RNA–Protein interactions for RNA: ENST00000372064.8

VEGFA-204, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,909 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-204ENST00000372064 VTA1Q9NP79 307 aa21.66■■□□□ 1.06
VEGFA-204ENST00000372064 TMEM120BA0PK00 339 aa21.66■■□□□ 1.06
VEGFA-204ENST00000372064 CDH16O75309 829 aa21.66■■□□□ 1.06
VEGFA-204ENST00000372064 KRT7P08729 469 aa21.66■■□□□ 1.06
VEGFA-204ENST00000372064 GABRB2P47870 512 aa21.66■■□□□ 1.06
VEGFA-204ENST00000372064 PTPN11Q06124 597 aaPredicted RBP21.66■■□□□ 1.06
VEGFA-204ENST00000372064 ZNF268Q14587 947 aaPredicted RBP21.66■■□□□ 1.06
VEGFA-204ENST00000372064 MORF4L2Q15014 288 aa21.66■■□□□ 1.06
VEGFA-204ENST00000372064 KIAA0319LQ8IZA0 1049 aa21.66■■□□□ 1.06
VEGFA-204ENST00000372064 P3H4Q92791 437 aa21.66■■□□□ 1.06
VEGFA-204ENST00000372064 C9orf72Q96LT7 481 aa21.66■■□□□ 1.06
VEGFA-204ENST00000372064 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.66■■□□□ 1.06
VEGFA-204ENST00000372064 CAPN7Q9Y6W3 813 aa21.66■■□□□ 1.06
VEGFA-204ENST00000372064 ERBB2P04626 1255 aa21.66■■□□□ 1.06
VEGFA-204ENST00000372064 CREB1P16220 341 aa21.66■■□□□ 1.06
VEGFA-204ENST00000372064 IL1R2P27930 398 aa21.66■■□□□ 1.06
VEGFA-204ENST00000372064 CCNA1P78396 465 aa21.66■■□□□ 1.06
VEGFA-204ENST00000372064 MKRN3Q13064 507 aaKnown RBP21.66■■□□□ 1.06
VEGFA-204ENST00000372064 SMTNL2Q2TAL5 461 aa21.66■■□□□ 1.06
VEGFA-204ENST00000372064 EMC1Q8N766 993 aa21.66■■□□□ 1.06
VEGFA-204ENST00000372064 TMEM176AQ96HP8 235 aa21.66■■□□□ 1.06
VEGFA-204ENST00000372064 FRMD8P1Q9BZ68 369 aaPredicted RBP21.66■■□□□ 1.06
VEGFA-204ENST00000372064 PCDH9Q9HC56 1237 aa21.66■■□□□ 1.06
VEGFA-204ENST00000372064 COL1A2P08123 1366 aa21.65■■□□□ 1.06
VEGFA-204ENST00000372064 PDHXO00330 501 aa21.65■■□□□ 1.06
VEGFA-204ENST00000372064 ETS1P14921 441 aa21.65■■□□□ 1.06
VEGFA-204ENST00000372064 GPS1Q13098 491 aa21.65■■□□□ 1.06
VEGFA-204ENST00000372064 KYAT1Q16773 422 aa21.65■■□□□ 1.06
VEGFA-204ENST00000372064 CYP4X1Q8N118 509 aa21.65■■□□□ 1.06
VEGFA-204ENST00000372064 CNPY4Q8N129 248 aa21.65■■□□□ 1.06
VEGFA-204ENST00000372064 CCDC197Q8NCU1 140 aa21.65■■□□□ 1.06
VEGFA-204ENST00000372064 EMID1Q96A84 441 aaPredicted RBP21.65■■□□□ 1.06
VEGFA-204ENST00000372064 CCDC77Q9BR77 488 aa21.65■■□□□ 1.06
VEGFA-204ENST00000372064 SYT17Q9BSW7 474 aa21.65■■□□□ 1.06
VEGFA-204ENST00000372064 ZNF408Q9H9D4 720 aa21.65■■□□□ 1.06
VEGFA-204ENST00000372064 ACTR5Q9H9F9 607 aaPredicted RBP21.65■■□□□ 1.06
VEGFA-204ENST00000372064 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.65■■□□□ 1.06
VEGFA-204ENST00000372064 RBM47A0AV96 593 aaKnown RBP21.65■■□□□ 1.06
VEGFA-204ENST00000372064 NDC80O14777 642 aa21.65■■□□□ 1.06
VEGFA-204ENST00000372064 PSMC4P43686 418 aa21.65■■□□□ 1.06
VEGFA-204ENST00000372064 LACTB2Q53H82 288 aaPredicted RBP21.65■■□□□ 1.06
VEGFA-204ENST00000372064 RNASEH2BQ5TBB1 312 aaKnown RBP21.65■■□□□ 1.06
VEGFA-204ENST00000372064 MTHFD1LQ6UB35 978 aa21.65■■□□□ 1.06
VEGFA-204ENST00000372064 ILDR2Q71H61 639 aa21.65■■□□□ 1.06
VEGFA-204ENST00000372064 RIBC1Q8N443 379 aaPredicted RBP21.65■■□□□ 1.06
VEGFA-204ENST00000372064 NLRP7Q8WX94 980 aa21.65■■□□□ 1.06
VEGFA-204ENST00000372064 UPF1Q92900 1129 aaKnown RBP eCLIP21.65■■□□□ 1.061e-10■■□□□ 12.8
VEGFA-204ENST00000372064 KATNBL1Q9H079 304 aa21.65■■□□□ 1.06
VEGFA-204ENST00000372064 ZWILCHQ9H900 591 aa21.65■■□□□ 1.06
VEGFA-204ENST00000372064 METTL5Q9NRN9 209 aaKnown RBP21.65■■□□□ 1.06
VEGFA-204ENST00000372064 NAALADL1Q9UQQ1 740 aa21.65■■□□□ 1.06
VEGFA-204ENST00000372064 ACTL7BQ9Y614 415 aa21.65■■□□□ 1.06
VEGFA-204ENST00000372064 MICAL2O94851 1124 aa21.64■■□□□ 1.06
VEGFA-204ENST00000372064 ITIH4Q14624 930 aa21.64■■□□□ 1.06
VEGFA-204ENST00000372064 HADHQ16836 314 aaKnown RBP21.64■■□□□ 1.06
VEGFA-204ENST00000372064 KCNT1Q5JUK3 1230 aa21.64■■□□□ 1.06
VEGFA-204ENST00000372064 CCT6BQ92526 530 aa21.64■■□□□ 1.06
VEGFA-204ENST00000372064 MCRS1Q96EZ8 462 aa21.64■■□□□ 1.06
VEGFA-204ENST00000372064 TTC25Q96NG3 672 aa21.64■■□□□ 1.06
VEGFA-204ENST00000372064 SYNCQ9H7C4 482 aa21.64■■□□□ 1.06
VEGFA-204ENST00000372064 AGAP1Q9UPQ3 857 aa21.64■■□□□ 1.06
VEGFA-204ENST00000372064 PECAM1P16284 738 aaPredicted RBP21.64■■□□□ 1.05
VEGFA-204ENST00000372064 GTF3C2Q8WUA4 911 aaPredicted RBP21.64■■□□□ 1.05
VEGFA-204ENST00000372064 CFAP57Q96MR6 1250 aa21.64■■□□□ 1.05
VEGFA-204ENST00000372064 TMEM51Q9NW97 253 aa21.64■■□□□ 1.05
VEGFA-204ENST00000372064 SHOC2Q9UQ13 582 aa21.64■■□□□ 1.05
VEGFA-204ENST00000372064 H3BRB1 525 aa21.63■■□□□ 1.05
VEGFA-204ENST00000372064 SNAI1O95863 264 aaPredicted RBP21.63■■□□□ 1.05
VEGFA-204ENST00000372064 KDELR1P24390 212 aa21.63■■□□□ 1.05
VEGFA-204ENST00000372064 TMEM132DQ14C87 1099 aa21.63■■□□□ 1.05
VEGFA-204ENST00000372064 ANKRD20A8PQ5CZ79 823 aa21.63■■□□□ 1.05
VEGFA-204ENST00000372064 BBS12Q6ZW61 710 aa21.63■■□□□ 1.05
VEGFA-204ENST00000372064 HPDLQ96IR7 371 aa21.63■■□□□ 1.05
VEGFA-204ENST00000372064 TMEM121Q9BTD3 319 aa21.63■■□□□ 1.05
VEGFA-204ENST00000372064 KDM4CQ9H3R0 1056 aa21.63■■□□□ 1.05
VEGFA-204ENST00000372064 TUT1Q9H6E5 874 aaKnown RBP21.63■■□□□ 1.05
VEGFA-204ENST00000372064 SAYSD1Q9NPB0 183 aa21.63■■□□□ 1.05
VEGFA-204ENST00000372064 PLXNA1Q9UIW2 1896 aa21.63■■□□□ 1.05
VEGFA-204ENST00000372064 BTBD19C9JJ37 291 aa21.63■■□□□ 1.05
VEGFA-204ENST00000372064 HMGCRP04035 888 aa21.63■■□□□ 1.05
VEGFA-204ENST00000372064 IFNAR2P48551 515 aa21.63■■□□□ 1.05
VEGFA-204ENST00000372064 FAM124BQ9H5Z6 455 aaPredicted RBP21.63■■□□□ 1.05
VEGFA-204ENST00000372064 TSPAN1O60635 241 aa21.62■■□□□ 1.05
VEGFA-204ENST00000372064 STAU1O95793 577 aaKnown RBP21.62■■□□□ 1.05
VEGFA-204ENST00000372064 P4HA1P13674 534 aa21.62■■□□□ 1.05
VEGFA-204ENST00000372064 GPD2P43304 727 aa21.62■■□□□ 1.05
VEGFA-204ENST00000372064 PDE4CQ08493 712 aa21.62■■□□□ 1.05
VEGFA-204ENST00000372064 ACAP1Q15027 740 aa21.62■■□□□ 1.05
VEGFA-204ENST00000372064 DPH6Q7L8W6 267 aa21.62■■□□□ 1.05
VEGFA-204ENST00000372064 CCDC13Q8IYE1 715 aa21.62■■□□□ 1.05
VEGFA-204ENST00000372064 TTC13Q8NBP0 860 aa21.62■■□□□ 1.05
VEGFA-204ENST00000372064 FOXO6A8MYZ6 492 aa21.62■■□□□ 1.05
VEGFA-204ENST00000372064 M0QYV0 167 aa21.62■■□□□ 1.05
VEGFA-204ENST00000372064 VDRP11473 427 aa21.62■■□□□ 1.05
VEGFA-204ENST00000372064 DYNLT1P63172 113 aa21.62■■□□□ 1.05
VEGFA-204ENST00000372064 INCA1Q0VD86 236 aa21.62■■□□□ 1.05
VEGFA-204ENST00000372064 SPRED3Q2MJR0 410 aa21.62■■□□□ 1.05
VEGFA-204ENST00000372064 ANKS4BQ8N8V4 417 aa21.62■■□□□ 1.05
VEGFA-204ENST00000372064 NSRP1Q9H0G5 558 aaKnown RBP21.62■■□□□ 1.05
VEGFA-204ENST00000372064 SAE1Q9UBE0 346 aaPredicted RBP21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms