RNA–Protein interactions for RNA: ENST00000366735.5

MRPL55-209, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-209ENST00000366735 MORC2Q9Y6X9 1032 aaPredicted RBP13.34□□□□□ -0.27
MRPL55-209ENST00000366735 HRO43593 1189 aa13.33□□□□□ -0.28
MRPL55-209ENST00000366735 HUS1O60921 280 aa13.33□□□□□ -0.28
MRPL55-209ENST00000366735 RPP40O75818 363 aaKnown RBP13.33□□□□□ -0.28
MRPL55-209ENST00000366735 AKAP3O75969 853 aa13.33□□□□□ -0.28
MRPL55-209ENST00000366735 ADRB1P08588 477 aa13.33□□□□□ -0.28
MRPL55-209ENST00000366735 RPL10AP62906 217 aaKnown RBP13.33□□□□□ -0.28
MRPL55-209ENST00000366735 TNK2Q07912 1038 aa13.33□□□□□ -0.28
MRPL55-209ENST00000366735 RUNX3Q13761 415 aa13.33□□□□□ -0.28
MRPL55-209ENST00000366735 ZNF268Q14587 947 aaPredicted RBP13.33□□□□□ -0.28
MRPL55-209ENST00000366735 PDGFRLQ15198 375 aa13.33□□□□□ -0.28
MRPL55-209ENST00000366735 FBXO43Q4G163 708 aa13.33□□□□□ -0.28
MRPL55-209ENST00000366735 ZC2HC1CQ53FD0 456 aaPredicted RBP13.33□□□□□ -0.28
MRPL55-209ENST00000366735 PPM1JQ5JR12 505 aa13.33□□□□□ -0.28
MRPL55-209ENST00000366735 WSCD1Q658N2 575 aa13.33□□□□□ -0.28
MRPL55-209ENST00000366735 CACNA2D4Q7Z3S7 1137 aa13.33□□□□□ -0.28
MRPL55-209ENST00000366735 SFR1Q86XK3 245 aa13.33□□□□□ -0.28
MRPL55-209ENST00000366735 TMEM86AQ8N2M4 240 aa13.33□□□□□ -0.28
MRPL55-209ENST00000366735 CPA6Q8N4T0 437 aa13.33□□□□□ -0.28
MRPL55-209ENST00000366735 FAM160A2Q8N612 972 aaPredicted RBP13.33□□□□□ -0.28
MRPL55-209ENST00000366735 MAB21L3Q8N8X9 362 aa13.33□□□□□ -0.28
MRPL55-209ENST00000366735 LINC00301Q8NCQ3 95 aa13.33□□□□□ -0.28
MRPL55-209ENST00000366735 CCDC26Q8TAB7 109 aa13.33□□□□□ -0.28
MRPL55-209ENST00000366735 SPATA18Q8TC71 538 aa13.33□□□□□ -0.28
MRPL55-209ENST00000366735 TMC2Q8TDI7 906 aa13.33□□□□□ -0.28
MRPL55-209ENST00000366735 GAB3Q8WWW8 586 aa13.33□□□□□ -0.28
MRPL55-209ENST00000366735 CNTNAP3BQ96NU0 1288 aa13.33□□□□□ -0.28
MRPL55-209ENST00000366735 PHF12Q96QT6 1004 aa13.33□□□□□ -0.28
MRPL55-209ENST00000366735 ACCSQ96QU6 501 aa13.33□□□□□ -0.28
MRPL55-209ENST00000366735 FIZ1Q96SL8 496 aa13.33□□□□□ -0.28
MRPL55-209ENST00000366735 REPIN1Q9BWE0 567 aaKnown RBP13.33□□□□□ -0.28
MRPL55-209ENST00000366735 CNTNAP3Q9BZ76 1288 aa13.33□□□□□ -0.28
MRPL55-209ENST00000366735 MRPL44Q9H9J2 332 aaKnown RBP13.33□□□□□ -0.28
MRPL55-209ENST00000366735 ABCB6Q9NP58 842 aa13.33□□□□□ -0.28
MRPL55-209ENST00000366735 TDP1Q9NUW8 608 aa13.33□□□□□ -0.28
MRPL55-209ENST00000366735 MAGED2Q9UNF1 606 aaPredicted RBP13.33□□□□□ -0.28
MRPL55-209ENST00000366735 ANKRD63C9JTQ0 380 aa13.32□□□□□ -0.28
MRPL55-209ENST00000366735 DRD1P21728 446 aa13.32□□□□□ -0.28
MRPL55-209ENST00000366735 PDE6CP51160 858 aa13.32□□□□□ -0.28
MRPL55-209ENST00000366735 NLRP12P59046 1061 aa13.32□□□□□ -0.28
MRPL55-209ENST00000366735 TFAMQ00059 246 aaKnown RBP13.32□□□□□ -0.28
MRPL55-209ENST00000366735 DMWDQ09019 674 aa13.32□□□□□ -0.28
MRPL55-209ENST00000366735 SLC39A14Q15043 492 aa13.32□□□□□ -0.28
MRPL55-209ENST00000366735 SF3A1Q15459 793 aaKnown RBP13.32□□□□□ -0.28
MRPL55-209ENST00000366735 TMEM196Q5HYL7 178 aa13.32□□□□□ -0.28
MRPL55-209ENST00000366735 ZNF720Q7Z2F6 126 aa13.32□□□□□ -0.28
MRPL55-209ENST00000366735 PLPP6Q8IY26 295 aa13.32□□□□□ -0.28
MRPL55-209ENST00000366735 EFCAB13Q8IY85 973 aa13.32□□□□□ -0.28
MRPL55-209ENST00000366735 LRRC52Q8N7C0 313 aa13.32□□□□□ -0.28
MRPL55-209ENST00000366735 FSIP1Q8NA03 581 aa13.32□□□□□ -0.28
MRPL55-209ENST00000366735 SLC46A2Q9BY10 475 aa13.32□□□□□ -0.28
MRPL55-209ENST00000366735 TMEM206Q9H813 350 aa13.32□□□□□ -0.28
MRPL55-209ENST00000366735 GKN1Q9NS71 199 aa13.32□□□□□ -0.28
MRPL55-209ENST00000366735 ITGA11Q9UKX5 1188 aa13.32□□□□□ -0.28
MRPL55-209ENST00000366735 CLIC4Q9Y696 253 aa13.32□□□□□ -0.28
MRPL55-209ENST00000366735 MYH10P35580 1976 aa13.32□□□□□ -0.28
MRPL55-209ENST00000366735 THADAQ6YHU6 1953 aa13.32□□□□□ -0.28
MRPL55-209ENST00000366735 CACNA1BQ00975 2339 aa13.31□□□□□ -0.28
MRPL55-209ENST00000366735 NCOR2Q9Y618 2525 aa13.31□□□□□ -0.28
MRPL55-209ENST00000366735 TRDMT1O14717 391 aaKnown RBP13.31□□□□□ -0.28
MRPL55-209ENST00000366735 GCNT3O95395 438 aa13.31□□□□□ -0.28
MRPL55-209ENST00000366735 ITGB3P05106 788 aa13.31□□□□□ -0.28
MRPL55-209ENST00000366735 TMEM191BP0C7N4 346 aa13.31□□□□□ -0.28
MRPL55-209ENST00000366735 GARTP22102 1010 aa13.31□□□□□ -0.28
MRPL55-209ENST00000366735 PCSK1P29120 753 aa13.31□□□□□ -0.28
MRPL55-209ENST00000366735 POLR2BP30876 1174 aaKnown RBP13.31□□□□□ -0.28
MRPL55-209ENST00000366735 LIMK1P53667 647 aa13.31□□□□□ -0.28
MRPL55-209ENST00000366735 FAM160A1Q05DH4 1040 aa13.31□□□□□ -0.28
MRPL55-209ENST00000366735 SRSF5Q13243 272 aaKnown RBP13.31□□□□□ -0.28
MRPL55-209ENST00000366735 INTS6LQ5JSJ4 861 aaKnown RBP13.31□□□□□ -0.28
MRPL55-209ENST00000366735 L1TD1Q5T7N2 865 aaKnown RBP13.31□□□□□ -0.28
MRPL55-209ENST00000366735 RRAGBQ5VZM2 374 aa13.31□□□□□ -0.28
MRPL55-209ENST00000366735 SV2BQ7L1I2 683 aa13.31□□□□□ -0.28
MRPL55-209ENST00000366735 DYMQ7RTS9 669 aa13.31□□□□□ -0.28
MRPL55-209ENST00000366735 BRSK2Q8IWQ3 736 aa13.31□□□□□ -0.28
MRPL55-209ENST00000366735 SYCP3Q8IZU3 236 aa13.31□□□□□ -0.28
MRPL55-209ENST00000366735 CAMKK1Q8N5S9 505 aa13.31□□□□□ -0.28
MRPL55-209ENST00000366735 ATP2A3Q93084 1043 aa13.31□□□□□ -0.28
MRPL55-209ENST00000366735 SYAP1Q96A49 352 aaPredicted RBP13.31□□□□□ -0.28
MRPL55-209ENST00000366735 ACDQ96AP0 544 aa13.31□□□□□ -0.28
MRPL55-209ENST00000366735 TRMT2BQ96GJ1 504 aaKnown RBP13.31□□□□□ -0.28
MRPL55-209ENST00000366735 LRRC3BQ96PB8 259 aa13.31□□□□□ -0.28
MRPL55-209ENST00000366735 FAM83CQ9BQN1 747 aa13.31□□□□□ -0.28
MRPL55-209ENST00000366735 ACBD6Q9BR61 282 aa13.31□□□□□ -0.28
MRPL55-209ENST00000366735 FAM213AQ9BRX8 229 aa13.31□□□□□ -0.28
MRPL55-209ENST00000366735 PI4K2AQ9BTU6 479 aa13.31□□□□□ -0.28
MRPL55-209ENST00000366735 SMG9Q9H0W8 520 aaKnown RBP13.31□□□□□ -0.28
MRPL55-209ENST00000366735 EBF3Q9H4W6 596 aa13.31□□□□□ -0.28
MRPL55-209ENST00000366735 DDX43Q9NXZ2 648 aaKnown RBP13.31□□□□□ -0.28
MRPL55-209ENST00000366735 RBAKQ9NYW8 714 aaPredicted RBP13.31□□□□□ -0.28
MRPL55-209ENST00000366735 PCDHGA5Q9Y5G8 931 aa13.31□□□□□ -0.28
MRPL55-209ENST00000366735 TRAV19A0A0A6YYK7 116 aa13.3□□□□□ -0.28
MRPL55-209ENST00000366735 A0A1W2PQ27 194 aa13.3□□□□□ -0.28
MRPL55-209ENST00000366735 A0A1W2PQ64 194 aa13.3□□□□□ -0.28
MRPL55-209ENST00000366735 A0A1W2PQD8 194 aa13.3□□□□□ -0.28
MRPL55-209ENST00000366735 GOLGA6L4A6NEF3 574 aa13.3□□□□□ -0.28
MRPL55-209ENST00000366735 TISP43B9A030 160 aa13.3□□□□□ -0.28
MRPL55-209ENST00000366735 KIAA0391O15091 583 aaKnown RBP13.3□□□□□ -0.28
MRPL55-209ENST00000366735 SPTLC2O15270 562 aa13.3□□□□□ -0.28
MRPL55-209ENST00000366735 PPP6R2O75170 966 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms