RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 HAPLN1P10915 354 aaPredicted RBP15.79■□□□□ 0.12
COL9A1-204ENST00000370496 CDK11BP21127 795 aaKnown RBP15.79■□□□□ 0.12
COL9A1-204ENST00000370496 CYP2F1P24903 491 aa15.79■□□□□ 0.12
COL9A1-204ENST00000370496 RPL10AP62906 217 aaKnown RBP15.79■□□□□ 0.12
COL9A1-204ENST00000370496 KRT31Q15323 416 aa15.79■□□□□ 0.12
COL9A1-204ENST00000370496 TAF12Q16514 161 aa15.79■□□□□ 0.12
COL9A1-204ENST00000370496 ZNF394Q53GI3 561 aa15.79■□□□□ 0.12
COL9A1-204ENST00000370496 MIIPQ5JXC2 388 aa15.79■□□□□ 0.12
COL9A1-204ENST00000370496 TRIM65Q6PJ69 517 aa15.79■□□□□ 0.12
COL9A1-204ENST00000370496 ITIH5Q86UX2 942 aa15.79■□□□□ 0.12
COL9A1-204ENST00000370496 SCN4BQ8IWT1 228 aa15.79■□□□□ 0.12
COL9A1-204ENST00000370496 ADHFE1Q8IWW8 467 aa15.79■□□□□ 0.12
COL9A1-204ENST00000370496 TDRD5Q8NAT2 981 aaKnown RBP15.79■□□□□ 0.12
COL9A1-204ENST00000370496 EHBP1Q8NDI1 1231 aa15.79■□□□□ 0.12
COL9A1-204ENST00000370496 RPGRIP1Q96KN7 1286 aa15.79■□□□□ 0.12
COL9A1-204ENST00000370496 ZNF512Q96ME7 567 aaPredicted RBP15.79■□□□□ 0.12
COL9A1-204ENST00000370496 TWNKQ96RR1 684 aa15.79■□□□□ 0.12
COL9A1-204ENST00000370496 LPIN3Q9BQK8 851 aa15.79■□□□□ 0.12
COL9A1-204ENST00000370496 ELOVL4Q9GZR5 314 aa15.79■□□□□ 0.12
COL9A1-204ENST00000370496 FAM124BQ9H5Z6 455 aaPredicted RBP15.79■□□□□ 0.12
COL9A1-204ENST00000370496 ASAH2Q9NR71 780 aa15.79■□□□□ 0.12
COL9A1-204ENST00000370496 NR2E1Q9Y466 385 aa15.79■□□□□ 0.12
COL9A1-204ENST00000370496 RHOP08100 348 aa15.78■□□□□ 0.12
COL9A1-204ENST00000370496 CCDC130P13994 396 aa15.78■□□□□ 0.12
COL9A1-204ENST00000370496 ATF6P18850 670 aa15.78■□□□□ 0.12
COL9A1-204ENST00000370496 BDNFP23560 247 aa15.78■□□□□ 0.12
COL9A1-204ENST00000370496 FSHRP23945 695 aa15.78■□□□□ 0.12
COL9A1-204ENST00000370496 ANXA13P27216 316 aa15.78■□□□□ 0.12
COL9A1-204ENST00000370496 NTHL1P78549 312 aa15.78■□□□□ 0.12
COL9A1-204ENST00000370496 ZP2Q05996 745 aa15.78■□□□□ 0.12
COL9A1-204ENST00000370496 NCAPHQ15003 741 aa15.78■□□□□ 0.12
COL9A1-204ENST00000370496 PDZD4Q76G19 769 aaPredicted RBP15.78■□□□□ 0.12
COL9A1-204ENST00000370496 RRAGAQ7L523 313 aa15.78■□□□□ 0.12
COL9A1-204ENST00000370496 ARHGEF19Q8IW93 802 aa15.78■□□□□ 0.12
COL9A1-204ENST00000370496 DHX40Q8IX18 779 aaKnown RBP15.78■□□□□ 0.12
COL9A1-204ENST00000370496 LMO3Q8TAP4 145 aa15.78■□□□□ 0.12
COL9A1-204ENST00000370496 UHRF1Q96T88 793 aaPredicted RBP15.78■□□□□ 0.12
COL9A1-204ENST00000370496 VPS16Q9H269 839 aa15.78■□□□□ 0.12
COL9A1-204ENST00000370496 KRT82Q9NSB4 513 aa15.78■□□□□ 0.12
COL9A1-204ENST00000370496 FAM49BQ9NUQ9 324 aa15.78■□□□□ 0.12
COL9A1-204ENST00000370496 CEP72Q9P209 647 aa15.78■□□□□ 0.12
COL9A1-204ENST00000370496 MYH10P35580 1976 aa15.78■□□□□ 0.12
COL9A1-204ENST00000370496 PATJQ8NI35 1801 aa15.77■□□□□ 0.12
COL9A1-204ENST00000370496 TRIM66O15016 1216 aa15.77■□□□□ 0.12
COL9A1-204ENST00000370496 PTPN2P17706 415 aa15.77■□□□□ 0.12
COL9A1-204ENST00000370496 GBP2P32456 591 aaPredicted RBP15.77■□□□□ 0.12
COL9A1-204ENST00000370496 SSTR3P32745 418 aaPredicted RBP15.77■□□□□ 0.12
COL9A1-204ENST00000370496 GRIK1P39086 918 aa15.77■□□□□ 0.12
COL9A1-204ENST00000370496 MAGEA11P43364 429 aa15.77■□□□□ 0.12
COL9A1-204ENST00000370496 GPR15P49685 360 aa15.77■□□□□ 0.12
COL9A1-204ENST00000370496 TPM4P67936 248 aa15.77■□□□□ 0.12
COL9A1-204ENST00000370496 GCNT1Q02742 428 aa15.77■□□□□ 0.12
COL9A1-204ENST00000370496 FKBP15Q5T1M5 1219 aa15.77■□□□□ 0.12
COL9A1-204ENST00000370496 CYP4A22Q5TCH4 519 aa15.77■□□□□ 0.12
COL9A1-204ENST00000370496 VSTM1Q6UX27 236 aa15.77■□□□□ 0.12
COL9A1-204ENST00000370496 FAM35AQ86V20 835 aa15.77■□□□□ 0.12
COL9A1-204ENST00000370496 LEMD2Q8NC56 503 aa15.77■□□□□ 0.12
COL9A1-204ENST00000370496 GIPC2Q8TF65 315 aa15.77■□□□□ 0.12
COL9A1-204ENST00000370496 PSMG2Q969U7 264 aa15.77■□□□□ 0.12
COL9A1-204ENST00000370496 SMARCD1Q96GM5 515 aa15.77■□□□□ 0.12
COL9A1-204ENST00000370496 NECAB3Q96P71 396 aaPredicted RBP15.77■□□□□ 0.12
COL9A1-204ENST00000370496 B3GNT5Q9BYG0 378 aa15.77■□□□□ 0.12
COL9A1-204ENST00000370496 ZNF518BQ9C0D4 1074 aa15.77■□□□□ 0.12
COL9A1-204ENST00000370496 DNMT3BQ9UBC3 853 aaKnown RBP15.77■□□□□ 0.12
COL9A1-204ENST00000370496 ASB3Q9Y575 518 aa15.77■□□□□ 0.12
COL9A1-204ENST00000370496 VCANP13611 3396 aa15.77■□□□□ 0.11
COL9A1-204ENST00000370496 CLDN5O00501 218 aa15.76■□□□□ 0.11
COL9A1-204ENST00000370496 CAVIN2O95810 425 aa15.76■□□□□ 0.11
COL9A1-204ENST00000370496 MYL4P12829 197 aa15.76■□□□□ 0.11
COL9A1-204ENST00000370496 ZNF18P17022 549 aa15.76■□□□□ 0.11
COL9A1-204ENST00000370496 SLC9A1P19634 815 aa15.76■□□□□ 0.11
COL9A1-204ENST00000370496 ADORA2BP29275 332 aa15.76■□□□□ 0.11
COL9A1-204ENST00000370496 COPB1P53618 953 aaKnown RBP15.76■□□□□ 0.11
COL9A1-204ENST00000370496 DDR2Q16832 855 aa15.76■□□□□ 0.11
COL9A1-204ENST00000370496 SDHAF4Q5VUM1 108 aa15.76■□□□□ 0.11
COL9A1-204ENST00000370496 OTOP3Q7RTS5 596 aa15.76■□□□□ 0.11
COL9A1-204ENST00000370496 CRYBG2Q8N1P7 616 aa15.76■□□□□ 0.11
COL9A1-204ENST00000370496 C12orf29Q8N999 325 aa15.76■□□□□ 0.11
COL9A1-204ENST00000370496 STKLD1Q8NE28 680 aa15.76■□□□□ 0.11
COL9A1-204ENST00000370496 SLC2A14Q8TDB8 520 aa15.76■□□□□ 0.11
COL9A1-204ENST00000370496 GPR152Q8TDT2 470 aa15.76■□□□□ 0.11
COL9A1-204ENST00000370496 WHAMMQ8TF30 809 aa15.76■□□□□ 0.11
COL9A1-204ENST00000370496 KAT5Q92993 513 aa15.76■□□□□ 0.11
COL9A1-204ENST00000370496 ACSF2Q96CM8 615 aaPredicted RBP15.76■□□□□ 0.11
COL9A1-204ENST00000370496 DOCK6Q96HP0 2047 aa15.76■□□□□ 0.11
COL9A1-204ENST00000370496 FAM81BQ96LP2 452 aa15.76■□□□□ 0.11
COL9A1-204ENST00000370496 GCNAQ96QF7 691 aa15.76■□□□□ 0.11
COL9A1-204ENST00000370496 CBX8Q9HC52 389 aa15.76■□□□□ 0.11
COL9A1-204ENST00000370496 APEX2Q9UBZ4 518 aa15.76■□□□□ 0.11
COL9A1-204ENST00000370496 MRPS23Q9Y3D9 190 aaKnown RBP15.76■□□□□ 0.11
COL9A1-204ENST00000370496 PCDHB4Q9Y5E5 795 aa15.76■□□□□ 0.11
COL9A1-204ENST00000370496 MYO16Q9Y6X6 1858 aa15.76■□□□□ 0.11
COL9A1-204ENST00000370496 C2CD4DB7Z1M9 353 aa15.75■□□□□ 0.11
COL9A1-204ENST00000370496 PON1P27169 355 aa15.75■□□□□ 0.11
COL9A1-204ENST00000370496 RAD23BP54727 409 aa15.75■□□□□ 0.11
COL9A1-204ENST00000370496 PHLDB3Q6NSJ2 640 aa15.75■□□□□ 0.11
COL9A1-204ENST00000370496 TMEM270Q6UE05 265 aa15.75■□□□□ 0.11
COL9A1-204ENST00000370496 ENOSF1Q7L5Y1 443 aa15.75■□□□□ 0.11
COL9A1-204ENST00000370496 FUKQ8N0W3 1084 aa15.75■□□□□ 0.11
COL9A1-204ENST00000370496 ING5Q8WYH8 240 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms