RNA–Protein interactions for RNA: ENST00000366790.3

PARP1-201, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

TSL 2 BASIC

Gene PARP1, Length 570 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-201ENST00000366790 TADA3O75528 432 aa11.15□□□□□ -0.62
PARP1-201ENST00000366790 F13A1P00488 732 aa11.15□□□□□ -0.62
PARP1-201ENST00000366790 WARSP23381 471 aaKnown RBP11.15□□□□□ -0.62
PARP1-201ENST00000366790 CYP2F1P24903 491 aa11.15□□□□□ -0.62
PARP1-201ENST00000366790 HOXA6P31267 233 aa11.15□□□□□ -0.62
PARP1-201ENST00000366790 AVPR1AP37288 418 aa11.15□□□□□ -0.62
PARP1-201ENST00000366790 CXCL12P48061 93 aa11.15□□□□□ -0.62
PARP1-201ENST00000366790 SOX9P48436 509 aa11.15□□□□□ -0.62
PARP1-201ENST00000366790 CCINQ13939 588 aa11.15□□□□□ -0.62
PARP1-201ENST00000366790 PSMD6Q15008 389 aa11.15□□□□□ -0.62
PARP1-201ENST00000366790 ITPRIPL2Q3MIP1 535 aa11.15□□□□□ -0.62
PARP1-201ENST00000366790 WDR44Q5JSH3 913 aa11.15□□□□□ -0.62
PARP1-201ENST00000366790 TSSK4Q6SA08 328 aa11.15□□□□□ -0.62
PARP1-201ENST00000366790 C4orf50Q6ZRC1 276 aa11.15□□□□□ -0.62
PARP1-201ENST00000366790 TRAPPC11Q7Z392 1133 aa11.15□□□□□ -0.62
PARP1-201ENST00000366790 HSCBQ8IWL3 235 aa11.15□□□□□ -0.62
PARP1-201ENST00000366790 OR5B17Q8NGF7 314 aa11.15□□□□□ -0.62
PARP1-201ENST00000366790 SCFD1Q8WVM8 642 aa11.15□□□□□ -0.62
PARP1-201ENST00000366790 KBTBD7Q8WVZ9 684 aa11.15□□□□□ -0.62
PARP1-201ENST00000366790 USP13Q92995 863 aaPredicted RBP11.15□□□□□ -0.62
PARP1-201ENST00000366790 HPDLQ96IR7 371 aa11.15□□□□□ -0.62
PARP1-201ENST00000366790 ZFYVE19Q96K21 471 aa11.15□□□□□ -0.62
PARP1-201ENST00000366790 FAM84AQ96KN4 292 aa11.15□□□□□ -0.62
PARP1-201ENST00000366790 AGPAT3Q9NRZ7 376 aa11.15□□□□□ -0.62
PARP1-201ENST00000366790 TDP1Q9NUW8 608 aa11.15□□□□□ -0.62
PARP1-201ENST00000366790 GTSE1Q9NYZ3 720 aa11.15□□□□□ -0.62
PARP1-201ENST00000366790 GTF3C4Q9UKN8 822 aa11.15□□□□□ -0.62
PARP1-201ENST00000366790 CDH9Q9ULB4 789 aa11.15□□□□□ -0.62
PARP1-201ENST00000366790 SMG5Q9UPR3 1016 aaKnown RBP11.15□□□□□ -0.62
PARP1-201ENST00000366790 SPTBN2O15020 2390 aa11.14□□□□□ -0.63
PARP1-201ENST00000366790 DNAH14Q0VDD8 3507 aa11.14□□□□□ -0.63
PARP1-201ENST00000366790 ATG2BQ96BY7 2078 aa11.14□□□□□ -0.63
PARP1-201ENST00000366790 POLR2DO15514 142 aaKnown RBP11.14□□□□□ -0.63
PARP1-201ENST00000366790 TACC1O75410 805 aa11.14□□□□□ -0.63
PARP1-201ENST00000366790 STAU1O95793 577 aaKnown RBP11.14□□□□□ -0.63
PARP1-201ENST00000366790 TCF3P15923 654 aa11.14□□□□□ -0.63
PARP1-201ENST00000366790 PFKLP17858 780 aa11.14□□□□□ -0.63
PARP1-201ENST00000366790 ACAT1P24752 427 aaKnown RBP11.14□□□□□ -0.63
PARP1-201ENST00000366790 CNR2P34972 360 aa11.14□□□□□ -0.63
PARP1-201ENST00000366790 GPR15P49685 360 aa11.14□□□□□ -0.63
PARP1-201ENST00000366790 CYP24A1Q07973 514 aa11.14□□□□□ -0.63
PARP1-201ENST00000366790 MAPRE1Q15691 268 aaKnown RBP11.14□□□□□ -0.63
PARP1-201ENST00000366790 SNRNP35Q16560 246 aaKnown RBP11.14□□□□□ -0.63
PARP1-201ENST00000366790 DDR2Q16832 855 aa11.14□□□□□ -0.63
PARP1-201ENST00000366790 RESP18Q5W5W9 173 aa11.14□□□□□ -0.63
PARP1-201ENST00000366790 LMBRD2Q68DH5 695 aaPredicted RBP11.14□□□□□ -0.63
PARP1-201ENST00000366790 VSTM1Q6UX27 236 aa11.14□□□□□ -0.63
PARP1-201ENST00000366790 HS2ST1Q7LGA3 356 aa11.14□□□□□ -0.63
PARP1-201ENST00000366790 SPATA2LQ8IUW3 424 aaPredicted RBP11.14□□□□□ -0.63
PARP1-201ENST00000366790 GPIHBP1Q8IV16 184 aa11.14□□□□□ -0.63
PARP1-201ENST00000366790 MAB21L3Q8N8X9 362 aa11.14□□□□□ -0.63
PARP1-201ENST00000366790 XXYLT1Q8NBI6 393 aa11.14□□□□□ -0.63
PARP1-201ENST00000366790 NOC3LQ8WTT2 800 aaKnown RBP11.14□□□□□ -0.63
PARP1-201ENST00000366790 TMEM174Q8WUU8 243 aa11.14□□□□□ -0.63
PARP1-201ENST00000366790 SECISBP2LQ93073 1101 aaKnown RBP11.14□□□□□ -0.63
PARP1-201ENST00000366790 SPATA17Q96L03 361 aa11.14□□□□□ -0.63
PARP1-201ENST00000366790 CGRRF1Q99675 332 aa11.14□□□□□ -0.63
PARP1-201ENST00000366790 HINFPQ9BQA5 517 aa11.14□□□□□ -0.63
PARP1-201ENST00000366790 SYT15Q9BQS2 421 aa11.14□□□□□ -0.63
PARP1-201ENST00000366790 GKN1Q9NS71 199 aa11.14□□□□□ -0.63
PARP1-201ENST00000366790 FAM13BQ9NYF5 915 aa11.14□□□□□ -0.63
PARP1-201ENST00000366790 RCOR1Q9UKL0 485 aa11.14□□□□□ -0.63
PARP1-201ENST00000366790 CFAP45Q9UL16 551 aa11.14□□□□□ -0.63
PARP1-201ENST00000366790 PCDHA7Q9UN72 937 aa11.14□□□□□ -0.63
PARP1-201ENST00000366790 NCOR2Q9Y618 2525 aa11.14□□□□□ -0.63
PARP1-201ENST00000366790 SDK1Q7Z5N4 2213 aa11.13□□□□□ -0.63
PARP1-201ENST00000366790 HELZP42694 1942 aaKnown RBP11.13□□□□□ -0.63
PARP1-201ENST00000366790 RALGAPA1Q6GYQ0 2036 aa11.13□□□□□ -0.63
PARP1-201ENST00000366790 K7ESF4 209 aa11.13□□□□□ -0.63
PARP1-201ENST00000366790 TRDMT1O14717 391 aaKnown RBP11.13□□□□□ -0.63
PARP1-201ENST00000366790 CDR1P51861 262 aa11.13□□□□□ -0.63
PARP1-201ENST00000366790 AMPD2Q01433 879 aa11.13□□□□□ -0.63
PARP1-201ENST00000366790 SATB1Q01826 763 aa11.13□□□□□ -0.63
PARP1-201ENST00000366790 FAM160A1Q05DH4 1040 aa11.13□□□□□ -0.63
PARP1-201ENST00000366790 TNK2Q07912 1038 aa11.13□□□□□ -0.63
PARP1-201ENST00000366790 RUNX3Q13761 415 aa11.13□□□□□ -0.63
PARP1-201ENST00000366790 PUM1Q14671 1186 aaKnown RBP eCLIP11.13□□□□□ -0.635e-12■□□□□ 10.2
PARP1-201ENST00000366790 PON2Q15165 354 aa11.13□□□□□ -0.63
PARP1-201ENST00000366790 PDGFRLQ15198 375 aa11.13□□□□□ -0.63
PARP1-201ENST00000366790 SDHAF4Q5VUM1 108 aa11.13□□□□□ -0.63
PARP1-201ENST00000366790 TXNDC8Q6A555 127 aa11.13□□□□□ -0.63
PARP1-201ENST00000366790 KIAA2013Q8IYS2 634 aa11.13□□□□□ -0.63
PARP1-201ENST00000366790 DCLK2Q8N568 766 aa11.13□□□□□ -0.63
PARP1-201ENST00000366790 KIAA1958Q8N8K9 716 aa11.13□□□□□ -0.63
PARP1-201ENST00000366790 GOLGA5Q8TBA6 731 aa11.13□□□□□ -0.63
PARP1-201ENST00000366790 RMDN1Q96DB5 314 aa11.13□□□□□ -0.63
PARP1-201ENST00000366790 FNBP1Q96RU3 617 aa11.13□□□□□ -0.63
PARP1-201ENST00000366790 SMG9Q9H0W8 520 aaKnown RBP11.13□□□□□ -0.63
PARP1-201ENST00000366790 CRTAC1Q9NQ79 661 aa11.13□□□□□ -0.63
PARP1-201ENST00000366790 HPS4Q9NQG7 708 aa11.13□□□□□ -0.63
PARP1-201ENST00000366790 RBM12Q9NTZ6 932 aaKnown RBP11.13□□□□□ -0.63
PARP1-201ENST00000366790 DLL3Q9NYJ7 618 aa11.13□□□□□ -0.63
PARP1-201ENST00000366790 NCDNQ9UBB6 729 aa11.13□□□□□ -0.63
PARP1-201ENST00000366790 MAGEC2Q9UBF1 373 aaPredicted RBP11.13□□□□□ -0.63
PARP1-201ENST00000366790 MAGED2Q9UNF1 606 aaPredicted RBP11.13□□□□□ -0.63
PARP1-201ENST00000366790 CCL26Q9Y258 94 aa11.13□□□□□ -0.63
PARP1-201ENST00000366790 TRAV19A0A0A6YYK7 116 aa11.12□□□□□ -0.63
PARP1-201ENST00000366790 CLIC2O15247 247 aa11.12□□□□□ -0.63
PARP1-201ENST00000366790 HCRTO43612 131 aa11.12□□□□□ -0.63
PARP1-201ENST00000366790 ATP2C2O75185 946 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms