RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 KNOP1Q1ED39 458 aaKnown RBP3.91□□□□□ -1.78
SYNE1-207ENST00000367255 IFIT1BQ5T764 474 aaKnown RBP3.91□□□□□ -1.78
SYNE1-207ENST00000367255 PYHIN1Q6K0P9 492 aa3.91□□□□□ -1.78
SYNE1-207ENST00000367255 POLNQ7Z5Q5 900 aa3.91□□□□□ -1.78
SYNE1-207ENST00000367255 SULF1Q8IWU6 871 aa3.91□□□□□ -1.78
SYNE1-207ENST00000367255 WDR36Q8NI36 951 aaKnown RBP3.91□□□□□ -1.78
SYNE1-207ENST00000367255 RTFDC1Q9BY42 306 aaPredicted RBP3.91□□□□□ -1.78
SYNE1-207ENST00000367255 UBE2OQ9C0C9 1292 aaKnown RBP3.91□□□□□ -1.78
SYNE1-207ENST00000367255 KBTBD4Q9NVX7 518 aa3.91□□□□□ -1.78
SYNE1-207ENST00000367255 DNM3Q9UQ16 869 aa3.91□□□□□ -1.78
SYNE1-207ENST00000367255 HSPE1-MOB4S4R3N1 261 aa3.91□□□□□ -1.78
SYNE1-207ENST00000367255 SPDYE3A6NKU9 549 aa3.91□□□□□ -1.78
SYNE1-207ENST00000367255 PSPC1Q8WXF1 523 aaKnown RBP3.91□□□□□ -1.78
SYNE1-207ENST00000367255 C9orf16Q9BUW7 83 aa3.91□□□□□ -1.78
SYNE1-207ENST00000367255 COG4Q9H9E3 785 aa3.91□□□□□ -1.78
SYNE1-207ENST00000367255 LGR6Q9HBX8 967 aa3.91□□□□□ -1.78
SYNE1-207ENST00000367255 DGUOKQ16854 277 aa3.91□□□□□ -1.78
SYNE1-207ENST00000367255 RANBP17Q9H2T7 1088 aaKnown RBP3.91□□□□□ -1.78
SYNE1-207ENST00000367255 NEK6Q9HC98 313 aa3.91□□□□□ -1.78
SYNE1-207ENST00000367255 PTPN4P29074 926 aa3.91□□□□□ -1.78
SYNE1-207ENST00000367255 TTC23Q5W5X9 447 aa3.91□□□□□ -1.78
SYNE1-207ENST00000367255 FAM167AQ96KS9 214 aa3.91□□□□□ -1.78
SYNE1-207ENST00000367255 GMIPQ9P107 970 aa3.91□□□□□ -1.78
SYNE1-207ENST00000367255 RANBP6O60518 1105 aaKnown RBP3.91□□□□□ -1.78
SYNE1-207ENST00000367255 CCNE1P24864 410 aa3.91□□□□□ -1.78
SYNE1-207ENST00000367255 MAGEA1P43355 309 aa3.91□□□□□ -1.78
SYNE1-207ENST00000367255 MAP10Q9P2G4 905 aa3.91□□□□□ -1.78
SYNE1-207ENST00000367255 SFNP31947 248 aa3.91□□□□□ -1.78
SYNE1-207ENST00000367255 IFNGR2P38484 337 aa3.91□□□□□ -1.78
SYNE1-207ENST00000367255 TGM4P49221 684 aa3.91□□□□□ -1.78
SYNE1-207ENST00000367255 KCNV1Q6PIU1 500 aa3.91□□□□□ -1.78
SYNE1-207ENST00000367255 LRRC20Q8TCA0 184 aa3.91□□□□□ -1.78
SYNE1-207ENST00000367255 PCYOX1Q9UHG3 505 aa3.91□□□□□ -1.78
SYNE1-207ENST00000367255 ATG7O95352 703 aa3.9□□□□□ -1.78
SYNE1-207ENST00000367255 SLC2A3P11169 496 aa3.9□□□□□ -1.78
SYNE1-207ENST00000367255 TCN1P20061 433 aaPredicted RBP3.9□□□□□ -1.78
SYNE1-207ENST00000367255 ADD1P35611 737 aaKnown RBP3.9□□□□□ -1.78
SYNE1-207ENST00000367255 SNRNP48Q6IEG0 339 aaKnown RBP3.9□□□□□ -1.78
SYNE1-207ENST00000367255 LVRNQ6Q4G3 990 aa3.9□□□□□ -1.78
SYNE1-207ENST00000367255 ING2Q9H160 280 aa3.9□□□□□ -1.78
SYNE1-207ENST00000367255 TRPM5Q9NZQ8 1165 aa3.9□□□□□ -1.78
SYNE1-207ENST00000367255 ARHGEF15O94989 841 aa3.9□□□□□ -1.78
SYNE1-207ENST00000367255 ZIK1Q3SY52 487 aaPredicted RBP3.9□□□□□ -1.78
SYNE1-207ENST00000367255 SPATA4Q8NEY3 305 aa3.9□□□□□ -1.78
SYNE1-207ENST00000367255 CABLES1Q8TDN4 633 aa3.9□□□□□ -1.78
SYNE1-207ENST00000367255 ACAD9Q9H845 621 aa3.9□□□□□ -1.78
SYNE1-207ENST00000367255 PALLDQ8WX93 1383 aa3.9□□□□□ -1.78
SYNE1-207ENST00000367255 SNX4O95219 450 aa3.9□□□□□ -1.78
SYNE1-207ENST00000367255 IFNA7P01567 189 aa3.9□□□□□ -1.78
SYNE1-207ENST00000367255 SULT2A1Q06520 285 aa3.9□□□□□ -1.78
SYNE1-207ENST00000367255 ZNF33BQ06732 778 aa3.9□□□□□ -1.78
SYNE1-207ENST00000367255 VANGL2Q9ULK5 521 aa3.9□□□□□ -1.78
SYNE1-207ENST00000367255 SLC30A1Q9Y6M5 507 aa3.9□□□□□ -1.78
SYNE1-207ENST00000367255 USP6P35125 1406 aa3.9□□□□□ -1.78
SYNE1-207ENST00000367255 SLC12A2P55011 1212 aa3.9□□□□□ -1.78
SYNE1-207ENST00000367255 LRRN4CLQ8ND94 238 aa3.9□□□□□ -1.78
SYNE1-207ENST00000367255 THAP11Q96EK4 314 aa3.9□□□□□ -1.78
SYNE1-207ENST00000367255 SPANXDQ9BXN6 97 aa3.9□□□□□ -1.78
SYNE1-207ENST00000367255 DDX28Q9NUL7 540 aaKnown RBP3.9□□□□□ -1.78
SYNE1-207ENST00000367255 TEX51A0A1B0GUA7 166 aa3.9□□□□□ -1.78
SYNE1-207ENST00000367255 HTR3EA5X5Y0 456 aa3.9□□□□□ -1.78
SYNE1-207ENST00000367255 TLL1O43897 1013 aa3.9□□□□□ -1.78
SYNE1-207ENST00000367255 KRT40Q6A162 431 aa3.9□□□□□ -1.78
SYNE1-207ENST00000367255 SYT2Q8N9I0 419 aaPredicted RBP3.9□□□□□ -1.78
SYNE1-207ENST00000367255 ELMO3Q96BJ8 720 aa3.9□□□□□ -1.78
SYNE1-207ENST00000367255 ADNPQ9H2P0 1102 aa3.9□□□□□ -1.78
SYNE1-207ENST00000367255 ITSN2Q9NZM3 1697 aa3.9□□□□□ -1.78
SYNE1-207ENST00000367255 TUBAL3A6NHL2 446 aa3.9□□□□□ -1.78
SYNE1-207ENST00000367255 RAB27AP51159 221 aa3.9□□□□□ -1.78
SYNE1-207ENST00000367255 HNRNPFP52597 415 aaKnown RBP3.9□□□□□ -1.78
SYNE1-207ENST00000367255 HIC1Q14526 733 aa3.9□□□□□ -1.78
SYNE1-207ENST00000367255 CHRNA2Q15822 529 aa3.9□□□□□ -1.78
SYNE1-207ENST00000367255 GDPGP1Q6ZNW5 385 aa3.9□□□□□ -1.78
SYNE1-207ENST00000367255 ALG1Q9BT22 464 aa3.9□□□□□ -1.78
SYNE1-207ENST00000367255 C1orf21Q9H246 121 aa3.9□□□□□ -1.78
SYNE1-207ENST00000367255 KAT14Q9H8E8 782 aa3.9□□□□□ -1.78
SYNE1-207ENST00000367255 TRAF6Q9Y4K3 522 aa3.9□□□□□ -1.78
SYNE1-207ENST00000367255 RPL4P36578 427 aaKnown RBP3.9□□□□□ -1.78
SYNE1-207ENST00000367255 GMPSP49915 693 aaPredicted RBP3.9□□□□□ -1.78
SYNE1-207ENST00000367255 LIMK1P53667 647 aa3.9□□□□□ -1.78
SYNE1-207ENST00000367255 KCNA1Q09470 495 aa3.9□□□□□ -1.78
SYNE1-207ENST00000367255 NR5A1Q13285 461 aa3.9□□□□□ -1.78
SYNE1-207ENST00000367255 MTFR1Q15390 333 aa3.9□□□□□ -1.78
SYNE1-207ENST00000367255 CNKSR1Q969H4 720 aa3.9□□□□□ -1.78
SYNE1-207ENST00000367255 LENG1Q96BZ8 264 aaPredicted RBP3.9□□□□□ -1.78
SYNE1-207ENST00000367255 MBIPQ9NS73 344 aa3.9□□□□□ -1.78
SYNE1-207ENST00000367255 STK32BQ9NY57 414 aa3.9□□□□□ -1.78
SYNE1-207ENST00000367255 SPANXCQ9NY87 97 aa3.9□□□□□ -1.78
SYNE1-207ENST00000367255 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.9□□□□□ -1.78
SYNE1-207ENST00000367255 FAM189A1O60320 539 aa3.9□□□□□ -1.78
SYNE1-207ENST00000367255 TTLL1O95922 423 aa3.9□□□□□ -1.78
SYNE1-207ENST00000367255 FBXO31Q5XUX0 539 aaPredicted RBP3.9□□□□□ -1.78
SYNE1-207ENST00000367255 SIX6OS1Q8N1H7 587 aa3.9□□□□□ -1.78
SYNE1-207ENST00000367255 NCKIPSDQ9NZQ3 722 aa3.9□□□□□ -1.78
SYNE1-207ENST00000367255 ADGRG1Q9Y653 693 aa3.9□□□□□ -1.78
SYNE1-207ENST00000367255 PLEKHG3A1L390 1219 aa3.9□□□□□ -1.78
SYNE1-207ENST00000367255 ENO1P06733 434 aaKnown RBP3.9□□□□□ -1.78
SYNE1-207ENST00000367255 MLH1P40692 756 aa3.9□□□□□ -1.78
SYNE1-207ENST00000367255 TMEM67Q5HYA8 995 aa3.9□□□□□ -1.78
SYNE1-207ENST00000367255 SH3RF3Q8TEJ3 882 aaPredicted RBP3.9□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms