RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 SETSIPP0DME0 302 aa12.35□□□□□ -0.43
DEPDC1-201ENST00000370966 MYL2P10916 166 aa12.35□□□□□ -0.43
DEPDC1-201ENST00000370966 DSG3P32926 999 aa12.35□□□□□ -0.43
DEPDC1-201ENST00000370966 CPT1AP50416 773 aa12.35□□□□□ -0.43
DEPDC1-201ENST00000370966 PTPN11Q06124 597 aaPredicted RBP12.35□□□□□ -0.43
DEPDC1-201ENST00000370966 SPOCD1Q6ZMY3 1216 aa12.35□□□□□ -0.43
DEPDC1-201ENST00000370966 EP400NLQ6ZTU2 488 aa12.35□□□□□ -0.43
DEPDC1-201ENST00000370966 DDIASQ8IXT1 998 aa12.35□□□□□ -0.43
DEPDC1-201ENST00000370966 C20orf96Q9NUD7 363 aaPredicted RBP12.35□□□□□ -0.43
DEPDC1-201ENST00000370966 CYP3A7-CYP3A51PA0A087WV96 503 aa12.35□□□□□ -0.43
DEPDC1-201ENST00000370966 EML1O00423 815 aa12.35□□□□□ -0.43
DEPDC1-201ENST00000370966 ANP32DO95626 131 aa12.35□□□□□ -0.43
DEPDC1-201ENST00000370966 IL10P22301 178 aa12.35□□□□□ -0.43
DEPDC1-201ENST00000370966 CYP3A7P24462 503 aa12.35□□□□□ -0.43
DEPDC1-201ENST00000370966 GCLCP48506 637 aaPredicted RBP12.35□□□□□ -0.43
DEPDC1-201ENST00000370966 NT5DC3Q86UY8 548 aa12.35□□□□□ -0.43
DEPDC1-201ENST00000370966 SPATA20Q8TB22 786 aa12.35□□□□□ -0.43
DEPDC1-201ENST00000370966 FAM167BQ9BTA0 163 aa12.35□□□□□ -0.43
DEPDC1-201ENST00000370966 ARHGAP10A1A4S6 786 aa12.34□□□□□ -0.43
DEPDC1-201ENST00000370966 B2RBV5 119 aa12.34□□□□□ -0.43
DEPDC1-201ENST00000370966 TMCC1O94876 653 aa12.34□□□□□ -0.43
DEPDC1-201ENST00000370966 APOA4P06727 396 aa12.34□□□□□ -0.43
DEPDC1-201ENST00000370966 CYP2B6P20813 491 aa12.34□□□□□ -0.43
DEPDC1-201ENST00000370966 MYL6P60660 151 aa12.34□□□□□ -0.43
DEPDC1-201ENST00000370966 C2CD6Q53TS8 623 aa12.34□□□□□ -0.43
DEPDC1-201ENST00000370966 NBPF12Q5TAG4 269 aaPredicted RBP12.34□□□□□ -0.43
DEPDC1-201ENST00000370966 TTC23LQ6PF05 361 aa12.34□□□□□ -0.43
DEPDC1-201ENST00000370966 TAS2R42Q7RTR8 314 aa12.34□□□□□ -0.43
DEPDC1-201ENST00000370966 SNX19Q92543 992 aa12.34□□□□□ -0.43
DEPDC1-201ENST00000370966 PABPC5Q96DU9 382 aaKnown RBP12.34□□□□□ -0.43
DEPDC1-201ENST00000370966 ANLNQ9NQW6 1124 aa12.34□□□□□ -0.43
DEPDC1-201ENST00000370966 SHOC2Q9UQ13 582 aa12.34□□□□□ -0.43
DEPDC1-201ENST00000370966 FARP1Q9Y4F1 1045 aaPredicted RBP12.34□□□□□ -0.43
DEPDC1-201ENST00000370966 ANXA9O76027 345 aa12.34□□□□□ -0.43
DEPDC1-201ENST00000370966 NCAM1P13591 858 aa12.34□□□□□ -0.43
DEPDC1-201ENST00000370966 EPHB2P29323 1055 aa12.34□□□□□ -0.43
DEPDC1-201ENST00000370966 R3HDM1Q15032 1099 aaKnown RBP12.34□□□□□ -0.43
DEPDC1-201ENST00000370966 NBPF20Q3BBV1 942 aa12.34□□□□□ -0.43
DEPDC1-201ENST00000370966 LRRC55Q6ZSA7 311 aa12.34□□□□□ -0.43
DEPDC1-201ENST00000370966 ZNF606Q8WXB4 792 aa12.34□□□□□ -0.43
DEPDC1-201ENST00000370966 NSL1Q96IY1 281 aa12.34□□□□□ -0.43
DEPDC1-201ENST00000370966 MAGEB18Q96M61 343 aa12.34□□□□□ -0.43
DEPDC1-201ENST00000370966 INTS13Q9NVM9 706 aa12.34□□□□□ -0.43
DEPDC1-201ENST00000370966 VWA5AO00534 786 aa12.34□□□□□ -0.43
DEPDC1-201ENST00000370966 STAG3L1P0CL83 205 aa12.34□□□□□ -0.43
DEPDC1-201ENST00000370966 IFNA8P32881 189 aa12.34□□□□□ -0.43
DEPDC1-201ENST00000370966 BCAT1P54687 386 aa12.34□□□□□ -0.43
DEPDC1-201ENST00000370966 COBLL1Q53SF7 1204 aa12.34□□□□□ -0.43
DEPDC1-201ENST00000370966 C1orf186Q6ZWK4 172 aa12.34□□□□□ -0.43
DEPDC1-201ENST00000370966 MAP4K3Q8IVH8 894 aa12.34□□□□□ -0.43
DEPDC1-201ENST00000370966 LRRC43Q8N309 656 aa12.34□□□□□ -0.43
DEPDC1-201ENST00000370966 EFHBQ8N7U6 833 aa12.34□□□□□ -0.43
DEPDC1-201ENST00000370966 USP33Q8TEY7 942 aa12.34□□□□□ -0.43
DEPDC1-201ENST00000370966 PCDH9Q9HC56 1237 aa12.34□□□□□ -0.43
DEPDC1-201ENST00000370966 SLC13A4Q9UKG4 626 aa12.34□□□□□ -0.43
DEPDC1-201ENST00000370966 CACNB2Q08289 660 aaPredicted RBP12.33□□□□□ -0.43
DEPDC1-201ENST00000370966 MTM1Q13496 603 aa12.33□□□□□ -0.43
DEPDC1-201ENST00000370966 GNASQ5JWF2 1037 aa12.33□□□□□ -0.43
DEPDC1-201ENST00000370966 MROH9Q5TGP6 573 aa12.33□□□□□ -0.43
DEPDC1-201ENST00000370966 CAPRIN2Q6IMN6 1127 aaKnown RBP12.33□□□□□ -0.43
DEPDC1-201ENST00000370966 ACTL9Q8TC94 416 aa12.33□□□□□ -0.43
DEPDC1-201ENST00000370966 HAS1Q92839 578 aa12.33□□□□□ -0.43
DEPDC1-201ENST00000370966 TATDN2Q93075 761 aa12.33□□□□□ -0.43
DEPDC1-201ENST00000370966 ACSF2Q96CM8 615 aaPredicted RBP12.33□□□□□ -0.43
DEPDC1-201ENST00000370966 MRPL1Q9BYD6 325 aaKnown RBP12.33□□□□□ -0.43
DEPDC1-201ENST00000370966 SLC40A1Q9NP59 571 aa12.33□□□□□ -0.43
DEPDC1-201ENST00000370966 NDFIP2Q9NV92 336 aa12.33□□□□□ -0.43
DEPDC1-201ENST00000370966 PCDHA3Q9Y5H8 950 aa12.33□□□□□ -0.43
DEPDC1-201ENST00000370966 PIK3CDO00329 1044 aa12.33□□□□□ -0.44
DEPDC1-201ENST00000370966 O00370 1275 aa12.33□□□□□ -0.44
DEPDC1-201ENST00000370966 ZNF197O14709 1029 aa12.33□□□□□ -0.44
DEPDC1-201ENST00000370966 ANGPT2O15123 496 aa12.33□□□□□ -0.44
DEPDC1-201ENST00000370966 TLR2O60603 784 aa12.33□□□□□ -0.44
DEPDC1-201ENST00000370966 KCNA2P16389 499 aa12.33□□□□□ -0.44
DEPDC1-201ENST00000370966 SNX17Q15036 470 aa12.33□□□□□ -0.44
DEPDC1-201ENST00000370966 ARID3BQ8IVW6 561 aaPredicted RBP12.33□□□□□ -0.44
DEPDC1-201ENST00000370966 AENQ8WTP8 325 aaKnown RBP12.33□□□□□ -0.44
DEPDC1-201ENST00000370966 DNAJC19Q96DA6 116 aa12.33□□□□□ -0.44
DEPDC1-201ENST00000370966 TMEM176AQ96HP8 235 aa12.33□□□□□ -0.44
DEPDC1-201ENST00000370966 ASPSCR1Q9BZE9 553 aa12.33□□□□□ -0.44
DEPDC1-201ENST00000370966 ABCF3Q9NUQ8 709 aa12.33□□□□□ -0.44
DEPDC1-201ENST00000370966 DDIT4Q9NX09 232 aa12.33□□□□□ -0.44
DEPDC1-201ENST00000370966 KCNH4Q9UQ05 1017 aa12.33□□□□□ -0.44
DEPDC1-201ENST00000370966 FER1L4A9Z1Z3 1794 aa12.33□□□□□ -0.44
DEPDC1-201ENST00000370966 M0QYT0 321 aa12.33□□□□□ -0.44
DEPDC1-201ENST00000370966 SLC2A3P11169 496 aa12.33□□□□□ -0.44
DEPDC1-201ENST00000370966 VEGFAP15692 232 aaPredicted RBP12.33□□□□□ -0.44
DEPDC1-201ENST00000370966 PTK6Q13882 451 aa12.33□□□□□ -0.44
DEPDC1-201ENST00000370966 KCNT1Q5JUK3 1230 aa12.33□□□□□ -0.44
DEPDC1-201ENST00000370966 PCYOX1LQ8NBM8 494 aa12.33□□□□□ -0.44
DEPDC1-201ENST00000370966 FBXO36Q8NEA4 188 aa12.33□□□□□ -0.44
DEPDC1-201ENST00000370966 PBXIP1Q96AQ6 731 aa12.33□□□□□ -0.44
DEPDC1-201ENST00000370966 ZFYVE28Q9HCC9 887 aa12.33□□□□□ -0.44
DEPDC1-201ENST00000370966 TMEM51Q9NW97 253 aa12.33□□□□□ -0.44
DEPDC1-201ENST00000370966 HACD3Q9P035 362 aa12.33□□□□□ -0.44
DEPDC1-201ENST00000370966 PHTF1Q9UMS5 762 aa12.33□□□□□ -0.44
DEPDC1-201ENST00000370966 GLRA3O75311 464 aa12.33□□□□□ -0.44
DEPDC1-201ENST00000370966 PYGLP06737 847 aa12.33□□□□□ -0.44
DEPDC1-201ENST00000370966 HNRNPH3P31942 346 aaKnown RBP12.33□□□□□ -0.44
DEPDC1-201ENST00000370966 ERVK-9P63128 1117 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms