RNA–Protein interactions for RNA: ENST00000368301.6

LMNA-207, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-207ENST00000368301 NPLOC4Q8TAT6 608 aa19.08■□□□□ 0.65
LMNA-207ENST00000368301 GTF3C2Q8WUA4 911 aaPredicted RBP19.08■□□□□ 0.65
LMNA-207ENST00000368301 PIWIL1Q96J94 861 aaKnown RBP19.08■□□□□ 0.65
LMNA-207ENST00000368301 ACAP3Q96P50 834 aa19.08■□□□□ 0.65
LMNA-207ENST00000368301 FAM49AQ9H0Q0 323 aaPredicted RBP19.08■□□□□ 0.65
LMNA-207ENST00000368301 CDHR5Q9HBB8 845 aa19.08■□□□□ 0.65
LMNA-207ENST00000368301 COL1A2P08123 1366 aa19.08■□□□□ 0.64
LMNA-207ENST00000368301 A0A1B0GUA9 196 aa19.08■□□□□ 0.64
LMNA-207ENST00000368301 GPD2P43304 727 aa19.08■□□□□ 0.64
LMNA-207ENST00000368301 HP1BP3Q5SSJ5 553 aaPredicted RBP19.08■□□□□ 0.64
LMNA-207ENST00000368301 SH3PXD2AQ5TCZ1 1133 aa19.08■□□□□ 0.64
LMNA-207ENST00000368301 B4GALNT4Q76KP1 1039 aa19.08■□□□□ 0.64
LMNA-207ENST00000368301 VRTNQ9H8Y1 702 aa19.08■□□□□ 0.64
LMNA-207ENST00000368301 DDX56Q9NY93 547 aaKnown RBP19.08■□□□□ 0.64
LMNA-207ENST00000368301 MORF4L1Q9UBU8 362 aa19.08■□□□□ 0.64
LMNA-207ENST00000368301 DDX20Q9UHI6 824 aaKnown RBP19.08■□□□□ 0.64
LMNA-207ENST00000368301 SCN1AP35498 2009 aa19.07■□□□□ 0.64
LMNA-207ENST00000368301 ATICP31939 592 aa19.07■□□□□ 0.64
LMNA-207ENST00000368301 PTPN7P35236 360 aa19.07■□□□□ 0.64
LMNA-207ENST00000368301 VCPP55072 806 aaKnown RBP19.07■□□□□ 0.64
LMNA-207ENST00000368301 COPS2P61201 443 aa19.07■□□□□ 0.64
LMNA-207ENST00000368301 GPS1Q13098 491 aa19.07■□□□□ 0.64
LMNA-207ENST00000368301 DUSP28Q4G0W2 176 aa19.07■□□□□ 0.64
LMNA-207ENST00000368301 PRAMEF19Q5SWL8 479 aa19.07■□□□□ 0.64
LMNA-207ENST00000368301 KIF12Q96FN5 646 aa19.07■□□□□ 0.64
LMNA-207ENST00000368301 PTPN18Q99952 460 aa19.07■□□□□ 0.64
LMNA-207ENST00000368301 STRNO43815 780 aa19.07■□□□□ 0.64
LMNA-207ENST00000368301 NPTXRO95502 500 aa19.07■□□□□ 0.64
LMNA-207ENST00000368301 GTF2A2P52657 109 aa19.07■□□□□ 0.64
LMNA-207ENST00000368301 SF3A3Q12874 501 aaKnown RBP eCLIP19.07■□□□□ 0.64
LMNA-207ENST00000368301 ACVR2BQ13705 512 aa19.07■□□□□ 0.64
LMNA-207ENST00000368301 GRB14Q14449 540 aa19.07■□□□□ 0.64
LMNA-207ENST00000368301 TRNP1Q6NT89 227 aa19.07■□□□□ 0.64
LMNA-207ENST00000368301 DRICH1Q6PGQ1 229 aaPredicted RBP19.07■□□□□ 0.64
LMNA-207ENST00000368301 ZNF467Q7Z7K2 595 aaPredicted RBP19.07■□□□□ 0.64
LMNA-207ENST00000368301 CYP4X1Q8N118 509 aa19.07■□□□□ 0.64
LMNA-207ENST00000368301 LENG1Q96BZ8 264 aaPredicted RBP19.07■□□□□ 0.64
LMNA-207ENST00000368301 ZMAT2Q96NC0 199 aaKnown RBP19.07■□□□□ 0.64
LMNA-207ENST00000368301 ROPN1BQ9BZX4 212 aaPredicted RBP19.07■□□□□ 0.64
LMNA-207ENST00000368301 ROPN1Q9HAT0 212 aaPredicted RBP19.07■□□□□ 0.64
LMNA-207ENST00000368301 HES2Q9Y543 173 aa19.07■□□□□ 0.64
LMNA-207ENST00000368301 DRD4P21917 467 aa19.06■□□□□ 0.64
LMNA-207ENST00000368301 PLCB3Q01970 1234 aa19.06■□□□□ 0.64
LMNA-207ENST00000368301 FASTKD3Q14CZ7 662 aaKnown RBP19.06■□□□□ 0.64
LMNA-207ENST00000368301 FAM182AQ5T1J6 154 aa19.06■□□□□ 0.64
LMNA-207ENST00000368301 CYP4F22Q6NT55 531 aa19.06■□□□□ 0.64
LMNA-207ENST00000368301 POLNQ7Z5Q5 900 aa19.06■□□□□ 0.64
LMNA-207ENST00000368301 MCRS1Q96EZ8 462 aa19.06■□□□□ 0.64
LMNA-207ENST00000368301 RBM15Q96T37 977 aaKnown RBP eCLIP19.06■□□□□ 0.646e-7■■□□□ 14.4
LMNA-207ENST00000368301 TINF2Q9BSI4 451 aa19.06■□□□□ 0.64
LMNA-207ENST00000368301 EIF2AQ9BY44 585 aaKnown RBP19.06■□□□□ 0.64
LMNA-207ENST00000368301 CYP3A43Q9HB55 503 aa19.06■□□□□ 0.64
LMNA-207ENST00000368301 SNTG2Q9NY99 539 aa19.06■□□□□ 0.64
LMNA-207ENST00000368301 BARX2Q9UMQ3 279 aaPredicted RBP19.06■□□□□ 0.64
LMNA-207ENST00000368301 DNALI1O14645 258 aaPredicted RBP19.06■□□□□ 0.64
LMNA-207ENST00000368301 IFNB1P01574 187 aa19.06■□□□□ 0.64
LMNA-207ENST00000368301 MIPP30301 263 aa19.06■□□□□ 0.64
LMNA-207ENST00000368301 HOXA11P31270 313 aaPredicted RBP19.06■□□□□ 0.64
LMNA-207ENST00000368301 LIG3P49916 1009 aa19.06■□□□□ 0.64
LMNA-207ENST00000368301 GDF10P55107 478 aa19.06■□□□□ 0.64
LMNA-207ENST00000368301 OTUD4Q01804 1114 aaKnown RBP19.06■□□□□ 0.64
LMNA-207ENST00000368301 CNGA2Q16280 664 aa19.06■□□□□ 0.64
LMNA-207ENST00000368301 FAM102AQ5T9C2 384 aaPredicted RBP19.06■□□□□ 0.64
LMNA-207ENST00000368301 ZCCHC9Q8N567 271 aaKnown RBP19.06■□□□□ 0.64
LMNA-207ENST00000368301 ITGA11Q9UKX5 1188 aa19.06■□□□□ 0.64
LMNA-207ENST00000368301 NME7Q9Y5B8 376 aa19.06■□□□□ 0.64
LMNA-207ENST00000368301 CST8O60676 142 aa19.05■□□□□ 0.64
LMNA-207ENST00000368301 VDRP11473 427 aa19.05■□□□□ 0.64
LMNA-207ENST00000368301 PECAM1P16284 738 aaPredicted RBP19.05■□□□□ 0.64
LMNA-207ENST00000368301 KDELR1P24390 212 aa19.05■□□□□ 0.64
LMNA-207ENST00000368301 IFNAR2P48551 515 aa19.05■□□□□ 0.64
LMNA-207ENST00000368301 RBP5P82980 135 aa19.05■□□□□ 0.64
LMNA-207ENST00000368301 IFT88Q13099 833 aa19.05■□□□□ 0.64
LMNA-207ENST00000368301 ZNF268Q14587 947 aaPredicted RBP19.05■□□□□ 0.64
LMNA-207ENST00000368301 SLC35B2Q8TB61 432 aa19.05■□□□□ 0.64
LMNA-207ENST00000368301 ACTL9Q8TC94 416 aa19.05■□□□□ 0.64
LMNA-207ENST00000368301 FNIP1Q8TF40 1166 aa19.05■□□□□ 0.64
LMNA-207ENST00000368301 HSPH1Q92598 858 aa19.05■□□□□ 0.64
LMNA-207ENST00000368301 ARHGEF2Q92974 986 aaKnown RBP19.05■□□□□ 0.64
LMNA-207ENST00000368301 NKD2Q969F2 451 aaPredicted RBP19.05■□□□□ 0.64
LMNA-207ENST00000368301 CENPTQ96BT3 561 aa19.05■□□□□ 0.64
LMNA-207ENST00000368301 PEBP4Q96S96 227 aa19.05■□□□□ 0.64
LMNA-207ENST00000368301 PRMT1Q99873 361 aaKnown RBP19.05■□□□□ 0.64
LMNA-207ENST00000368301 TBK1Q9UHD2 729 aa19.05■□□□□ 0.64
LMNA-207ENST00000368301 C2CD2Q9Y426 696 aa19.05■□□□□ 0.64
LMNA-207ENST00000368301 SGK1O00141 431 aa19.05■□□□□ 0.64
LMNA-207ENST00000368301 GRAP2O75791 330 aa19.05■□□□□ 0.64
LMNA-207ENST00000368301 PFKMP08237 780 aa19.05■□□□□ 0.64
LMNA-207ENST00000368301 MAGEA4P43358 317 aa19.05■□□□□ 0.64
LMNA-207ENST00000368301 GABRB2P47870 512 aa19.05■□□□□ 0.64
LMNA-207ENST00000368301 GCLCP48506 637 aaPredicted RBP19.05■□□□□ 0.64
LMNA-207ENST00000368301 LMNB2Q03252 620 aa19.05■□□□□ 0.64
LMNA-207ENST00000368301 INCA1Q0VD86 236 aa19.05■□□□□ 0.64
LMNA-207ENST00000368301 GLRA4Q5JXX5 417 aa19.05■□□□□ 0.64
LMNA-207ENST00000368301 ANKRD23Q86SG2 305 aa19.05■□□□□ 0.64
LMNA-207ENST00000368301 CROCCP2Q86T23 111 aa19.05■□□□□ 0.64
LMNA-207ENST00000368301 TAB3Q8N5C8 712 aaPredicted RBP19.05■□□□□ 0.64
LMNA-207ENST00000368301 BBOF1Q8ND07 529 aa19.05■□□□□ 0.64
LMNA-207ENST00000368301 SERPINB12Q96P63 405 aa19.05■□□□□ 0.64
LMNA-207ENST00000368301 ZNF317Q96PQ6 595 aaPredicted RBP19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms