RNA–Protein interactions for RNA: ENST00000372857.7

PABPC4-202, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 1 (best) BASIC

Gene PABPC4, Length 3,048 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-202ENST00000372857 VCX3AQ9NNX9 186 aa16.6■□□□□ 0.25
PABPC4-202ENST00000372857 GINM1Q9NU53 330 aa16.6■□□□□ 0.25
PABPC4-202ENST00000372857 PPARGC1AQ9UBK2 798 aaKnown RBP16.6■□□□□ 0.25
PABPC4-202ENST00000372857 CREB3O43889 395 aa16.6■□□□□ 0.25
PABPC4-202ENST00000372857 OPHN1O60890 802 aa16.6■□□□□ 0.25
PABPC4-202ENST00000372857 MT-ND3P03897 115 aa16.6■□□□□ 0.25
PABPC4-202ENST00000372857 CCNFP41002 786 aa16.6■□□□□ 0.25
PABPC4-202ENST00000372857 MTMR2Q13614 643 aa16.6■□□□□ 0.25
PABPC4-202ENST00000372857 PRKD1Q15139 912 aaPredicted RBP16.6■□□□□ 0.25
PABPC4-202ENST00000372857 C1orf146Q5VVC0 180 aa16.6■□□□□ 0.25
PABPC4-202ENST00000372857 ADGRD1Q6QNK2 874 aa16.6■□□□□ 0.25
PABPC4-202ENST00000372857 FBXO36Q8NEA4 188 aa16.6■□□□□ 0.25
PABPC4-202ENST00000372857 MZB1Q8WU39 189 aa16.6■□□□□ 0.25
PABPC4-202ENST00000372857 WDR83Q9BRX9 315 aaKnown RBP16.6■□□□□ 0.25
PABPC4-202ENST00000372857 WDR11Q9BZH6 1224 aa16.6■□□□□ 0.25
PABPC4-202ENST00000372857 A6NJR5 290 aa16.59■□□□□ 0.25
PABPC4-202ENST00000372857 H0YIN7 160 aa16.59■□□□□ 0.25
PABPC4-202ENST00000372857 KITP10721 976 aa16.59■□□□□ 0.25
PABPC4-202ENST00000372857 YY1P25490 414 aa16.59■□□□□ 0.25
PABPC4-202ENST00000372857 CDK7P50613 346 aa16.59■□□□□ 0.25
PABPC4-202ENST00000372857 RPL7AP62424 266 aaKnown RBP16.59■□□□□ 0.25
PABPC4-202ENST00000372857 DYNLT1P63172 113 aa16.59■□□□□ 0.25
PABPC4-202ENST00000372857 BBS9Q3SYG4 887 aa16.59■□□□□ 0.25
PABPC4-202ENST00000372857 TXNRD3NBQ6F5E7 133 aa16.59■□□□□ 0.25
PABPC4-202ENST00000372857 KLHL23Q8NBE8 558 aa16.59■□□□□ 0.25
PABPC4-202ENST00000372857 DCAKDQ8WVC6 231 aa16.59■□□□□ 0.25
PABPC4-202ENST00000372857 SERAC1Q96JX3 654 aa16.59■□□□□ 0.25
PABPC4-202ENST00000372857 SLITRK1Q96PX8 696 aa16.59■□□□□ 0.25
PABPC4-202ENST00000372857 CENPKQ9BS16 269 aa16.59■□□□□ 0.25
PABPC4-202ENST00000372857 SSU72Q9NP77 194 aaKnown RBP16.59■□□□□ 0.25
PABPC4-202ENST00000372857 MARCOQ9UEW3 520 aaPredicted RBP16.59■□□□□ 0.25
PABPC4-202ENST00000372857 GREB1LQ9C091 1923 aaPredicted RBP16.59■□□□□ 0.25
PABPC4-202ENST00000372857 YDJCA8MPS7 323 aa16.59■□□□□ 0.25
PABPC4-202ENST00000372857 CIB2O75838 187 aa16.59■□□□□ 0.25
PABPC4-202ENST00000372857 RAP1GDS1P52306 607 aa16.59■□□□□ 0.25
PABPC4-202ENST00000372857 LIN9Q5TKA1 542 aa16.59■□□□□ 0.25
PABPC4-202ENST00000372857 TMEM179Q6ZVK1 233 aa16.59■□□□□ 0.25
PABPC4-202ENST00000372857 MIER3Q7Z3K6 550 aa16.59■□□□□ 0.25
PABPC4-202ENST00000372857 ULK2Q8IYT8 1036 aa16.59■□□□□ 0.25
PABPC4-202ENST00000372857 MECRQ9BV79 373 aa16.59■□□□□ 0.25
PABPC4-202ENST00000372857 ZNF395Q9H8N7 513 aaPredicted RBP16.59■□□□□ 0.25
PABPC4-202ENST00000372857 IVNS1ABPQ9Y6Y0 642 aa16.59■□□□□ 0.25
PABPC4-202ENST00000372857 RBBP6Q7Z6E9 1792 aaKnown RBP16.59■□□□□ 0.25
PABPC4-202ENST00000372857 ONECUT3O60422 494 aaPredicted RBP16.59■□□□□ 0.25
PABPC4-202ENST00000372857 PHBP35232 272 aa16.59■□□□□ 0.25
PABPC4-202ENST00000372857 ALCAMQ13740 583 aa16.59■□□□□ 0.25
PABPC4-202ENST00000372857 SYCP2LQ5T4T6 812 aa16.59■□□□□ 0.25
PABPC4-202ENST00000372857 SPOPLQ6IQ16 392 aa16.59■□□□□ 0.25
PABPC4-202ENST00000372857 PALM2Q8IXS6 379 aa16.59■□□□□ 0.25
PABPC4-202ENST00000372857 CPXCR1Q8N123 301 aa16.59■□□□□ 0.25
PABPC4-202ENST00000372857 ARHGAP18Q8N392 663 aa16.59■□□□□ 0.25
PABPC4-202ENST00000372857 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.59■□□□□ 0.25
PABPC4-202ENST00000372857 ATP11CQ8NB49 1132 aa16.59■□□□□ 0.25
PABPC4-202ENST00000372857 TMEM39BQ9GZU3 492 aa16.59■□□□□ 0.25
PABPC4-202ENST00000372857 CHCHD3Q9NX63 227 aaKnown RBP16.59■□□□□ 0.25
PABPC4-202ENST00000372857 SLC7A8Q9UHI5 535 aa16.59■□□□□ 0.25
PABPC4-202ENST00000372857 SHOC2Q9UQ13 582 aa16.59■□□□□ 0.25
PABPC4-202ENST00000372857 COQ4Q9Y3A0 265 aa16.59■□□□□ 0.25
PABPC4-202ENST00000372857 CCDC195A0A1B0GUA6 201 aa16.58■□□□□ 0.24
PABPC4-202ENST00000372857 AP2B1P63010 937 aa16.58■□□□□ 0.24
PABPC4-202ENST00000372857 TMPRSS6Q8IU80 811 aa16.58■□□□□ 0.24
PABPC4-202ENST00000372857 TRIM11Q96F44 468 aa16.58■□□□□ 0.24
PABPC4-202ENST00000372857 ZHX2Q9Y6X8 837 aa16.58■□□□□ 0.24
PABPC4-202ENST00000372857 MYH9P35579 1960 aaKnown RBP16.58■□□□□ 0.24
PABPC4-202ENST00000372857 MEI4A8MW99 385 aa16.58■□□□□ 0.24
PABPC4-202ENST00000372857 RARRES1P49788 294 aa16.58■□□□□ 0.24
PABPC4-202ENST00000372857 VCPP55072 806 aaKnown RBP16.58■□□□□ 0.24
PABPC4-202ENST00000372857 GDF10P55107 478 aa16.58■□□□□ 0.24
PABPC4-202ENST00000372857 GTF2BQ00403 316 aa16.58■□□□□ 0.24
PABPC4-202ENST00000372857 STRIP1Q5VSL9 837 aa16.58■□□□□ 0.24
PABPC4-202ENST00000372857 MARK2Q7KZI7 788 aaKnown RBP16.58■□□□□ 0.24
PABPC4-202ENST00000372857 ACSS3Q9H6R3 686 aa16.58■□□□□ 0.24
PABPC4-202ENST00000372857 C1orf112Q9NSG2 853 aa16.58■□□□□ 0.24
PABPC4-202ENST00000372857 PCDHB2Q9Y5E7 798 aa16.58■□□□□ 0.24
PABPC4-202ENST00000372857 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.57■□□□□ 0.24
PABPC4-202ENST00000372857 TCRBV7S3A2A0A539 114 aa16.57■□□□□ 0.24
PABPC4-202ENST00000372857 DCAF8L1A6NGE4 600 aa16.57■□□□□ 0.24
PABPC4-202ENST00000372857 PMM2O15305 246 aa16.57■□□□□ 0.24
PABPC4-202ENST00000372857 POLR2MP0CAP2 368 aa16.57■□□□□ 0.24
PABPC4-202ENST00000372857 FAM102BQ5T8I3 360 aa16.57■□□□□ 0.24
PABPC4-202ENST00000372857 C6orf163Q5TEZ5 329 aa16.57■□□□□ 0.24
PABPC4-202ENST00000372857 DTNBP1Q96EV8 351 aa16.57■□□□□ 0.24
PABPC4-202ENST00000372857 ETNK2Q9NVF9 386 aa16.57■□□□□ 0.24
PABPC4-202ENST00000372857 CHMP2BQ9UQN3 213 aa16.57■□□□□ 0.24
PABPC4-202ENST00000372857 UBR3Q6ZT12 1888 aa16.57■□□□□ 0.24
PABPC4-202ENST00000372857 MAGEC1O60732 1142 aa16.57■□□□□ 0.24
PABPC4-202ENST00000372857 HARSP12081 509 aaKnown RBP16.57■□□□□ 0.24
PABPC4-202ENST00000372857 ALDH18A1P54886 795 aaKnown RBP16.57■□□□□ 0.24
PABPC4-202ENST00000372857 OASLQ15646 514 aaKnown RBP16.57■□□□□ 0.24
PABPC4-202ENST00000372857 ISLR2Q6UXK2 745 aa16.57■□□□□ 0.24
PABPC4-202ENST00000372857 NET1Q7Z628 596 aaPredicted RBP16.57■□□□□ 0.24
PABPC4-202ENST00000372857 MYLK4Q86YV6 388 aaPredicted RBP16.57■□□□□ 0.24
PABPC4-202ENST00000372857 ST13P4Q8IZP2 240 aaPredicted RBP16.57■□□□□ 0.24
PABPC4-202ENST00000372857 SMC1BQ8NDV3 1235 aa16.57■□□□□ 0.24
PABPC4-202ENST00000372857 PYDC1Q8WXC3 89 aa16.57■□□□□ 0.24
PABPC4-202ENST00000372857 MTBPQ96DY7 904 aa16.57■□□□□ 0.24
PABPC4-202ENST00000372857 ZWILCHQ9H900 591 aa16.57■□□□□ 0.24
PABPC4-202ENST00000372857 PPCSQ9HAB8 311 aa16.57■□□□□ 0.24
PABPC4-202ENST00000372857 PREBQ9HCU5 417 aa16.57■□□□□ 0.24
PABPC4-202ENST00000372857 ZNF277Q9NRM2 450 aaPredicted RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms