RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 GJA5P36382 358 aa30.45■■■□□ 2.46
SSBP3-204ENST00000371320 GSCP56915 257 aaPredicted RBP30.45■■■□□ 2.46
SSBP3-204ENST00000371320 SLC10A6Q3KNW5 377 aa30.45■■■□□ 2.46
SSBP3-204ENST00000371320 KCNT1Q5JUK3 1230 aa30.45■■■□□ 2.46
SSBP3-204ENST00000371320 USP50Q70EL3 339 aaPredicted RBP30.45■■■□□ 2.46
SSBP3-204ENST00000371320 KIAA0319LQ8IZA0 1049 aa30.45■■■□□ 2.46
SSBP3-204ENST00000371320 CYP4X1Q8N118 509 aa30.45■■■□□ 2.46
SSBP3-204ENST00000371320 EMC1Q8N766 993 aa30.45■■■□□ 2.46
SSBP3-204ENST00000371320 CFAP57Q96MR6 1250 aa30.45■■■□□ 2.46
SSBP3-204ENST00000371320 OSBPL7Q9BZF2 842 aa30.45■■■□□ 2.46
SSBP3-204ENST00000371320 VRTNQ9H8Y1 702 aa30.45■■■□□ 2.46
SSBP3-204ENST00000371320 FOXO6A8MYZ6 492 aa30.44■■■□□ 2.46
SSBP3-204ENST00000371320 CETPP11597 493 aa30.44■■■□□ 2.46
SSBP3-204ENST00000371320 PECAM1P16284 738 aaPredicted RBP30.44■■■□□ 2.46
SSBP3-204ENST00000371320 ARF4P18085 180 aaPredicted RBP30.44■■■□□ 2.46
SSBP3-204ENST00000371320 DYNLT1P63172 113 aa30.44■■■□□ 2.46
SSBP3-204ENST00000371320 ACTN3Q08043 901 aaPredicted RBP30.44■■■□□ 2.46
SSBP3-204ENST00000371320 PDE4CQ08493 712 aa30.44■■■□□ 2.46
SSBP3-204ENST00000371320 MORF4L2Q15014 288 aa30.44■■■□□ 2.46
SSBP3-204ENST00000371320 LRRC14Q15048 493 aa30.44■■■□□ 2.46
SSBP3-204ENST00000371320 PIGWQ7Z7B1 504 aa30.44■■■□□ 2.46
SSBP3-204ENST00000371320 PPTC7Q8NI37 304 aa30.44■■■□□ 2.46
SSBP3-204ENST00000371320 SLC35B2Q8TB61 432 aa30.44■■■□□ 2.46
SSBP3-204ENST00000371320 AFG1LQ8WV93 481 aa30.44■■■□□ 2.46
SSBP3-204ENST00000371320 KAT2BQ92831 832 aa30.44■■■□□ 2.46
SSBP3-204ENST00000371320 HPDLQ96IR7 371 aa30.44■■■□□ 2.46
SSBP3-204ENST00000371320 PNMA3Q9UL41 463 aa30.44■■■□□ 2.46
SSBP3-204ENST00000371320 MGAMO43451 1857 aa30.44■■■□□ 2.46
SSBP3-204ENST00000371320 IFNB1P01574 187 aa30.43■■■□□ 2.46
SSBP3-204ENST00000371320 TMEM132DQ14C87 1099 aa30.43■■■□□ 2.46
SSBP3-204ENST00000371320 KYAT1Q16773 422 aa30.43■■■□□ 2.46
SSBP3-204ENST00000371320 ZNF792Q3KQV3 632 aa30.43■■■□□ 2.46
SSBP3-204ENST00000371320 ANKS4BQ8N8V4 417 aa30.43■■■□□ 2.46
SSBP3-204ENST00000371320 GPRC5AQ8NFJ5 357 aa30.43■■■□□ 2.46
SSBP3-204ENST00000371320 ZC3H15Q8WU90 426 aaKnown RBP30.43■■■□□ 2.46
SSBP3-204ENST00000371320 NSRP1Q9H0G5 558 aaKnown RBP30.43■■■□□ 2.46
SSBP3-204ENST00000371320 PCDH9Q9HC56 1237 aa30.43■■■□□ 2.46
SSBP3-204ENST00000371320 SAMD15Q9P1V8 674 aa30.43■■■□□ 2.46
SSBP3-204ENST00000371320 WDR3Q9UNX4 943 aaKnown RBP eCLIP30.43■■■□□ 2.46
SSBP3-204ENST00000371320 M0QYV0 167 aa30.43■■■□□ 2.46
SSBP3-204ENST00000371320 ZNF286BP0CG31 522 aa30.43■■■□□ 2.46
SSBP3-204ENST00000371320 BRAFP15056 766 aa30.43■■■□□ 2.46
SSBP3-204ENST00000371320 HEXIM2Q96MH2 286 aaKnown RBP30.43■■■□□ 2.46
SSBP3-204ENST00000371320 TTC25Q96NG3 672 aa30.43■■■□□ 2.46
SSBP3-204ENST00000371320 VTA1Q9NP79 307 aa30.43■■■□□ 2.46
SSBP3-204ENST00000371320 AGAP1Q9UPQ3 857 aa30.43■■■□□ 2.46
SSBP3-204ENST00000371320 NDC80O14777 642 aa30.42■■■□□ 2.46
SSBP3-204ENST00000371320 ITGBL1O95965 494 aaPredicted RBP30.42■■■□□ 2.46
SSBP3-204ENST00000371320 KDELR1P24390 212 aa30.42■■■□□ 2.46
SSBP3-204ENST00000371320 CCNA1P78396 465 aa30.42■■■□□ 2.46
SSBP3-204ENST00000371320 MAMDC4Q6UXC1 1216 aa30.42■■■□□ 2.46
SSBP3-204ENST00000371320 ANKRD42Q8N9B4 389 aa30.42■■■□□ 2.46
SSBP3-204ENST00000371320 NLRP7Q8WX94 980 aa30.42■■■□□ 2.46
SSBP3-204ENST00000371320 ACTR5Q9H9F9 607 aaPredicted RBP30.42■■■□□ 2.46
SSBP3-204ENST00000371320 SAE1Q9UBE0 346 aaPredicted RBP30.42■■■□□ 2.46
SSBP3-204ENST00000371320 CST8O60676 142 aa30.42■■■□□ 2.46
SSBP3-204ENST00000371320 VDRP11473 427 aa30.42■■■□□ 2.46
SSBP3-204ENST00000371320 ADORA2AP29274 412 aa30.42■■■□□ 2.46
SSBP3-204ENST00000371320 RNASEH2BQ5TBB1 312 aaKnown RBP30.42■■■□□ 2.46
SSBP3-204ENST00000371320 C9orf131Q5VYM1 1079 aa30.42■■■□□ 2.46
SSBP3-204ENST00000371320 ILDR2Q71H61 639 aa30.42■■■□□ 2.46
SSBP3-204ENST00000371320 TAX1BP1Q86VP1 789 aa30.42■■■□□ 2.46
SSBP3-204ENST00000371320 TTC13Q8NBP0 860 aa30.42■■■□□ 2.46
SSBP3-204ENST00000371320 P3H4Q92791 437 aa30.42■■■□□ 2.46
SSBP3-204ENST00000371320 FRMD8P1Q9BZ68 369 aaPredicted RBP30.42■■■□□ 2.46
SSBP3-204ENST00000371320 HMGCRP04035 888 aa30.41■■■□□ 2.46
SSBP3-204ENST00000371320 GABRB2P47870 512 aa30.41■■■□□ 2.46
SSBP3-204ENST00000371320 OTUD4Q01804 1114 aaKnown RBP30.41■■■□□ 2.46
SSBP3-204ENST00000371320 MYO1EQ12965 1108 aa30.41■■■□□ 2.46
SSBP3-204ENST00000371320 BBS12Q6ZW61 710 aa30.41■■■□□ 2.46
SSBP3-204ENST00000371320 ACTL9Q8TC94 416 aa30.41■■■□□ 2.46
SSBP3-204ENST00000371320 GTF3C2Q8WUA4 911 aaPredicted RBP30.41■■■□□ 2.46
SSBP3-204ENST00000371320 ELAC2Q9BQ52 826 aaKnown RBP30.41■■■□□ 2.46
SSBP3-204ENST00000371320 PCSK1NQ9UHG2 260 aa30.41■■■□□ 2.46
SSBP3-204ENST00000371320 DYNC1LI1Q9Y6G9 523 aaKnown RBP30.41■■■□□ 2.46
SSBP3-204ENST00000371320 COL1A2P08123 1366 aa30.41■■■□□ 2.46
SSBP3-204ENST00000371320 EPHX2P34913 555 aa30.4■■■□□ 2.46
SSBP3-204ENST00000371320 FBXW10Q5XX13 1052 aa30.4■■■□□ 2.46
SSBP3-204ENST00000371320 MTHFD1LQ6UB35 978 aa30.4■■■□□ 2.46
SSBP3-204ENST00000371320 DPH6Q7L8W6 267 aa30.4■■■□□ 2.46
SSBP3-204ENST00000371320 CCDC13Q8IYE1 715 aa30.4■■■□□ 2.46
SSBP3-204ENST00000371320 MCRS1Q96EZ8 462 aa30.4■■■□□ 2.46
SSBP3-204ENST00000371320 SHOC2Q9UQ13 582 aa30.4■■■□□ 2.46
SSBP3-204ENST00000371320 GPD2P43304 727 aa30.4■■■□□ 2.46
SSBP3-204ENST00000371320 PSMC4P43686 418 aa30.4■■■□□ 2.46
SSBP3-204ENST00000371320 ITIH4Q14624 930 aa30.4■■■□□ 2.46
SSBP3-204ENST00000371320 TAZQ16635 292 aa30.4■■■□□ 2.46
SSBP3-204ENST00000371320 ANKRD20A8PQ5CZ79 823 aa30.4■■■□□ 2.46
SSBP3-204ENST00000371320 SRRM1Q8IYB3 904 aaKnown RBP30.4■■■□□ 2.46
SSBP3-204ENST00000371320 RIBC1Q8N443 379 aaPredicted RBP30.4■■■□□ 2.46
SSBP3-204ENST00000371320 KCTD6Q8NC69 237 aa30.4■■■□□ 2.46
SSBP3-204ENST00000371320 SLC10A4Q96EP9 437 aa30.4■■■□□ 2.46
SSBP3-204ENST00000371320 ITGA11Q9UKX5 1188 aa30.4■■■□□ 2.46
SSBP3-204ENST00000371320 EXOC1LA0A1B0GW35 172 aa30.39■■■□□ 2.46
SSBP3-204ENST00000371320 RNF8O76064 485 aa30.39■■■□□ 2.46
SSBP3-204ENST00000371320 ADCYAP1R1P41586 468 aa30.39■■■□□ 2.46
SSBP3-204ENST00000371320 CCT6BQ92526 530 aa30.39■■■□□ 2.46
SSBP3-204ENST00000371320 EMID1Q96A84 441 aaPredicted RBP30.39■■■□□ 2.46
SSBP3-204ENST00000371320 ACAP3Q96P50 834 aa30.39■■■□□ 2.46
SSBP3-204ENST00000371320 C16orf70Q9BSU1 422 aa30.39■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms