RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 KCNV2Q8TDN2 545 aa7.3□□□□□ -1.24
CSDE1-204ENST00000369530 ARL8AQ96BM9 186 aa7.3□□□□□ -1.24
CSDE1-204ENST00000369530 NAF1Q96HR8 494 aaKnown RBP7.3□□□□□ -1.24
CSDE1-204ENST00000369530 CDK5RAP3Q96JB5 506 aa7.3□□□□□ -1.24
CSDE1-204ENST00000369530 FDXACB1Q9BRP7 624 aaPredicted RBP7.3□□□□□ -1.24
CSDE1-204ENST00000369530 TMEM117Q9H0C3 514 aa7.3□□□□□ -1.24
CSDE1-204ENST00000369530 FAM105AQ9NUU6 356 aa7.3□□□□□ -1.24
CSDE1-204ENST00000369530 L3MBTL1Q9Y468 752 aa7.3□□□□□ -1.24
CSDE1-204ENST00000369530 CCDC162PA2VCL2 907 aa7.3□□□□□ -1.24
CSDE1-204ENST00000369530 GMNCA6NCL1 334 aa7.3□□□□□ -1.24
CSDE1-204ENST00000369530 BHMG1C9JSJ3 638 aaPredicted RBP7.3□□□□□ -1.24
CSDE1-204ENST00000369530 MAP3K13O43283 966 aa7.3□□□□□ -1.24
CSDE1-204ENST00000369530 OXCT1P55809 520 aa7.3□□□□□ -1.24
CSDE1-204ENST00000369530 ZP2Q05996 745 aa7.3□□□□□ -1.24
CSDE1-204ENST00000369530 CTTNQ14247 550 aaKnown RBP7.3□□□□□ -1.24
CSDE1-204ENST00000369530 MXD4Q14582 209 aaPredicted RBP7.3□□□□□ -1.24
CSDE1-204ENST00000369530 NR1I3Q14994 352 aa7.3□□□□□ -1.24
CSDE1-204ENST00000369530 RAD9BQ6WBX8 426 aa7.3□□□□□ -1.24
CSDE1-204ENST00000369530 ZNF720Q7Z2F6 126 aa7.3□□□□□ -1.24
CSDE1-204ENST00000369530 TMEM150AQ86TG1 271 aa7.3□□□□□ -1.24
CSDE1-204ENST00000369530 SLC15A3Q8IY34 581 aa7.3□□□□□ -1.24
CSDE1-204ENST00000369530 SLC35F6Q8N357 371 aa7.3□□□□□ -1.24
CSDE1-204ENST00000369530 MYLIPQ8WY64 445 aa7.3□□□□□ -1.24
CSDE1-204ENST00000369530 PTPRN2Q92932 1015 aa7.3□□□□□ -1.24
CSDE1-204ENST00000369530 HVCN1Q96D96 273 aa7.3□□□□□ -1.24
CSDE1-204ENST00000369530 SEC16BQ96JE7 1060 aa7.3□□□□□ -1.24
CSDE1-204ENST00000369530 TGS1Q96RS0 853 aaKnown RBP7.3□□□□□ -1.24
CSDE1-204ENST00000369530 GPRC5CQ9NQ84 441 aa7.3□□□□□ -1.24
CSDE1-204ENST00000369530 GALNT8Q9NY28 637 aa7.3□□□□□ -1.24
CSDE1-204ENST00000369530 G3BP2Q9UN86 482 aaKnown RBP7.3□□□□□ -1.24
CSDE1-204ENST00000369530 DERAQ9Y315 318 aa7.3□□□□□ -1.24
CSDE1-204ENST00000369530 MYMKA6NI61 221 aa7.29□□□□□ -1.24
CSDE1-204ENST00000369530 GABRDO14764 452 aa7.29□□□□□ -1.24
CSDE1-204ENST00000369530 MAPK13O15264 365 aa7.29□□□□□ -1.24
CSDE1-204ENST00000369530 GAS7O60861 476 aa7.29□□□□□ -1.24
CSDE1-204ENST00000369530 CPA3P15088 417 aa7.29□□□□□ -1.24
CSDE1-204ENST00000369530 PRLRP16471 622 aa7.29□□□□□ -1.24
CSDE1-204ENST00000369530 CD97P48960 835 aa7.29□□□□□ -1.24
CSDE1-204ENST00000369530 PRPF4BQ13523 1007 aaKnown RBP7.29□□□□□ -1.24
CSDE1-204ENST00000369530 GALNTL6Q49A17 601 aa7.29□□□□□ -1.24
CSDE1-204ENST00000369530 GLIS3Q8NEA6 775 aa7.29□□□□□ -1.24
CSDE1-204ENST00000369530 SYMPKQ92797 1274 aaKnown RBP7.29□□□□□ -1.24
CSDE1-204ENST00000369530 BLZF1Q9H2G9 400 aa7.29□□□□□ -1.24
CSDE1-204ENST00000369530 TBC1D13Q9NVG8 400 aa7.29□□□□□ -1.24
CSDE1-204ENST00000369530 PCDHA12Q9UN75 941 aa7.29□□□□□ -1.24
CSDE1-204ENST00000369530 UBE4BO95155 1302 aa7.29□□□□□ -1.24
CSDE1-204ENST00000369530 A0A1B0GTH6 734 aa7.29□□□□□ -1.24
CSDE1-204ENST00000369530 ARL5CA6NH57 179 aa7.29□□□□□ -1.24
CSDE1-204ENST00000369530 ATP9BO43861 1147 aa7.29□□□□□ -1.24
CSDE1-204ENST00000369530 GREM1O60565 184 aa7.29□□□□□ -1.24
CSDE1-204ENST00000369530 CLASP2O75122 1294 aaKnown RBP7.29□□□□□ -1.24
CSDE1-204ENST00000369530 RECQL4O94761 1208 aa7.29□□□□□ -1.24
CSDE1-204ENST00000369530 TCF3P15923 654 aa7.29□□□□□ -1.24
CSDE1-204ENST00000369530 SP100P23497 879 aaPredicted RBP7.29□□□□□ -1.24
CSDE1-204ENST00000369530 DPYDQ12882 1025 aa7.29□□□□□ -1.24
CSDE1-204ENST00000369530 SLC10A6Q3KNW5 377 aa7.29□□□□□ -1.24
CSDE1-204ENST00000369530 DTHD1Q6ZMT9 781 aa7.29□□□□□ -1.24
CSDE1-204ENST00000369530 OTOP2Q7RTS6 562 aa7.29□□□□□ -1.24
CSDE1-204ENST00000369530 TMC8Q8IU68 726 aa7.29□□□□□ -1.24
CSDE1-204ENST00000369530 ALDH16A1Q8IZ83 802 aa7.29□□□□□ -1.24
CSDE1-204ENST00000369530 ARFGAP2Q8N6H7 521 aa7.29□□□□□ -1.24
CSDE1-204ENST00000369530 KIAA0895Q8NCT3 520 aa7.29□□□□□ -1.24
CSDE1-204ENST00000369530 PHC3Q8NDX5 983 aa7.29□□□□□ -1.24
CSDE1-204ENST00000369530 GDAP1L1Q96MZ0 367 aa7.29□□□□□ -1.24
CSDE1-204ENST00000369530 TRPV4Q9HBA0 871 aa7.29□□□□□ -1.24
CSDE1-204ENST00000369530 GIT1Q9Y2X7 761 aa7.29□□□□□ -1.24
CSDE1-204ENST00000369530 WDR87Q6ZQQ6 2873 aa7.29□□□□□ -1.24
CSDE1-204ENST00000369530 FAM92AA1XBS5 289 aa7.29□□□□□ -1.24
CSDE1-204ENST00000369530 CCT8L1PA6NM43 557 aa7.29□□□□□ -1.24
CSDE1-204ENST00000369530 GPR182O15218 404 aa7.29□□□□□ -1.24
CSDE1-204ENST00000369530 BMP15O95972 392 aa7.29□□□□□ -1.24
CSDE1-204ENST00000369530 MYCP01106 439 aaPredicted RBP7.29□□□□□ -1.24
CSDE1-204ENST00000369530 PLS3P13797 630 aa7.29□□□□□ -1.24
CSDE1-204ENST00000369530 STAT6P42226 847 aa7.29□□□□□ -1.24
CSDE1-204ENST00000369530 MARSP56192 900 aaKnown RBP7.29□□□□□ -1.24
CSDE1-204ENST00000369530 CDK17Q00537 523 aa7.29□□□□□ -1.24
CSDE1-204ENST00000369530 LSAMPQ13449 338 aa7.29□□□□□ -1.24
CSDE1-204ENST00000369530 CCDC92Q53HC0 331 aaPredicted RBP7.29□□□□□ -1.24
CSDE1-204ENST00000369530 RNF187Q5TA31 235 aaPredicted RBP7.29□□□□□ -1.24
CSDE1-204ENST00000369530 IRGCQ6NXR0 463 aa7.29□□□□□ -1.24
CSDE1-204ENST00000369530 APTXQ7Z2E3 356 aaKnown RBP7.29□□□□□ -1.24
CSDE1-204ENST00000369530 BMP8AQ7Z5Y6 402 aa7.29□□□□□ -1.24
CSDE1-204ENST00000369530 LRRC71Q8N4P6 559 aa7.29□□□□□ -1.24
CSDE1-204ENST00000369530 ENDOVQ8N8Q3 282 aaKnown RBP7.29□□□□□ -1.24
CSDE1-204ENST00000369530 LNX1Q8TBB1 728 aaPredicted RBP7.29□□□□□ -1.24
CSDE1-204ENST00000369530 OSMRQ99650 979 aa7.29□□□□□ -1.24
CSDE1-204ENST00000369530 PAAF1Q9BRP4 392 aa7.29□□□□□ -1.24
CSDE1-204ENST00000369530 CCDC134Q9H6E4 229 aa7.29□□□□□ -1.24
CSDE1-204ENST00000369530 PIDD1Q9HB75 910 aa7.29□□□□□ -1.24
CSDE1-204ENST00000369530 TMEM165Q9HC07 324 aa7.29□□□□□ -1.24
CSDE1-204ENST00000369530 TBCCD1Q9NVR7 557 aa7.29□□□□□ -1.24
CSDE1-204ENST00000369530 DNAJB4Q9UDY4 337 aa7.29□□□□□ -1.24
CSDE1-204ENST00000369530 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.29□□□□□ -1.243e-6■■■■□ 21.1
CSDE1-204ENST00000369530 RWDD3Q9Y3V2 267 aa7.29□□□□□ -1.24
CSDE1-204ENST00000369530 MYH10P35580 1976 aa7.28□□□□□ -1.24
CSDE1-204ENST00000369530 LINC01565O15544 149 aa7.28□□□□□ -1.24
CSDE1-204ENST00000369530 CEP104O60308 925 aa7.28□□□□□ -1.24
CSDE1-204ENST00000369530 CTSAP10619 480 aa7.28□□□□□ -1.24
CSDE1-204ENST00000369530 ATP1A3P13637 1013 aa7.28□□□□□ -1.24
CSDE1-204ENST00000369530 NR1D1P20393 614 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms