RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 HOXD10P28358 340 aa26.36■■□□□ 1.81
CTSA-203ENST00000372459 GGCXP38435 758 aa26.36■■□□□ 1.81
CTSA-203ENST00000372459 SV2CQ496J9 727 aa26.36■■□□□ 1.81
CTSA-203ENST00000372459 CCSAPQ6IQ19 270 aaPredicted RBP26.36■■□□□ 1.81
CTSA-203ENST00000372459 HACE1Q8IYU2 909 aa26.36■■□□□ 1.81
CTSA-203ENST00000372459 PCSK9Q8NBP7 692 aaKnown RBP26.36■■□□□ 1.81
CTSA-203ENST00000372459 JOSD2Q8TAC2 188 aa26.36■■□□□ 1.81
CTSA-203ENST00000372459 OSBPL8Q9BZF1 889 aa26.36■■□□□ 1.81
CTSA-203ENST00000372459 NEUROG2Q9H2A3 272 aa26.36■■□□□ 1.81
CTSA-203ENST00000372459 A8MXQ7 604 aa26.35■■□□□ 1.81
CTSA-203ENST00000372459 AGPSO00116 658 aa26.35■■□□□ 1.81
CTSA-203ENST00000372459 SYF2O95926 243 aaKnown RBP26.35■■□□□ 1.81
CTSA-203ENST00000372459 HSPA9P38646 679 aaKnown RBP26.35■■□□□ 1.81
CTSA-203ENST00000372459 SOX4Q06945 474 aaPredicted RBP26.35■■□□□ 1.81
CTSA-203ENST00000372459 MGAT3Q09327 533 aa26.35■■□□□ 1.81
CTSA-203ENST00000372459 ZFYVE27Q5T4F4 411 aa26.35■■□□□ 1.81
CTSA-203ENST00000372459 PPP1R26Q5T8A7 1209 aaPredicted RBP26.35■■□□□ 1.81
CTSA-203ENST00000372459 LRRC45Q96CN5 670 aa26.35■■□□□ 1.81
CTSA-203ENST00000372459 HOMER3Q9NSC5 361 aa26.35■■□□□ 1.81
CTSA-203ENST00000372459 GYS2P54840 703 aa26.35■■□□□ 1.81
CTSA-203ENST00000372459 KLF1Q13351 362 aaPredicted RBP26.35■■□□□ 1.81
CTSA-203ENST00000372459 C1orf54Q8WWF1 131 aa26.35■■□□□ 1.81
CTSA-203ENST00000372459 RUFY1Q96T51 708 aa26.35■■□□□ 1.81
CTSA-203ENST00000372459 DNAI2Q9GZS0 605 aa26.35■■□□□ 1.81
CTSA-203ENST00000372459 GOLGA2P5Q9HBQ8 144 aa26.35■■□□□ 1.81
CTSA-203ENST00000372459 FAM105AQ9NUU6 356 aa26.35■■□□□ 1.81
CTSA-203ENST00000372459 DDX56Q9NY93 547 aaKnown RBP26.35■■□□□ 1.81
CTSA-203ENST00000372459 SRRDQ9UH36 339 aa26.35■■□□□ 1.81
CTSA-203ENST00000372459 FAN1Q9Y2M0 1017 aa26.35■■□□□ 1.81
CTSA-203ENST00000372459 GPR182O15218 404 aa26.34■■□□□ 1.81
CTSA-203ENST00000372459 ECEL1O95672 775 aa26.34■■□□□ 1.81
CTSA-203ENST00000372459 TCF4P15884 667 aa26.34■■□□□ 1.81
CTSA-203ENST00000372459 GBP1P32455 592 aa26.34■■□□□ 1.81
CTSA-203ENST00000372459 HNRNPH2P55795 449 aaKnown RBP26.34■■□□□ 1.81
CTSA-203ENST00000372459 PTGISQ16647 500 aa26.34■■□□□ 1.81
CTSA-203ENST00000372459 KCTD19Q17RG1 926 aaPredicted RBP26.34■■□□□ 1.81
CTSA-203ENST00000372459 ODF2Q5BJF6 829 aa26.34■■□□□ 1.81
CTSA-203ENST00000372459 SLCO2A1Q92959 643 aa26.34■■□□□ 1.81
CTSA-203ENST00000372459 HERPUD2Q9BSE4 406 aa26.34■■□□□ 1.81
CTSA-203ENST00000372459 HEMGNQ9BXL5 484 aa26.34■■□□□ 1.81
CTSA-203ENST00000372459 HESX1Q9UBX0 185 aa26.34■■□□□ 1.81
CTSA-203ENST00000372459 NME7Q9Y5B8 376 aa26.34■■□□□ 1.81
CTSA-203ENST00000372459 SPTLC1O15269 473 aa26.33■■□□□ 1.81
CTSA-203ENST00000372459 KRT1P04264 644 aa26.33■■□□□ 1.81
CTSA-203ENST00000372459 PFKMP08237 780 aa26.33■■□□□ 1.81
CTSA-203ENST00000372459 SETSIPP0DME0 302 aa26.33■■□□□ 1.81
CTSA-203ENST00000372459 LRPAP1P30533 357 aa26.33■■□□□ 1.81
CTSA-203ENST00000372459 APPL2Q8NEU8 664 aa26.33■■□□□ 1.81
CTSA-203ENST00000372459 RNF25Q96BH1 459 aaPredicted RBP26.33■■□□□ 1.81
CTSA-203ENST00000372459 CFHR5Q9BXR6 569 aa26.33■■□□□ 1.81
CTSA-203ENST00000372459 PTGESO14684 152 aa26.33■■□□□ 1.8
CTSA-203ENST00000372459 THPOP40225 353 aa26.33■■□□□ 1.8
CTSA-203ENST00000372459 KCNJ1P48048 391 aa26.33■■□□□ 1.8
CTSA-203ENST00000372459 LMAN1P49257 510 aa26.33■■□□□ 1.8
CTSA-203ENST00000372459 COPS2P61201 443 aa26.33■■□□□ 1.8
CTSA-203ENST00000372459 ATP13A4Q4VNC1 1196 aa26.33■■□□□ 1.8
CTSA-203ENST00000372459 PKDCCQ504Y2 493 aa26.33■■□□□ 1.8
CTSA-203ENST00000372459 CFAP58Q5T655 872 aa26.33■■□□□ 1.8
CTSA-203ENST00000372459 FAM102AQ5T9C2 384 aaPredicted RBP26.33■■□□□ 1.8
CTSA-203ENST00000372459 POLNQ7Z5Q5 900 aa26.33■■□□□ 1.8
CTSA-203ENST00000372459 KBTBD7Q8WVZ9 684 aa26.33■■□□□ 1.8
CTSA-203ENST00000372459 SLITRK1Q96PX8 696 aa26.33■■□□□ 1.8
CTSA-203ENST00000372459 PPP1R10Q96QC0 940 aaKnown RBP26.33■■□□□ 1.8
CTSA-203ENST00000372459 DCLK3Q9C098 648 aa26.33■■□□□ 1.8
CTSA-203ENST00000372459 SNX25Q9H3E2 840 aa26.33■■□□□ 1.8
CTSA-203ENST00000372459 FAM49BQ9NUQ9 324 aa26.33■■□□□ 1.8
CTSA-203ENST00000372459 PTPN22Q9Y2R2 807 aa26.33■■□□□ 1.8
CTSA-203ENST00000372459 GNL1P36915 607 aaPredicted RBP26.32■■□□□ 1.8
CTSA-203ENST00000372459 HADHQ16836 314 aaKnown RBP26.32■■□□□ 1.8
CTSA-203ENST00000372459 ARHGAP17Q68EM7 881 aa26.32■■□□□ 1.8
CTSA-203ENST00000372459 GRK7Q8WTQ7 553 aa26.32■■□□□ 1.8
CTSA-203ENST00000372459 CHST7Q9NS84 486 aa26.32■■□□□ 1.8
CTSA-203ENST00000372459 SLC38A7Q9NVC3 462 aa26.32■■□□□ 1.8
CTSA-203ENST00000372459 KLHL11Q9NVR0 708 aa26.32■■□□□ 1.8
CTSA-203ENST00000372459 SNX24Q9Y343 169 aa26.32■■□□□ 1.8
CTSA-203ENST00000372459 GRIN2DO15399 1336 aa26.31■■□□□ 1.8
CTSA-203ENST00000372459 E5RJQ4 531 aa26.31■■□□□ 1.8
CTSA-203ENST00000372459 ACAP1Q15027 740 aa26.31■■□□□ 1.8
CTSA-203ENST00000372459 RNF180Q86T96 592 aa26.31■■□□□ 1.8
CTSA-203ENST00000372459 TTC30AQ86WT1 665 aa26.31■■□□□ 1.8
CTSA-203ENST00000372459 EMC1Q8N766 993 aa26.31■■□□□ 1.8
CTSA-203ENST00000372459 ZFP42Q96MM3 310 aa26.31■■□□□ 1.8
CTSA-203ENST00000372459 FMO2Q99518 471 aa26.31■■□□□ 1.8
CTSA-203ENST00000372459 DDX20Q9UHI6 824 aaKnown RBP26.31■■□□□ 1.8
CTSA-203ENST00000372459 FEZ2Q9UHY8 353 aaPredicted RBP26.31■■□□□ 1.8
CTSA-203ENST00000372459 OPA1O60313 960 aa26.31■■□□□ 1.8
CTSA-203ENST00000372459 HUS1O60921 280 aa26.31■■□□□ 1.8
CTSA-203ENST00000372459 SNX16P57768 344 aa26.31■■□□□ 1.8
CTSA-203ENST00000372459 LILRA4P59901 499 aa26.31■■□□□ 1.8
CTSA-203ENST00000372459 SNX1Q13596 522 aa26.31■■□□□ 1.8
CTSA-203ENST00000372459 MAP3K21Q5TCX8 1036 aa26.31■■□□□ 1.8
CTSA-203ENST00000372459 OR6B2Q6IFH4 312 aa26.31■■□□□ 1.8
CTSA-203ENST00000372459 LIMS2Q7Z4I7 341 aa26.31■■□□□ 1.8
CTSA-203ENST00000372459 IQCKQ8N0W5 287 aa26.31■■□□□ 1.8
CTSA-203ENST00000372459 CRYBG2Q8N1P7 616 aa26.31■■□□□ 1.8
CTSA-203ENST00000372459 GOLGA6L1Q8N7Z2 621 aa26.31■■□□□ 1.8
CTSA-203ENST00000372459 RIN2Q8WYP3 895 aaPredicted RBP26.31■■□□□ 1.8
CTSA-203ENST00000372459 ZIM3Q96PE6 472 aa26.31■■□□□ 1.8
CTSA-203ENST00000372459 DPEP3Q9H4B8 488 aa26.31■■□□□ 1.8
CTSA-203ENST00000372459 PI4K2BG5E9Z4 385 aa26.3■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms