RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 POU1F1P28069 291 aa18.87■□□□□ 0.61
SNX27-202ENST00000368841 TRAF7Q6Q0C0 670 aa18.87■□□□□ 0.61
SNX27-202ENST00000368841 FAM111AQ96PZ2 611 aa18.87■□□□□ 0.61
SNX27-202ENST00000368841 KCNH7Q9NS40 1196 aa18.87■□□□□ 0.61
SNX27-202ENST00000368841 TRMT6Q9UJA5 497 aaKnown RBP18.87■□□□□ 0.61
SNX27-202ENST00000368841 ALDH1A2O94788 518 aa18.87■□□□□ 0.61
SNX27-202ENST00000368841 RGS4P49798 205 aa18.87■□□□□ 0.61
SNX27-202ENST00000368841 PPP1R13LQ8WUF5 828 aa18.87■□□□□ 0.61
SNX27-202ENST00000368841 SLC37A4O43826 429 aa18.86■□□□□ 0.61
SNX27-202ENST00000368841 SRGNP10124 158 aa18.86■□□□□ 0.61
SNX27-202ENST00000368841 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.86■□□□□ 0.61
SNX27-202ENST00000368841 AP1G2O75843 785 aa18.86■□□□□ 0.61
SNX27-202ENST00000368841 FNTAP49354 379 aa18.86■□□□□ 0.61
SNX27-202ENST00000368841 ZNF177Q13360 481 aaPredicted RBP18.86■□□□□ 0.61
SNX27-202ENST00000368841 TRADDQ15628 312 aa18.86■□□□□ 0.61
SNX27-202ENST00000368841 PRR5LQ6MZQ0 368 aa18.86■□□□□ 0.61
SNX27-202ENST00000368841 NOTUMQ6P988 496 aa18.86■□□□□ 0.61
SNX27-202ENST00000368841 CAAP1Q9H8G2 361 aa18.86■□□□□ 0.61
SNX27-202ENST00000368841 USP15Q9Y4E8 981 aaPredicted RBP18.86■□□□□ 0.61
SNX27-202ENST00000368841 TSPAN3O60637 253 aa18.86■□□□□ 0.61
SNX27-202ENST00000368841 PRIM2P49643 509 aa18.86■□□□□ 0.61
SNX27-202ENST00000368841 CLK1P49759 484 aaKnown RBP18.86■□□□□ 0.61
SNX27-202ENST00000368841 CPT1AP50416 773 aa18.86■□□□□ 0.61
SNX27-202ENST00000368841 DCP1BQ8IZD4 617 aaKnown RBP18.86■□□□□ 0.61
SNX27-202ENST00000368841 EPS8L3Q8TE67 593 aaKnown RBP18.86■□□□□ 0.61
SNX27-202ENST00000368841 CFAP73A6NFT4 308 aa18.86■□□□□ 0.61
SNX27-202ENST00000368841 AGTP01019 485 aa18.86■□□□□ 0.61
SNX27-202ENST00000368841 CCT8L2Q96SF2 557 aa18.86■□□□□ 0.61
SNX27-202ENST00000368841 CCT7Q99832 543 aa18.86■□□□□ 0.61
SNX27-202ENST00000368841 TMEM245Q9H330 911 aa18.86■□□□□ 0.61
SNX27-202ENST00000368841 CHST12Q9NRB3 414 aa18.86■□□□□ 0.61
SNX27-202ENST00000368841 RGS5O15539 181 aa18.86■□□□□ 0.61
SNX27-202ENST00000368841 IL18RAPO95256 599 aa18.86■□□□□ 0.61
SNX27-202ENST00000368841 SPRP35270 261 aaPredicted RBP18.86■□□□□ 0.61
SNX27-202ENST00000368841 PDK1Q15118 436 aa18.86■□□□□ 0.61
SNX27-202ENST00000368841 SNRNP27Q8WVK2 155 aaKnown RBP18.86■□□□□ 0.61
SNX27-202ENST00000368841 PPP2R3CQ969Q6 453 aa18.86■□□□□ 0.61
SNX27-202ENST00000368841 ZIM3Q96PE6 472 aa18.86■□□□□ 0.61
SNX27-202ENST00000368841 JMJD4Q9H9V9 463 aa18.86■□□□□ 0.61
SNX27-202ENST00000368841 ZDHHC9Q9Y397 364 aa18.86■□□□□ 0.61
SNX27-202ENST00000368841 GSSP48637 474 aa18.86■□□□□ 0.61
SNX27-202ENST00000368841 SEC24CP53992 1094 aa18.86■□□□□ 0.61
SNX27-202ENST00000368841 IGDCC4Q8TDY8 1250 aa18.86■□□□□ 0.61
SNX27-202ENST00000368841 FBXO28Q9NVF7 368 aa18.86■□□□□ 0.61
SNX27-202ENST00000368841 A0A1W2PQC6 194 aa18.85■□□□□ 0.61
SNX27-202ENST00000368841 ODC1P11926 461 aa18.85■□□□□ 0.61
SNX27-202ENST00000368841 TGM2P21980 687 aa18.85■□□□□ 0.61
SNX27-202ENST00000368841 CYP2C19P33261 490 aa18.85■□□□□ 0.61
SNX27-202ENST00000368841 DNAJC3Q13217 504 aa18.85■□□□□ 0.61
SNX27-202ENST00000368841 TP53BP2Q13625 1128 aa18.85■□□□□ 0.61
SNX27-202ENST00000368841 BARGINQ6ZT62 677 aa18.85■□□□□ 0.61
SNX27-202ENST00000368841 FEZF2Q8TBJ5 459 aa18.85■□□□□ 0.61
SNX27-202ENST00000368841 MT-CO1P00395 513 aa18.85■□□□□ 0.61
SNX27-202ENST00000368841 GPC1P35052 558 aa18.85■□□□□ 0.61
SNX27-202ENST00000368841 CLCN3P51790 818 aa18.85■□□□□ 0.61
SNX27-202ENST00000368841 TIMM13Q9Y5L4 95 aaPredicted RBP18.85■□□□□ 0.61
SNX27-202ENST00000368841 POLR1AO95602 1720 aaPredicted RBP18.85■□□□□ 0.61
SNX27-202ENST00000368841 VWA5AO00534 786 aa18.85■□□□□ 0.61
SNX27-202ENST00000368841 SH3BGRLO75368 114 aa18.85■□□□□ 0.61
SNX27-202ENST00000368841 FGFR1P11362 822 aa18.85■□□□□ 0.61
SNX27-202ENST00000368841 DPEP1P16444 411 aa18.85■□□□□ 0.61
SNX27-202ENST00000368841 ACO1P21399 889 aaKnown RBP18.85■□□□□ 0.61
SNX27-202ENST00000368841 CYP51A1Q16850 503 aa18.85■□□□□ 0.61
SNX27-202ENST00000368841 PHACTR4Q8IZ21 702 aa18.85■□□□□ 0.61
SNX27-202ENST00000368841 C7orf25Q9BPX7 421 aa18.85■□□□□ 0.61
SNX27-202ENST00000368841 SUPT7LO94864 414 aa18.85■□□□□ 0.61
SNX27-202ENST00000368841 EFEMP1Q12805 493 aa18.85■□□□□ 0.61
SNX27-202ENST00000368841 B3GALNT2Q8NCR0 500 aa18.85■□□□□ 0.61
SNX27-202ENST00000368841 TMEM8AQ9HCN3 771 aa18.85■□□□□ 0.61
SNX27-202ENST00000368841 RNF19AQ9NV58 838 aa18.85■□□□□ 0.61
SNX27-202ENST00000368841 STAU1O95793 577 aaKnown RBP18.85■□□□□ 0.61
SNX27-202ENST00000368841 GSTM1P09488 218 aa18.85■□□□□ 0.61
SNX27-202ENST00000368841 ITIH2P19823 946 aa18.85■□□□□ 0.61
SNX27-202ENST00000368841 KHDRBS2Q5VWX1 349 aaKnown RBP18.85■□□□□ 0.61
SNX27-202ENST00000368841 CENPLQ8N0S6 344 aaPredicted RBP18.85■□□□□ 0.61
SNX27-202ENST00000368841 TSEN34Q9BSV6 310 aaKnown RBP18.85■□□□□ 0.61
SNX27-202ENST00000368841 SLC38A7Q9NVC3 462 aa18.85■□□□□ 0.61
SNX27-202ENST00000368841 ERAP1Q9NZ08 941 aa18.85■□□□□ 0.61
SNX27-202ENST00000368841 NBPF9Q3BBW0 867 aa18.84■□□□□ 0.61
SNX27-202ENST00000368841 ZNF786Q8N393 782 aa18.84■□□□□ 0.61
SNX27-202ENST00000368841 GRAMD1AQ96CP6 724 aa18.84■□□□□ 0.61
SNX27-202ENST00000368841 OVOS2A0A0G2JMS6 1433 aa18.84■□□□□ 0.61
SNX27-202ENST00000368841 OVOS2A0A0J9YW53 1432 aa18.84■□□□□ 0.61
SNX27-202ENST00000368841 OVOS2Q6IE36 1432 aa18.84■□□□□ 0.61
SNX27-202ENST00000368841 IGF2BP3O00425 579 aaKnown RBP eCLIP18.84■□□□□ 0.61
SNX27-202ENST00000368841 DLGAP3O95886 979 aa18.84■□□□□ 0.61
SNX27-202ENST00000368841 FGFR2P21802 821 aa18.84■□□□□ 0.61
SNX27-202ENST00000368841 STRIP1Q5VSL9 837 aa18.84■□□□□ 0.61
SNX27-202ENST00000368841 EPB41L4AQ9HCS5 686 aaPredicted RBP18.84■□□□□ 0.61
SNX27-202ENST00000368841 PAK5Q9P286 719 aa18.84■□□□□ 0.61
SNX27-202ENST00000368841 FEN1P39748 380 aaKnown RBP18.84■□□□□ 0.61
SNX27-202ENST00000368841 E2F7Q96AV8 911 aa18.84■□□□□ 0.61
SNX27-202ENST00000368841 SERPINB4P48594 390 aa18.84■□□□□ 0.61
SNX27-202ENST00000368841 NT5DC3Q86UY8 548 aa18.84■□□□□ 0.61
SNX27-202ENST00000368841 HEATR4Q86WZ0 1026 aa18.84■□□□□ 0.61
SNX27-202ENST00000368841 DPF3Q92784 378 aa18.84■□□□□ 0.61
SNX27-202ENST00000368841 WDR19Q8NEZ3 1342 aa18.84■□□□□ 0.61
SNX27-202ENST00000368841 ALDH9A1P49189 494 aa18.84■□□□□ 0.61
SNX27-202ENST00000368841 HIST2H2ACQ16777 129 aaPredicted RBP18.84■□□□□ 0.61
SNX27-202ENST00000368841 GJC2Q5T442 439 aaPredicted RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms