RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 PON2Q15165 354 aa15.89■□□□□ 0.13
CTSD-202ENST00000367196 SNRNP35Q16560 246 aaKnown RBP15.89■□□□□ 0.13
CTSD-202ENST00000367196 LMBRD2Q68DH5 695 aaPredicted RBP15.89■□□□□ 0.13
CTSD-202ENST00000367196 VSTM1Q6UX27 236 aa15.89■□□□□ 0.13
CTSD-202ENST00000367196 UNC13DQ70J99 1090 aa15.89■□□□□ 0.13
CTSD-202ENST00000367196 CBWD2Q8IUF1 395 aa15.89■□□□□ 0.13
CTSD-202ENST00000367196 GPIHBP1Q8IV16 184 aa15.89■□□□□ 0.13
CTSD-202ENST00000367196 ZNF507Q8TCN5 953 aa15.89■□□□□ 0.13
CTSD-202ENST00000367196 MYRFLQ96LU7 910 aa15.89■□□□□ 0.13
CTSD-202ENST00000367196 LRRC3BQ96PB8 259 aa15.89■□□□□ 0.13
CTSD-202ENST00000367196 PKMYT1Q99640 499 aa15.89■□□□□ 0.13
CTSD-202ENST00000367196 C7orf25Q9BPX7 421 aa15.89■□□□□ 0.13
CTSD-202ENST00000367196 TFIP11Q9UBB9 837 aaKnown RBP15.89■□□□□ 0.13
CTSD-202ENST00000367196 GTF3C4Q9UKN8 822 aa15.89■□□□□ 0.13
CTSD-202ENST00000367196 CACNA1AO00555 2505 aa15.89■□□□□ 0.13
CTSD-202ENST00000367196 CEP250Q9BV73 2442 aa15.88■□□□□ 0.13
CTSD-202ENST00000367196 ZSCAN22P10073 491 aaPredicted RBP15.88■□□□□ 0.13
CTSD-202ENST00000367196 TNNI1P19237 187 aa15.88■□□□□ 0.13
CTSD-202ENST00000367196 CYP2F1P24903 491 aa15.88■□□□□ 0.13
CTSD-202ENST00000367196 ANXA13P27216 316 aa15.88■□□□□ 0.13
CTSD-202ENST00000367196 GPR15P49685 360 aa15.88■□□□□ 0.13
CTSD-202ENST00000367196 SATB1Q01826 763 aa15.88■□□□□ 0.13
CTSD-202ENST00000367196 LMNB2Q03252 620 aa15.88■□□□□ 0.13
CTSD-202ENST00000367196 TNK2Q07912 1038 aa15.88■□□□□ 0.13
CTSD-202ENST00000367196 GRSF1Q12849 480 aaKnown RBP eCLIP15.88■□□□□ 0.13
CTSD-202ENST00000367196 CCINQ13939 588 aa15.88■□□□□ 0.13
CTSD-202ENST00000367196 PDGFRLQ15198 375 aa15.88■□□□□ 0.13
CTSD-202ENST00000367196 DDR2Q16832 855 aa15.88■□□□□ 0.13
CTSD-202ENST00000367196 SOWAHAQ2M3V2 549 aa15.88■□□□□ 0.13
CTSD-202ENST00000367196 TXNDC8Q6A555 127 aa15.88■□□□□ 0.13
CTSD-202ENST00000367196 LAIR1Q6GTX8 287 aa15.88■□□□□ 0.13
CTSD-202ENST00000367196 SHC4Q6S5L8 630 aa15.88■□□□□ 0.13
CTSD-202ENST00000367196 EPM2AIP1Q7L775 607 aaPredicted RBP15.88■□□□□ 0.13
CTSD-202ENST00000367196 DGLUCYQ7Z3D6 616 aa15.88■□□□□ 0.13
CTSD-202ENST00000367196 TMEM150AQ86TG1 271 aa15.88■□□□□ 0.13
CTSD-202ENST00000367196 DCLK2Q8N568 766 aa15.88■□□□□ 0.13
CTSD-202ENST00000367196 XXYLT1Q8NBI6 393 aa15.88■□□□□ 0.13
CTSD-202ENST00000367196 TTC8Q8TAM2 541 aa15.88■□□□□ 0.13
CTSD-202ENST00000367196 USP13Q92995 863 aaPredicted RBP15.88■□□□□ 0.13
CTSD-202ENST00000367196 RMDN1Q96DB5 314 aa15.88■□□□□ 0.13
CTSD-202ENST00000367196 SYT15Q9BQS2 421 aa15.88■□□□□ 0.13
CTSD-202ENST00000367196 SMG9Q9H0W8 520 aaKnown RBP15.88■□□□□ 0.13
CTSD-202ENST00000367196 AGPAT3Q9NRZ7 376 aa15.88■□□□□ 0.13
CTSD-202ENST00000367196 GKN1Q9NS71 199 aa15.88■□□□□ 0.13
CTSD-202ENST00000367196 MAGEC2Q9UBF1 373 aaPredicted RBP15.88■□□□□ 0.13
CTSD-202ENST00000367196 CFAP45Q9UL16 551 aa15.88■□□□□ 0.13
CTSD-202ENST00000367196 TRAV19A0A0A6YYK7 116 aa15.87■□□□□ 0.13
CTSD-202ENST00000367196 PVALEFA0A1B0GWK0 134 aa15.87■□□□□ 0.13
CTSD-202ENST00000367196 PRR5-ARHGAP8B1AHC4 643 aa15.87■□□□□ 0.13
CTSD-202ENST00000367196 POLR2DO15514 142 aaKnown RBP15.87■□□□□ 0.13
CTSD-202ENST00000367196 ATG13O75143 517 aa15.87■□□□□ 0.13
CTSD-202ENST00000367196 F13A1P00488 732 aa15.87■□□□□ 0.13
CTSD-202ENST00000367196 CKMP06732 381 aa15.87■□□□□ 0.13
CTSD-202ENST00000367196 USP17L7P0C7H9 530 aa15.87■□□□□ 0.13
CTSD-202ENST00000367196 DLATP10515 647 aaKnown RBP15.87■□□□□ 0.13
CTSD-202ENST00000367196 PFKLP17858 780 aa15.87■□□□□ 0.13
CTSD-202ENST00000367196 WARSP23381 471 aaKnown RBP15.87■□□□□ 0.13
CTSD-202ENST00000367196 ME1P48163 572 aa15.87■□□□□ 0.13
CTSD-202ENST00000367196 TNNC1P63316 161 aa15.87■□□□□ 0.13
CTSD-202ENST00000367196 ARHGAP8P85298 464 aa15.87■□□□□ 0.13
CTSD-202ENST00000367196 FAM160A1Q05DH4 1040 aa15.87■□□□□ 0.13
CTSD-202ENST00000367196 RUNX3Q13761 415 aa15.87■□□□□ 0.13
CTSD-202ENST00000367196 PSMD6Q15008 389 aa15.87■□□□□ 0.13
CTSD-202ENST00000367196 FAM171BQ6P995 826 aa15.87■□□□□ 0.13
CTSD-202ENST00000367196 TXNDC11Q6PKC3 985 aa15.87■□□□□ 0.13
CTSD-202ENST00000367196 PRR23BQ6ZRT6 265 aa15.87■□□□□ 0.13
CTSD-202ENST00000367196 LONP2Q86WA8 852 aa15.87■□□□□ 0.13
CTSD-202ENST00000367196 SCN4BQ8IWT1 228 aa15.87■□□□□ 0.13
CTSD-202ENST00000367196 CEP57L1Q8IYX8 460 aa15.87■□□□□ 0.13
CTSD-202ENST00000367196 CPA6Q8N4T0 437 aa15.87■□□□□ 0.13
CTSD-202ENST00000367196 OR5B17Q8NGF7 314 aa15.87■□□□□ 0.13
CTSD-202ENST00000367196 GOLGA5Q8TBA6 731 aa15.87■□□□□ 0.13
CTSD-202ENST00000367196 HPS3Q969F9 1004 aa15.87■□□□□ 0.13
CTSD-202ENST00000367196 SPATA17Q96L03 361 aa15.87■□□□□ 0.13
CTSD-202ENST00000367196 MMS19Q96T76 1030 aa15.87■□□□□ 0.13
CTSD-202ENST00000367196 CGRRF1Q99675 332 aa15.87■□□□□ 0.13
CTSD-202ENST00000367196 FAM83CQ9BQN1 747 aa15.87■□□□□ 0.13
CTSD-202ENST00000367196 TRPC7Q9HCX4 862 aa15.87■□□□□ 0.13
CTSD-202ENST00000367196 RBM12Q9NTZ6 932 aaKnown RBP15.87■□□□□ 0.13
CTSD-202ENST00000367196 DCHS1Q96JQ0 3298 aa15.87■□□□□ 0.13
CTSD-202ENST00000367196 TRIM66O15016 1216 aa15.86■□□□□ 0.13
CTSD-202ENST00000367196 LRP3O75074 770 aa15.86■□□□□ 0.13
CTSD-202ENST00000367196 FAM163BP0C2L3 166 aa15.86■□□□□ 0.13
CTSD-202ENST00000367196 HOXA6P31267 233 aa15.86■□□□□ 0.13
CTSD-202ENST00000367196 CYP2J2P51589 502 aa15.86■□□□□ 0.13
CTSD-202ENST00000367196 GAS6Q14393 721 aa15.86■□□□□ 0.13
CTSD-202ENST00000367196 KCNB1Q14721 858 aa15.86■□□□□ 0.13
CTSD-202ENST00000367196 MTF1Q14872 753 aa15.86■□□□□ 0.13
CTSD-202ENST00000367196 SDHAF4Q5VUM1 108 aa15.86■□□□□ 0.13
CTSD-202ENST00000367196 Q6ZS52 159 aa15.86■□□□□ 0.13
CTSD-202ENST00000367196 TRAPPC11Q7Z392 1133 aa15.86■□□□□ 0.13
CTSD-202ENST00000367196 LIMS2Q7Z4I7 341 aa15.86■□□□□ 0.13
CTSD-202ENST00000367196 OSTM1Q86WC4 334 aa15.86■□□□□ 0.13
CTSD-202ENST00000367196 GLIS3Q8NEA6 775 aa15.86■□□□□ 0.13
CTSD-202ENST00000367196 MYLPFQ96A32 169 aa15.86■□□□□ 0.13
CTSD-202ENST00000367196 SNX25Q9H3E2 840 aa15.86■□□□□ 0.13
CTSD-202ENST00000367196 USP18Q9UMW8 372 aa15.86■□□□□ 0.13
CTSD-202ENST00000367196 CCL26Q9Y258 94 aa15.86■□□□□ 0.13
CTSD-202ENST00000367196 PTPRJQ12913 1337 aa15.86■□□□□ 0.13
CTSD-202ENST00000367196 WDR87Q6ZQQ6 2873 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms