RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 ADAMTS18Q8TE60 1221 aa0.45□□□□□ -2.34
RNU6-54P-201ENST00000365563 OIT3Q8WWZ8 545 aa0.45□□□□□ -2.34
RNU6-54P-201ENST00000365563 RTF1Q92541 710 aaKnown RBP0.45□□□□□ -2.34
RNU6-54P-201ENST00000365563 MAP4K1Q92918 833 aa0.45□□□□□ -2.34
RNU6-54P-201ENST00000365563 ZNF669Q96BR6 464 aaPredicted RBP0.45□□□□□ -2.34
RNU6-54P-201ENST00000365563 FAM136AQ96C01 138 aa0.45□□□□□ -2.34
RNU6-54P-201ENST00000365563 FBXO17Q96EF6 278 aa0.45□□□□□ -2.34
RNU6-54P-201ENST00000365563 UHRF2Q96PU4 802 aa0.45□□□□□ -2.34
RNU6-54P-201ENST00000365563 SMOQ99835 787 aa0.45□□□□□ -2.34
RNU6-54P-201ENST00000365563 MACROD1Q9BQ69 325 aa0.45□□□□□ -2.34
RNU6-54P-201ENST00000365563 ABHD16BQ9H3Z7 469 aa0.45□□□□□ -2.34
RNU6-54P-201ENST00000365563 CABP5Q9NP86 173 aa0.45□□□□□ -2.34
RNU6-54P-201ENST00000365563 THSD1Q9NS62 852 aa0.45□□□□□ -2.34
RNU6-54P-201ENST00000365563 TOMM22Q9NS69 142 aa0.45□□□□□ -2.34
RNU6-54P-201ENST00000365563 FAM120CQ9NX05 1096 aaKnown RBP0.45□□□□□ -2.34
RNU6-54P-201ENST00000365563 CTTNBP2NLQ9P2B4 639 aa0.45□□□□□ -2.34
RNU6-54P-201ENST00000365563 CLIP2Q9UDT6 1046 aa0.45□□□□□ -2.34
RNU6-54P-201ENST00000365563 PRKAG3Q9UGI9 489 aa0.45□□□□□ -2.34
RNU6-54P-201ENST00000365563 NDOR1Q9UHB4 597 aa0.45□□□□□ -2.34
RNU6-54P-201ENST00000365563 CCNL1Q9UK58 526 aaPredicted RBP0.45□□□□□ -2.34
RNU6-54P-201ENST00000365563 COL4A4P53420 1690 aaPredicted RBP0.45□□□□□ -2.34
RNU6-54P-201ENST00000365563 DVL2O14641 736 aa0.44□□□□□ -2.34
RNU6-54P-201ENST00000365563 KIAA0391O15091 583 aaKnown RBP0.44□□□□□ -2.34
RNU6-54P-201ENST00000365563 AKR1B10O60218 316 aa0.44□□□□□ -2.34
RNU6-54P-201ENST00000365563 ZNF500O60304 480 aaPredicted RBP0.44□□□□□ -2.34
RNU6-54P-201ENST00000365563 TJP3O95049 919 aa0.44□□□□□ -2.34
RNU6-54P-201ENST00000365563 SSBP05455 408 aaKnown RBP eCLIP0.44□□□□□ -2.34
RNU6-54P-201ENST00000365563 C6orf222P0C671 652 aaPredicted RBP0.44□□□□□ -2.34
RNU6-54P-201ENST00000365563 HOXB2P14652 356 aa0.44□□□□□ -2.34
RNU6-54P-201ENST00000365563 ITGALP20701 1170 aa0.44□□□□□ -2.34
RNU6-54P-201ENST00000365563 CD6P30203 668 aa0.44□□□□□ -2.34
RNU6-54P-201ENST00000365563 CPA2P48052 419 aa0.44□□□□□ -2.34
RNU6-54P-201ENST00000365563 HLCSP50747 726 aa0.44□□□□□ -2.34
RNU6-54P-201ENST00000365563 HSD17B4P51659 736 aa0.44□□□□□ -2.34
RNU6-54P-201ENST00000365563 RACK1P63244 317 aaKnown RBP0.44□□□□□ -2.34
RNU6-54P-201ENST00000365563 POU6F2P78424 691 aaPredicted RBP0.44□□□□□ -2.34
RNU6-54P-201ENST00000365563 FANCCQ00597 558 aa0.44□□□□□ -2.34
RNU6-54P-201ENST00000365563 MC2RQ01718 297 aa0.44□□□□□ -2.34
RNU6-54P-201ENST00000365563 PTGR1Q14914 329 aa0.44□□□□□ -2.34
RNU6-54P-201ENST00000365563 CNGA3Q16281 694 aa0.44□□□□□ -2.34
RNU6-54P-201ENST00000365563 TMTC4Q5T4D3 741 aa0.44□□□□□ -2.34
RNU6-54P-201ENST00000365563 STPG1Q5TH74 334 aa0.44□□□□□ -2.34
RNU6-54P-201ENST00000365563 EGFLAMQ63HQ2 1017 aa0.44□□□□□ -2.34
RNU6-54P-201ENST00000365563 TAPT1Q6NXT6 567 aa0.44□□□□□ -2.34
RNU6-54P-201ENST00000365563 ABHD17CQ6PCB6 329 aa0.44□□□□□ -2.34
RNU6-54P-201ENST00000365563 RAPH1Q70E73 1250 aa0.44□□□□□ -2.34
RNU6-54P-201ENST00000365563 CREB3L2Q70SY1 520 aa0.44□□□□□ -2.34
RNU6-54P-201ENST00000365563 HAPLN4Q86UW8 402 aa0.44□□□□□ -2.34
RNU6-54P-201ENST00000365563 PASD1Q8IV76 773 aa0.44□□□□□ -2.34
RNU6-54P-201ENST00000365563 C16orf71Q8IYS4 520 aaPredicted RBP0.44□□□□□ -2.34
RNU6-54P-201ENST00000365563 PQLC1Q8N2U9 271 aa0.44□□□□□ -2.34
RNU6-54P-201ENST00000365563 AOPEPQ8N6M6 819 aa0.44□□□□□ -2.34
RNU6-54P-201ENST00000365563 MAFAQ8NHW3 353 aaPredicted RBP0.44□□□□□ -2.34
RNU6-54P-201ENST00000365563 LPAR1Q92633 364 aa0.44□□□□□ -2.34
RNU6-54P-201ENST00000365563 CCDC17Q96LX7 622 aa0.44□□□□□ -2.34
RNU6-54P-201ENST00000365563 TLR10Q9BXR5 811 aa0.44□□□□□ -2.34
RNU6-54P-201ENST00000365563 CIPCQ9C0C6 399 aa0.44□□□□□ -2.34
RNU6-54P-201ENST00000365563 ZSWIM4Q9H7M6 989 aa0.44□□□□□ -2.34
RNU6-54P-201ENST00000365563 SDF2L1Q9HCN8 221 aa0.44□□□□□ -2.34
RNU6-54P-201ENST00000365563 CCDC177Q9NQR7 707 aaPredicted RBP0.44□□□□□ -2.34
RNU6-54P-201ENST00000365563 DNAJB11Q9UBS4 358 aa0.44□□□□□ -2.34
RNU6-54P-201ENST00000365563 EVLQ9UI08 416 aaPredicted RBP0.44□□□□□ -2.34
RNU6-54P-201ENST00000365563 PRSS50Q9UI38 385 aa0.44□□□□□ -2.34
RNU6-54P-201ENST00000365563 POU2F3Q9UKI9 436 aa0.44□□□□□ -2.34
RNU6-54P-201ENST00000365563 GAB2Q9UQC2 676 aa0.44□□□□□ -2.34
RNU6-54P-201ENST00000365563 SPO11Q9Y5K1 396 aa0.44□□□□□ -2.34
RNU6-54P-201ENST00000365563 CDY2AQ9Y6F7 541 aa0.44□□□□□ -2.34
RNU6-54P-201ENST00000365563 NUMBLQ9Y6R0 609 aa0.44□□□□□ -2.34
RNU6-54P-201ENST00000365563 TMEM272A0A1B0GTI8 110 aa0.43□□□□□ -2.34
RNU6-54P-201ENST00000365563 PTPDC1A2A3K4 754 aa0.43□□□□□ -2.34
RNU6-54P-201ENST00000365563 M0R2C6 588 aa0.43□□□□□ -2.34
RNU6-54P-201ENST00000365563 ELL2O00472 640 aaPredicted RBP0.43□□□□□ -2.34
RNU6-54P-201ENST00000365563 USP12O75317 370 aa0.43□□□□□ -2.34
RNU6-54P-201ENST00000365563 ENDOD1O94919 500 aa0.43□□□□□ -2.34
RNU6-54P-201ENST00000365563 NDUFB8O95169 186 aa0.43□□□□□ -2.34
RNU6-54P-201ENST00000365563 EPN2O95208 641 aa0.43□□□□□ -2.34
RNU6-54P-201ENST00000365563 PRSS2P07478 247 aa0.43□□□□□ -2.34
RNU6-54P-201ENST00000365563 SNRNP70P08621 437 aaKnown RBP0.43□□□□□ -2.34
RNU6-54P-201ENST00000365563 CD63P08962 238 aa0.43□□□□□ -2.34
RNU6-54P-201ENST00000365563 FGF2P09038 288 aa0.43□□□□□ -2.34
RNU6-54P-201ENST00000365563 SLC9A1P19634 815 aa0.43□□□□□ -2.34
RNU6-54P-201ENST00000365563 HOXA11P31270 313 aaPredicted RBP0.43□□□□□ -2.34
RNU6-54P-201ENST00000365563 GUCY1A2P33402 732 aa0.43□□□□□ -2.34
RNU6-54P-201ENST00000365563 MECP2P51608 486 aaKnown RBP0.43□□□□□ -2.34
RNU6-54P-201ENST00000365563 CLCN2P51788 898 aa0.43□□□□□ -2.34
RNU6-54P-201ENST00000365563 DSCR10P59022 87 aa0.43□□□□□ -2.34
RNU6-54P-201ENST00000365563 TAGLNQ01995 201 aaKnown RBP0.43□□□□□ -2.34
RNU6-54P-201ENST00000365563 PPP3CAQ08209 521 aa0.43□□□□□ -2.34
RNU6-54P-201ENST00000365563 GRIK2Q13002 908 aa0.43□□□□□ -2.34
RNU6-54P-201ENST00000365563 STIM1Q13586 685 aa0.43□□□□□ -2.34
RNU6-54P-201ENST00000365563 KCNC3Q14003 757 aa0.43□□□□□ -2.34
RNU6-54P-201ENST00000365563 LRRC32Q14392 662 aa0.43□□□□□ -2.34
RNU6-54P-201ENST00000365563 LPAL2Q16609 132 aa0.43□□□□□ -2.34
RNU6-54P-201ENST00000365563 INO80DQ53TQ3 878 aaPredicted RBP0.43□□□□□ -2.34
RNU6-54P-201ENST00000365563 ZNF484Q5JVG2 852 aa0.43□□□□□ -2.34
RNU6-54P-201ENST00000365563 ZBTB41Q5SVQ8 909 aa0.43□□□□□ -2.34
RNU6-54P-201ENST00000365563 RBM20Q5T481 1227 aaKnown RBP0.43□□□□□ -2.34
RNU6-54P-201ENST00000365563 H1FNTQ75WM6 255 aaPredicted RBP0.43□□□□□ -2.34
RNU6-54P-201ENST00000365563 SND1Q7KZF4 910 aaKnown RBP eCLIP0.43□□□□□ -2.34
RNU6-54P-201ENST00000365563 Q7L0L9 218 aa0.43□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms