aa25.05■■□□□ 1.6
CDK9-201ENST00000373264 PDIA2Q13087 525 aaKnown RBP25.05■■□□□ 1.6
CDK9-201ENST00000373264 TRNP1Q6NT89 227 aa25.05■■□□□ 1.6
CDK9-201ENST00000373264 DRICH1Q6PGQ1 229 aaPredicted RBP25.05■■□□□ 1.6
CDK9-201ENST00000373264 ARMCX2Q7L311 632 aa25.05■■□□□ 1.6
CDK9-201ENST00000373264 RELL1Q8IUW5 271 aa25.05■■□□□ 1.6
CDK9-201ENST00000373264 ANKRD13AQ8IZ07 590 aa25.05■■□□□ 1.6
CDK9-201ENST00000373264 PAIP2Q9BPZ3 127 aaKnown RBP25.05■■□□□ 1.6
CDK9-201ENST00000373264 SBF1O95248 1867 aa25.04■■□□□ 1.6
CDK9-201ENST00000373264 RASSF9O75901 435 aa25.04■■□□□ 1.6
CDK9-201ENST00000373264 ARF4P18085 180 aaPredicted RBP25.04■■□□□ 1.6
CDK9-201ENST00000373264 LMNB2Q03252 620 aa25.04■■□□□ 1.6
CDK9-201ENST00000373264 PKN2Q16513 984 aaKnown RBP25.04■■□□□ 1.6
CDK9-201ENST00000373264 PRCCQ92733 491 aaPredicted RBP25.04■■□□□ 1.6
CDK9-201ENST00000373264 NKD2Q969F2 451 aaPredicted RBP25.04■■□□□ 1.6
CDK9-201ENST00000373264 PEBP4Q96S96 227 aa25.04■■□□□ 1.6
CDK9-201ENST00000373264 RNF181Q9P0P0 153 aa25.04■■□□□ 1.6
CDK9-201ENST00000373264 LGALS2P05162 132 aa25.04■■□□□ 1.6
CDK9-201ENST00000373264 KDELR1P24390 212 aa25.04■■□□□ 1.6
CDK9-201ENST00000373264 FOXN2P32314 431 aa25.04■■□□□ 1.6
CDK9-201ENST00000373264 LACTB2Q53H82 288 aaPredicted RBP25.04■■□□□ 1.6
CDK9-201ENST00000373264 CGB2Q6NT52 195 aa25.04■■□□□ 1.6
CDK9-201ENST00000373264 NPNTQ6UXI9 565 aa25.04■■□□□ 1.6
CDK9-201ENST00000373264 UNC45BQ8IWX7 931 aa25.04■■□□□ 1.6
CDK9-201ENST00000373264 C12orf29Q8N999 325 aa25.04■■□□□ 1.6
CDK9-201ENST00000373264 CKAP2Q8WWK9 683 aa25.04■■□□□ 1.6
CDK9-201ENST00000373264 SPOCK2Q92563 424 aa25.04■■□□□ 1.6
CDK9-201ENST00000373264 THOC1Q96FV9 657 aaKnown RBP25.04■■□□□ 1.6
CDK9-201ENST00000373264 WDR83Q9BRX9 315 aaKnown RBP25.04■■□□□ 1.6
CDK9-201ENST00000373264 DDX56Q9NY93 547 aaKnown RBP25.04■■□□□ 1.6
CDK9-201ENST00000373264 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP25.04■■□□□ 1.66e-6■■■■□ 21.4
CDK9-201ENST00000373264 DICER1Q9UPY3 1922 aaKnown RBP25.03■■□□□ 1.6
CDK9-201ENST00000373264 CXCL11O14625 94 aa25.03■■□□□ 1.6
CDK9-201ENST00000373264 CILPO75339 1184 aa25.03■■□□□ 1.6
CDK9-201ENST00000373264 MIPP30301 263 aa25.03■■□□□ 1.6
CDK9-201ENST00000373264 WDR4P57081 412 aaKnown RBP25.03■■□□□ 1.6
CDK9-201ENST00000373264 STAT4Q14765 748 aa25.03■■□□□ 1.6
CDK9-201ENST00000373264 FNBP1LQ5T0N5 605 aa25.03■■□□□ 1.6
CDK9-201ENST00000373264 C4orf33Q8N1A6 199 aa25.03■■□□□ 1.6
CDK9-201ENST00000373264 ANKS4BQ8N8V4 417 aa25.03■■□□□ 1.6
CDK9-201ENST00000373264 HEXIM2Q96MH2 286 aaKnown RBP25.03■■□□□ 1.6
CDK9-201ENST00000373264 LHX5Q9H2C1 402 aa25.03■■□□□ 1.6
CDK9-201ENST00000373264 KDM4CQ9H3R0 1056 aa25.03■■□□□ 1.6
CDK9-201ENST00000373264 ERAP1Q9NZ08 941 aa25.03■■□□□ 1.6
CDK9-201ENST00000373264 AGAP1Q9UPQ3 857 aa25.03■■□□□ 1.6
CDK9-201ENST00000373264 DRG1Q9Y295 367 aaKnown RBP25.03■■□□□ 1.6
CDK9-201ENST00000373264 ITGAVP06756 1048 aa25.03■■□□□ 1.6
CDK9-201ENST00000373264 COPS2P61201 443 aa25.03■■□□□ 1.6
CDK9-201ENST00000373264 TTLL4Q14679 1199 aa25.03■■□□□ 1.6
CDK9-201ENST00000373264 LRRN4Q8WUT4 740 aa25.03■■□□□ 1.6
CDK9-201ENST00000373264 AFG1LQ8WV93 481 aa25.03■■□□□ 1.6
CDK9-201ENST00000373264 TGS1Q96RS0 853 aaKnown RBP25.03■■□□□ 1.6
CDK9-201ENST00000373264 STRIP2Q9ULQ0 834 aa25.03■■□□□ 1.6
CDK9-201ENST00000373264 KCNH4Q9UQ05 1017 aa25.03■■□□□ 1.6
CDK9-201ENST00000373264 ECM2O94769 699 aaPredicted RBP25.02■■□□□ 1.6
CDK9-201ENST00000373264 OAS1P00973 400 aaKnown RBP25.02■■□□□ 1.6
CDK9-201ENST00000373264 ATP5DP30049 168 aa25.02■■□□□ 1.6
CDK9-201ENST00000373264 STX2P32856 288 aa25.02■■□□□ 1.6
CDK9-201ENST00000373264 CTCFP49711 727 aaPredicted RBP25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms